RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 NR1I2O75469 434 aa22.8■■□□□ 1.24
CDH5-204ENST00000563425 CYP7A1P22680 504 aa22.8■■□□□ 1.24
CDH5-204ENST00000563425 METAP2P50579 478 aaKnown RBP eCLIP22.8■■□□□ 1.24
CDH5-204ENST00000563425 CEBPZQ03701 1054 aaKnown RBP22.8■■□□□ 1.24
CDH5-204ENST00000563425 CAMK4Q16566 473 aa22.8■■□□□ 1.24
CDH5-204ENST00000563425 NLRP3Q96P20 1036 aa22.8■■□□□ 1.24
CDH5-204ENST00000563425 KRT23Q9C075 422 aa22.8■■□□□ 1.24
CDH5-204ENST00000563425 LY9Q9HBG7 655 aa22.8■■□□□ 1.24
CDH5-204ENST00000563425 INCENPQ9NQS7 918 aa22.8■■□□□ 1.24
CDH5-204ENST00000563425 RPS8P62241 208 aaKnown RBP22.79■■□□□ 1.24
CDH5-204ENST00000563425 FAM182BQ5T319 152 aa22.79■■□□□ 1.24
CDH5-204ENST00000563425 MIGA1Q8NAN2 632 aa22.79■■□□□ 1.24
CDH5-204ENST00000563425 FAM84BQ96KN1 310 aaPredicted RBP22.79■■□□□ 1.24
CDH5-204ENST00000563425 FTOQ9C0B1 505 aaKnown RBP eCLIP22.79■■□□□ 1.24
CDH5-204ENST00000563425 SENP2Q9HC62 589 aa22.79■■□□□ 1.24
CDH5-204ENST00000563425 BAZ2AQ9UIF9 1905 aaKnown RBP22.79■■□□□ 1.24
CDH5-204ENST00000563425 CCDC88AQ3V6T2 1871 aa22.79■■□□□ 1.24
CDH5-204ENST00000563425 LIFRP42702 1097 aa22.78■■□□□ 1.24
CDH5-204ENST00000563425 TDO2P48775 406 aa22.78■■□□□ 1.24
CDH5-204ENST00000563425 TMEM67Q5HYA8 995 aa22.78■■□□□ 1.24
CDH5-204ENST00000563425 MFSD6Q6ZSS7 791 aa22.78■■□□□ 1.24
CDH5-204ENST00000563425 STAG1Q8WVM7 1258 aa22.78■■□□□ 1.24
CDH5-204ENST00000563425 ZSWIM5Q9P217 1185 aa22.78■■□□□ 1.24
CDH5-204ENST00000563425 CCDC39Q9UFE4 941 aa22.78■■□□□ 1.24
CDH5-204ENST00000563425 KDM4AO75164 1064 aa22.78■■□□□ 1.24
CDH5-204ENST00000563425 CDKL5O76039 1030 aa22.78■■□□□ 1.24
CDH5-204ENST00000563425 TPTE2Q6XPS3 522 aa22.78■■□□□ 1.24
CDH5-204ENST00000563425 ADGRA1Q86SQ6 560 aa22.78■■□□□ 1.24
CDH5-204ENST00000563425 ABCF2Q9UG63 623 aa22.78■■□□□ 1.24
CDH5-204ENST00000563425 NOL7Q9UMY1 257 aaKnown RBP22.78■■□□□ 1.24
CDH5-204ENST00000563425 TNRC6CQ9HCJ0 1690 aaKnown RBP22.77■■□□□ 1.24
CDH5-204ENST00000563425 OTUD7BQ6GQQ9 843 aa22.77■■□□□ 1.24
CDH5-204ENST00000563425 AMIGO3Q86WK7 504 aa22.77■■□□□ 1.24
CDH5-204ENST00000563425 ARHGEF1Q92888 912 aaKnown RBP22.77■■□□□ 1.24
CDH5-204ENST00000563425 RAI14Q9P0K7 980 aa22.77■■□□□ 1.24
CDH5-204ENST00000563425 ZBTB43O43298 467 aa22.76■■□□□ 1.23
CDH5-204ENST00000563425 FBXO33Q7Z6M2 555 aa22.76■■□□□ 1.23
CDH5-204ENST00000563425 VPS37DQ86XT2 251 aa22.76■■□□□ 1.23
CDH5-204ENST00000563425 RTEL1Q9NZ71 1219 aa22.76■■□□□ 1.23
CDH5-204ENST00000563425 USP25Q9UHP3 1055 aa22.76■■□□□ 1.23
CDH5-204ENST00000563425 MYH2Q9UKX2 1941 aa22.76■■□□□ 1.23
CDH5-204ENST00000563425 MAGEB6P1A0A0J9YX57 407 aa22.76■■□□□ 1.23
CDH5-204ENST00000563425 SEMA3EO15041 775 aa22.76■■□□□ 1.23
CDH5-204ENST00000563425 TYRO3Q06418 890 aa22.76■■□□□ 1.23
CDH5-204ENST00000563425 NFXL1Q6ZNB6 911 aa22.76■■□□□ 1.23
CDH5-204ENST00000563425 BRAPQ7Z569 592 aa22.76■■□□□ 1.23
CDH5-204ENST00000563425 GJD4Q96KN9 370 aaPredicted RBP22.76■■□□□ 1.23
CDH5-204ENST00000563425 CDC27P30260 824 aa22.75■■□□□ 1.23
CDH5-204ENST00000563425 CPLX2Q6PUV4 134 aaKnown RBP22.75■■□□□ 1.23
CDH5-204ENST00000563425 CKAP2LQ8IYA6 745 aa22.75■■□□□ 1.23
CDH5-204ENST00000563425 MRVI1Q9Y6F6 885 aa22.75■■□□□ 1.23
CDH5-204ENST00000563425 MAST2Q6P0Q8 1798 aa22.75■■□□□ 1.23
CDH5-204ENST00000563425 NID2Q14112 1375 aa22.75■■□□□ 1.23
CDH5-204ENST00000563425 PDS5AQ29RF7 1337 aaKnown RBP22.75■■□□□ 1.23
CDH5-204ENST00000563425 IFIT3O14879 490 aaKnown RBP22.74■■□□□ 1.23
CDH5-204ENST00000563425 MSNP26038 577 aaKnown RBP22.74■■□□□ 1.23
CDH5-204ENST00000563425 MICU3Q86XE3 530 aa22.74■■□□□ 1.23
CDH5-204ENST00000563425 CCAR1Q8IX12 1150 aaKnown RBP22.74■■□□□ 1.23
CDH5-204ENST00000563425 MTA3Q9BTC8 594 aa22.74■■□□□ 1.23
CDH5-204ENST00000563425 ANKRD2Q9GZV1 360 aa22.74■■□□□ 1.23
CDH5-204ENST00000563425 RXRAP19793 462 aa22.74■■□□□ 1.23
CDH5-204ENST00000563425 NTRK3Q16288 839 aa22.74■■□□□ 1.23
CDH5-204ENST00000563425 RIOK1Q9BRS2 568 aaKnown RBP22.74■■□□□ 1.23
CDH5-204ENST00000563425 RNF41Q9H4P4 317 aaPredicted RBP22.74■■□□□ 1.23
CDH5-204ENST00000563425 FAM217BQ9NTX9 383 aaPredicted RBP22.74■■□□□ 1.23
CDH5-204ENST00000563425 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.74■■□□□ 1.23
CDH5-204ENST00000563425 MYH6P13533 1939 aa22.73■■□□□ 1.23
CDH5-204ENST00000563425 GOLGA8AA7E2F4 631 aa22.73■■□□□ 1.23
CDH5-204ENST00000563425 PPARAQ07869 468 aa22.73■■□□□ 1.23
CDH5-204ENST00000563425 FAM200AQ8TCP9 573 aa22.73■■□□□ 1.23
CDH5-204ENST00000563425 GJB4Q9NTQ9 266 aa22.73■■□□□ 1.23
CDH5-204ENST00000563425 ANAPC4Q9UJX5 808 aa22.73■■□□□ 1.23
CDH5-204ENST00000563425 KIAA1551Q9HCM1 1747 aa22.73■■□□□ 1.23
CDH5-204ENST00000563425 ADCY5O95622 1261 aa22.72■■□□□ 1.23
CDH5-204ENST00000563425 TM4SF1P30408 202 aa22.72■■□□□ 1.23
CDH5-204ENST00000563425 KIF23Q02241 960 aaPredicted RBP22.72■■□□□ 1.23
CDH5-204ENST00000563425 ALG1Q9BT22 464 aa22.72■■□□□ 1.23
CDH5-204ENST00000563425 GOLPH3LQ9H4A5 285 aa22.72■■□□□ 1.23
CDH5-204ENST00000563425 POLR3EQ9NVU0 708 aa22.72■■□□□ 1.23
CDH5-204ENST00000563425 SLC12A7Q9Y666 1083 aa22.72■■□□□ 1.23
CDH5-204ENST00000563425 CCDC69A6NI79 296 aa22.72■■□□□ 1.23
CDH5-204ENST00000563425 KLRK1P26718 216 aa22.72■■□□□ 1.23
CDH5-204ENST00000563425 ME1P48163 572 aa22.72■■□□□ 1.23
CDH5-204ENST00000563425 MYSM1Q5VVJ2 828 aa22.72■■□□□ 1.23
CDH5-204ENST00000563425 CCDC24Q8N4L8 307 aa22.72■■□□□ 1.23
CDH5-204ENST00000563425 SDR42E1Q8WUS8 393 aa22.72■■□□□ 1.23
CDH5-204ENST00000563425 ZKSCAN5Q9Y2L8 839 aa22.72■■□□□ 1.23
CDH5-204ENST00000563425 UBR3Q6ZT12 1888 aa22.72■■□□□ 1.23
CDH5-204ENST00000563425 KIF28PB7ZC32 967 aa22.71■■□□□ 1.23
CDH5-204ENST00000563425 ONECUT3O60422 494 aaPredicted RBP22.71■■□□□ 1.23
CDH5-204ENST00000563425 POLR3DP05423 398 aaPredicted RBP22.71■■□□□ 1.23
CDH5-204ENST00000563425 SART3Q15020 963 aaKnown RBP22.71■■□□□ 1.23
CDH5-204ENST00000563425 RRP12Q5JTH9 1297 aaKnown RBP22.71■■□□□ 1.23
CDH5-204ENST00000563425 LINC00301Q8NCQ3 95 aa22.71■■□□□ 1.23
CDH5-204ENST00000563425 ZNF384Q8TF68 577 aa22.71■■□□□ 1.23
CDH5-204ENST00000563425 MYL10Q9BUA6 226 aa22.71■■□□□ 1.23
CDH5-204ENST00000563425 STK36Q9NRP7 1315 aa22.71■■□□□ 1.23
CDH5-204ENST00000563425 LAMB1P07942 1786 aa22.71■■□□□ 1.23
CDH5-204ENST00000563425 DLEC1Q9Y238 1755 aa22.71■■□□□ 1.23
CDH5-204ENST00000563425 YEATS4O95619 227 aa22.7■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms