RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 GTF3C2Q8WUA4 911 aaPredicted RBP6.54□□□□□ -1.36
HDGFL3-202ENST00000562702 PBXIP1Q96AQ6 731 aa6.54□□□□□ -1.36
HDGFL3-202ENST00000562702 TOX2Q96NM4 488 aa6.54□□□□□ -1.36
HDGFL3-202ENST00000562702 LIN7BQ9HAP6 207 aa6.54□□□□□ -1.36
HDGFL3-202ENST00000562702 ZFYVE28Q9HCC9 887 aa6.54□□□□□ -1.36
HDGFL3-202ENST00000562702 SLFN14P0C7P3 912 aa6.53□□□□□ -1.36
HDGFL3-202ENST00000562702 FAM87AP0C7U9 286 aa6.53□□□□□ -1.36
HDGFL3-202ENST00000562702 AP3B2Q13367 1082 aa6.53□□□□□ -1.36
HDGFL3-202ENST00000562702 IFI16Q16666 785 aaKnown RBP6.53□□□□□ -1.36
HDGFL3-202ENST00000562702 ANGEL2Q5VTE6 544 aaKnown RBP6.53□□□□□ -1.36
HDGFL3-202ENST00000562702 PLD6Q8N2A8 252 aaKnown RBP6.53□□□□□ -1.36
HDGFL3-202ENST00000562702 HRASLS5Q96KN8 279 aa6.53□□□□□ -1.36
HDGFL3-202ENST00000562702 MKNK2Q9HBH9 465 aa6.53□□□□□ -1.36
HDGFL3-202ENST00000562702 MBNL3Q9NUK0 354 aaKnown RBP6.53□□□□□ -1.36
HDGFL3-202ENST00000562702 TMEM265A0A087WTH1 108 aa6.52□□□□□ -1.37
HDGFL3-202ENST00000562702 LRRC10BA6NIK2 292 aa6.52□□□□□ -1.37
HDGFL3-202ENST00000562702 DYNC1LI2O43237 492 aaPredicted RBP6.52□□□□□ -1.37
HDGFL3-202ENST00000562702 NEFLP07196 543 aa6.52□□□□□ -1.37
HDGFL3-202ENST00000562702 CTSBP07858 339 aa6.52□□□□□ -1.37
HDGFL3-202ENST00000562702 LCE4AQ5TA78 99 aa6.52□□□□□ -1.37
HDGFL3-202ENST00000562702 WFDC3Q8IUB2 231 aa6.52□□□□□ -1.37
HDGFL3-202ENST00000562702 ZSCAN18Q8TBC5 510 aaPredicted RBP6.52□□□□□ -1.37
HDGFL3-202ENST00000562702 ATXN3LQ9H3M9 355 aa6.52□□□□□ -1.37
HDGFL3-202ENST00000562702 B3GALT4O96024 378 aa6.51□□□□□ -1.37
HDGFL3-202ENST00000562702 RAP1GAPP47736 663 aa6.51□□□□□ -1.37
HDGFL3-202ENST00000562702 AOC3Q16853 763 aa6.51□□□□□ -1.37
HDGFL3-202ENST00000562702 LRRN4CLQ8ND94 238 aa6.51□□□□□ -1.37
HDGFL3-202ENST00000562702 PPP1R16BQ96T49 567 aa6.51□□□□□ -1.37
HDGFL3-202ENST00000562702 WDR18Q9BV38 432 aa6.51□□□□□ -1.37
HDGFL3-202ENST00000562702 GTF3C3Q9Y5Q9 886 aa6.51□□□□□ -1.37
HDGFL3-202ENST00000562702 A0A1W2PP55 124 aa6.5□□□□□ -1.37
HDGFL3-202ENST00000562702 GRIA4P48058 902 aa6.5□□□□□ -1.37
HDGFL3-202ENST00000562702 CDK5R2Q13319 367 aa6.5□□□□□ -1.37
HDGFL3-202ENST00000562702 SPRED3Q2MJR0 410 aa6.5□□□□□ -1.37
HDGFL3-202ENST00000562702 SLC23A3Q6PIS1 610 aa6.5□□□□□ -1.37
HDGFL3-202ENST00000562702 ZSWIM9Q86XI8 627 aa6.5□□□□□ -1.37
HDGFL3-202ENST00000562702 GALNT12Q8IXK2 581 aa6.5□□□□□ -1.37
HDGFL3-202ENST00000562702 FAM181AQ8N9Y4 354 aa6.5□□□□□ -1.37
HDGFL3-202ENST00000562702 TRIM56Q9BRZ2 755 aaKnown RBP6.5□□□□□ -1.37
HDGFL3-202ENST00000562702 POLR3DP05423 398 aaPredicted RBP6.49□□□□□ -1.37
HDGFL3-202ENST00000562702 SF3B2Q13435 895 aaKnown RBP6.49□□□□□ -1.37
HDGFL3-202ENST00000562702 KCNMB1Q16558 191 aa6.49□□□□□ -1.37
HDGFL3-202ENST00000562702 SMYD4Q8IYR2 804 aaPredicted RBP6.49□□□□□ -1.37
HDGFL3-202ENST00000562702 TCF12Q99081 682 aa6.49□□□□□ -1.37
HDGFL3-202ENST00000562702 SLAIN2Q9P270 581 aa6.49□□□□□ -1.37
HDGFL3-202ENST00000562702 ADAMTS6Q9UKP5 1117 aa6.49□□□□□ -1.37
HDGFL3-202ENST00000562702 RNGTTO60942 597 aaKnown RBP6.48□□□□□ -1.37
HDGFL3-202ENST00000562702 CEACAM5P06731 702 aa6.48□□□□□ -1.37
HDGFL3-202ENST00000562702 NPR3P17342 541 aa6.48□□□□□ -1.37
HDGFL3-202ENST00000562702 ID3Q02535 119 aa6.48□□□□□ -1.37
HDGFL3-202ENST00000562702 FLAD1Q8NFF5 587 aa6.48□□□□□ -1.37
HDGFL3-202ENST00000562702 CCDC97Q96F63 343 aaPredicted RBP6.48□□□□□ -1.37
HDGFL3-202ENST00000562702 PPP1R9AQ9ULJ8 1098 aa6.48□□□□□ -1.37
HDGFL3-202ENST00000562702 TMPRSS2O15393 492 aa6.47□□□□□ -1.37
HDGFL3-202ENST00000562702 ECEL1O95672 775 aa6.47□□□□□ -1.37
HDGFL3-202ENST00000562702 MESP2Q0VG99 397 aa6.47□□□□□ -1.37
HDGFL3-202ENST00000562702 MLANAQ16655 118 aa6.47□□□□□ -1.37
HDGFL3-202ENST00000562702 GJD3Q8N144 294 aa6.47□□□□□ -1.37
HDGFL3-202ENST00000562702 EHD4Q9H223 541 aa6.47□□□□□ -1.37
HDGFL3-202ENST00000562702 ZNF576Q9H609 170 aa6.47□□□□□ -1.37
HDGFL3-202ENST00000562702 CRIM1Q9NZV1 1036 aa6.47□□□□□ -1.37
HDGFL3-202ENST00000562702 PCOLCE2Q9UKZ9 415 aa6.47□□□□□ -1.37
HDGFL3-202ENST00000562702 SNX11Q9Y5W9 270 aa6.47□□□□□ -1.37
HDGFL3-202ENST00000562702 PTPN12Q05209 780 aaKnown RBP6.46□□□□□ -1.38
HDGFL3-202ENST00000562702 MTMR3Q13615 1198 aa6.46□□□□□ -1.38
HDGFL3-202ENST00000562702 KIAA0319Q5VV43 1072 aa6.46□□□□□ -1.38
HDGFL3-202ENST00000562702 ANKLE2Q86XL3 938 aa6.46□□□□□ -1.38
HDGFL3-202ENST00000562702 ASB11Q8WXH4 323 aa6.46□□□□□ -1.38
HDGFL3-202ENST00000562702 FANCD2OSQ96PS1 177 aa6.46□□□□□ -1.38
HDGFL3-202ENST00000562702 SSU72Q9NP77 194 aaKnown RBP6.46□□□□□ -1.38
HDGFL3-202ENST00000562702 FZD6O60353 706 aa6.45□□□□□ -1.38
HDGFL3-202ENST00000562702 TSPAN15O95858 294 aa6.45□□□□□ -1.38
HDGFL3-202ENST00000562702 LIG1P18858 919 aa6.45□□□□□ -1.38
HDGFL3-202ENST00000562702 ITPKAP23677 461 aa6.45□□□□□ -1.38
HDGFL3-202ENST00000562702 CD96P40200 585 aa6.45□□□□□ -1.38
HDGFL3-202ENST00000562702 FKBP4Q02790 459 aaKnown RBP eCLIP6.45□□□□□ -1.38
HDGFL3-202ENST00000562702 KRTAP4-11Q9BYQ6 195 aa6.45□□□□□ -1.38
HDGFL3-202ENST00000562702 AFMP43652 599 aa6.44□□□□□ -1.38
HDGFL3-202ENST00000562702 OXCT1P55809 520 aa6.44□□□□□ -1.38
HDGFL3-202ENST00000562702 RPS26P11Q5JNZ5 115 aaPredicted RBP6.44□□□□□ -1.38
HDGFL3-202ENST00000562702 LILRA6Q6PI73 481 aa6.44□□□□□ -1.38
HDGFL3-202ENST00000562702 SIAH1Q8IUQ4 282 aa6.44□□□□□ -1.38
HDGFL3-202ENST00000562702 DUSP23Q9BVJ7 150 aa6.44□□□□□ -1.38
HDGFL3-202ENST00000562702 KRT82Q9NSB4 513 aa6.44□□□□□ -1.38
HDGFL3-202ENST00000562702 GTF2IRD1Q9UHL9 959 aa6.44□□□□□ -1.38
HDGFL3-202ENST00000562702 ITIH2P19823 946 aa6.43□□□□□ -1.38
HDGFL3-202ENST00000562702 IKZF1Q13422 519 aa6.43□□□□□ -1.38
HDGFL3-202ENST00000562702 MPZL3Q6UWV2 235 aa6.43□□□□□ -1.38
HDGFL3-202ENST00000562702 LRRC56Q8IYG6 542 aaPredicted RBP6.43□□□□□ -1.38
HDGFL3-202ENST00000562702 CCDC87Q9NVE4 849 aa6.43□□□□□ -1.38
HDGFL3-202ENST00000562702 SERPINA10Q9UK55 444 aa6.43□□□□□ -1.38
HDGFL3-202ENST00000562702 ZNF865P0CJ78 1059 aaPredicted RBP6.42□□□□□ -1.38
HDGFL3-202ENST00000562702 HCLS1P14317 486 aaPredicted RBP6.42□□□□□ -1.38
HDGFL3-202ENST00000562702 SSFA2P28290 1259 aa6.42□□□□□ -1.38
HDGFL3-202ENST00000562702 ZP2Q05996 745 aa6.42□□□□□ -1.38
HDGFL3-202ENST00000562702 TTLL4Q14679 1199 aa6.42□□□□□ -1.38
HDGFL3-202ENST00000562702 KIF4BQ2VIQ3 1234 aa6.42□□□□□ -1.38
HDGFL3-202ENST00000562702 CCER1Q8TC90 406 aaPredicted RBP6.42□□□□□ -1.38
HDGFL3-202ENST00000562702 ZC3H12CQ9C0D7 883 aaKnown RBP6.42□□□□□ -1.38
HDGFL3-202ENST00000562702 CCDC86Q9H6F5 360 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms