RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 C8orf76Q96K31 380 aa11.48□□□□□ -0.57
SMG1-205ENST00000561947 KRT23Q9C075 422 aa11.48□□□□□ -0.57
SMG1-205ENST00000561947 RAI14Q9P0K7 980 aa11.48□□□□□ -0.57
SMG1-205ENST00000561947 TACC3Q9Y6A5 838 aa11.48□□□□□ -0.57
SMG1-205ENST00000561947 SEMA3EO15041 775 aa11.47□□□□□ -0.57
SMG1-205ENST00000561947 ONECUT3O60422 494 aaPredicted RBP11.47□□□□□ -0.57
SMG1-205ENST00000561947 METAP2P50579 478 aaKnown RBP eCLIP11.47□□□□□ -0.57
SMG1-205ENST00000561947 APOA5Q6Q788 366 aa11.47□□□□□ -0.57
SMG1-205ENST00000561947 FBXO33Q7Z6M2 555 aa11.47□□□□□ -0.57
SMG1-205ENST00000561947 ADGRA1Q86SQ6 560 aa11.47□□□□□ -0.57
SMG1-205ENST00000561947 ILDR1Q86SU0 546 aaPredicted RBP11.47□□□□□ -0.57
SMG1-205ENST00000561947 SGMS1Q86VZ5 419 aa11.47□□□□□ -0.57
SMG1-205ENST00000561947 ANKRD2Q9GZV1 360 aa11.47□□□□□ -0.57
SMG1-205ENST00000561947 LY9Q9HBG7 655 aa11.47□□□□□ -0.57
SMG1-205ENST00000561947 INCENPQ9NQS7 918 aa11.47□□□□□ -0.57
SMG1-205ENST00000561947 DDX19AQ9NUU7 478 aaKnown RBP11.47□□□□□ -0.57
SMG1-205ENST00000561947 RCOR1Q9UKL0 485 aa11.47□□□□□ -0.57
SMG1-205ENST00000561947 MAGEB6P1A0A0J9YX57 407 aa11.47□□□□□ -0.57
SMG1-205ENST00000561947 MAP3K11Q16584 847 aa11.47□□□□□ -0.57
SMG1-205ENST00000561947 HS1BP3Q53T59 392 aa11.47□□□□□ -0.57
SMG1-205ENST00000561947 TMEM67Q5HYA8 995 aa11.47□□□□□ -0.57
SMG1-205ENST00000561947 MFSD6Q6ZSS7 791 aa11.47□□□□□ -0.57
SMG1-205ENST00000561947 RGS22Q8NE09 1264 aa11.47□□□□□ -0.57
SMG1-205ENST00000561947 BICD2Q8TD16 824 aa11.47□□□□□ -0.57
SMG1-205ENST00000561947 USP28Q96RU2 1077 aa11.47□□□□□ -0.57
SMG1-205ENST00000561947 SENP2Q9HC62 589 aa11.47□□□□□ -0.57
SMG1-205ENST00000561947 DACT1Q9NYF0 836 aa11.47□□□□□ -0.57
SMG1-205ENST00000561947 MAST2Q6P0Q8 1798 aa11.47□□□□□ -0.57
SMG1-205ENST00000561947 KDM4AO75164 1064 aa11.46□□□□□ -0.57
SMG1-205ENST00000561947 CDKL5O76039 1030 aa11.46□□□□□ -0.57
SMG1-205ENST00000561947 RFC4P35249 363 aa11.46□□□□□ -0.57
SMG1-205ENST00000561947 CLCN1P35523 988 aa11.46□□□□□ -0.57
SMG1-205ENST00000561947 LIFRP42702 1097 aa11.46□□□□□ -0.57
SMG1-205ENST00000561947 TRAPPC3LQ5T215 181 aa11.46□□□□□ -0.57
SMG1-205ENST00000561947 CCDC24Q8N4L8 307 aa11.46□□□□□ -0.57
SMG1-205ENST00000561947 FBXO18Q8NFZ0 1043 aa11.46□□□□□ -0.57
SMG1-205ENST00000561947 ZSWIM5Q9P217 1185 aa11.46□□□□□ -0.57
SMG1-205ENST00000561947 PDS5AQ29RF7 1337 aaKnown RBP11.46□□□□□ -0.57
SMG1-205ENST00000561947 ZBTB43O43298 467 aa11.46□□□□□ -0.58
SMG1-205ENST00000561947 CCDC192P0DO97 292 aa11.46□□□□□ -0.58
SMG1-205ENST00000561947 TM4SF1P30408 202 aa11.46□□□□□ -0.58
SMG1-205ENST00000561947 CEBPZQ03701 1054 aaKnown RBP11.46□□□□□ -0.58
SMG1-205ENST00000561947 NFXL1Q6ZNB6 911 aa11.46□□□□□ -0.58
SMG1-205ENST00000561947 SEPT12Q8IYM1 358 aa11.46□□□□□ -0.58
SMG1-205ENST00000561947 CLSTN2Q9H4D0 955 aa11.46□□□□□ -0.58
SMG1-205ENST00000561947 TRPC5Q9UL62 973 aaPredicted RBP11.46□□□□□ -0.58
SMG1-205ENST00000561947 UBR3Q6ZT12 1888 aa11.46□□□□□ -0.58
SMG1-205ENST00000561947 IFIT3O14879 490 aaKnown RBP11.45□□□□□ -0.58
SMG1-205ENST00000561947 KLRK1P26718 216 aa11.45□□□□□ -0.58
SMG1-205ENST00000561947 OTUD7BQ6GQQ9 843 aa11.45□□□□□ -0.58
SMG1-205ENST00000561947 CPLX2Q6PUV4 134 aaKnown RBP11.45□□□□□ -0.58
SMG1-205ENST00000561947 FAM196AQ6ZSG2 479 aa11.45□□□□□ -0.58
SMG1-205ENST00000561947 RIOK1Q9BRS2 568 aaKnown RBP11.45□□□□□ -0.58
SMG1-205ENST00000561947 FTOQ9C0B1 505 aaKnown RBP eCLIP11.45□□□□□ -0.58
SMG1-205ENST00000561947 TNMDQ9H2S6 317 aa11.45□□□□□ -0.58
SMG1-205ENST00000561947 CCDC88AQ3V6T2 1871 aa11.45□□□□□ -0.58
SMG1-205ENST00000561947 NR1I2O75469 434 aa11.45□□□□□ -0.58
SMG1-205ENST00000561947 RXRAP19793 462 aa11.45□□□□□ -0.58
SMG1-205ENST00000561947 HSPA1LP34931 641 aa11.45□□□□□ -0.58
SMG1-205ENST00000561947 PPARAQ07869 468 aa11.45□□□□□ -0.58
SMG1-205ENST00000561947 RBM43Q6ZSC3 357 aaKnown RBP11.45□□□□□ -0.58
SMG1-205ENST00000561947 MICU3Q86XE3 530 aa11.45□□□□□ -0.58
SMG1-205ENST00000561947 BCL11BQ9C0K0 894 aaPredicted RBP11.45□□□□□ -0.58
SMG1-205ENST00000561947 RNF41Q9H4P4 317 aaPredicted RBP11.45□□□□□ -0.58
SMG1-205ENST00000561947 NID2Q14112 1375 aa11.45□□□□□ -0.58
SMG1-205ENST00000561947 BAZ2AQ9UIF9 1905 aaKnown RBP11.45□□□□□ -0.58
SMG1-205ENST00000561947 GOLGA8AA7E2F4 631 aa11.44□□□□□ -0.58
SMG1-205ENST00000561947 CDC27P30260 824 aa11.44□□□□□ -0.58
SMG1-205ENST00000561947 HIBADHP31937 336 aaKnown RBP11.44□□□□□ -0.58
SMG1-205ENST00000561947 CAMK4Q16566 473 aa11.44□□□□□ -0.58
SMG1-205ENST00000561947 ZSCAN30Q86W11 494 aa11.44□□□□□ -0.58
SMG1-205ENST00000561947 CERKQ8TCT0 537 aa11.44□□□□□ -0.58
SMG1-205ENST00000561947 SDR42E1Q8WUS8 393 aa11.44□□□□□ -0.58
SMG1-205ENST00000561947 MTA3Q9BTC8 594 aa11.44□□□□□ -0.58
SMG1-205ENST00000561947 ANAPC4Q9UJX5 808 aa11.44□□□□□ -0.58
SMG1-205ENST00000561947 CCDC69A6NI79 296 aa11.44□□□□□ -0.58
SMG1-205ENST00000561947 NPHP1O15259 732 aa11.44□□□□□ -0.58
SMG1-205ENST00000561947 NFIXQ14938 502 aa11.44□□□□□ -0.58
SMG1-205ENST00000561947 RRP12Q5JTH9 1297 aaKnown RBP11.44□□□□□ -0.58
SMG1-205ENST00000561947 BRAPQ7Z569 592 aa11.44□□□□□ -0.58
SMG1-205ENST00000561947 RTEL1Q9NZ71 1219 aa11.44□□□□□ -0.58
SMG1-205ENST00000561947 SLC12A7Q9Y666 1083 aa11.44□□□□□ -0.58
SMG1-205ENST00000561947 ZBTB22O15209 634 aa11.43□□□□□ -0.58
SMG1-205ENST00000561947 ADRA2BP18089 450 aa11.43□□□□□ -0.58
SMG1-205ENST00000561947 KIF23Q02241 960 aaPredicted RBP11.43□□□□□ -0.58
SMG1-205ENST00000561947 SART3Q15020 963 aaKnown RBP11.43□□□□□ -0.58
SMG1-205ENST00000561947 ZNF384Q8TF68 577 aa11.43□□□□□ -0.58
SMG1-205ENST00000561947 ALG1Q9BT22 464 aa11.43□□□□□ -0.58
SMG1-205ENST00000561947 TOMM22Q9NS69 142 aa11.43□□□□□ -0.58
SMG1-205ENST00000561947 LRRC4BQ9NT99 713 aa11.43□□□□□ -0.58
SMG1-205ENST00000561947 FAM217BQ9NTX9 383 aaPredicted RBP11.43□□□□□ -0.58
SMG1-205ENST00000561947 TFCP2L1Q9NZI6 479 aa11.43□□□□□ -0.58
SMG1-205ENST00000561947 KIAA1551Q9HCM1 1747 aa11.43□□□□□ -0.58
SMG1-205ENST00000561947 DYNLL1P63167 89 aaKnown RBP11.43□□□□□ -0.58
SMG1-205ENST00000561947 TYRO3Q06418 890 aa11.43□□□□□ -0.58
SMG1-205ENST00000561947 NTRK3Q16288 839 aa11.43□□□□□ -0.58
SMG1-205ENST00000561947 CCAR1Q8IX12 1150 aaKnown RBP11.43□□□□□ -0.58
SMG1-205ENST00000561947 CCDC144CPQ8IYA2 1237 aa11.43□□□□□ -0.58
SMG1-205ENST00000561947 NSUN4Q96CB9 384 aaKnown RBP11.43□□□□□ -0.58
SMG1-205ENST00000561947 BRIP1Q9BX63 1249 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms