RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 CYP7A1P22680 504 aa13.99□□□□□ -0.17
HERC1-214ENST00000561400 CNOT7Q9UIV1 285 aaKnown RBP13.99□□□□□ -0.17
HERC1-214ENST00000561400 PCDHAC2Q9Y5I4 1007 aa13.99□□□□□ -0.17
HERC1-214ENST00000561400 PTMAP06454 111 aaKnown RBP13.99□□□□□ -0.17
HERC1-214ENST00000561400 UBE3CQ15386 1083 aa13.99□□□□□ -0.17
HERC1-214ENST00000561400 ZSCAN25Q6NSZ9 544 aa13.99□□□□□ -0.17
HERC1-214ENST00000561400 TMED8Q6PL24 325 aaPredicted RBP13.99□□□□□ -0.17
HERC1-214ENST00000561400 MICALL2Q8IY33 904 aa13.99□□□□□ -0.17
HERC1-214ENST00000561400 FAM227BQ96M60 508 aa13.99□□□□□ -0.17
HERC1-214ENST00000561400 GPRC5DQ9NZD1 345 aa13.99□□□□□ -0.17
HERC1-214ENST00000561400 RFX7Q2KHR2 1363 aa13.99□□□□□ -0.17
HERC1-214ENST00000561400 MAST3O60307 1309 aa13.98□□□□□ -0.17
HERC1-214ENST00000561400 ZFYP08048 801 aaPredicted RBP13.98□□□□□ -0.17
HERC1-214ENST00000561400 CHMLP26374 656 aa13.98□□□□□ -0.17
HERC1-214ENST00000561400 CLCN1P35523 988 aa13.98□□□□□ -0.17
HERC1-214ENST00000561400 CRKP46108 304 aa13.98□□□□□ -0.17
HERC1-214ENST00000561400 OGFOD1Q8N543 542 aa13.98□□□□□ -0.17
HERC1-214ENST00000561400 OSBP2Q969R2 916 aa13.98□□□□□ -0.17
HERC1-214ENST00000561400 FAM163AQ96GL9 167 aaPredicted RBP13.98□□□□□ -0.17
HERC1-214ENST00000561400 SEC62Q99442 399 aaKnown RBP13.98□□□□□ -0.17
HERC1-214ENST00000561400 MRIQ9BWK5 157 aa13.98□□□□□ -0.17
HERC1-214ENST00000561400 CLSTN1O94985 981 aa13.98□□□□□ -0.17
HERC1-214ENST00000561400 EGFRP00533 1210 aa13.98□□□□□ -0.17
HERC1-214ENST00000561400 EPS15P42566 896 aa13.98□□□□□ -0.17
HERC1-214ENST00000561400 ZNF280AP59817 542 aaPredicted RBP13.98□□□□□ -0.17
HERC1-214ENST00000561400 HDLBPQ00341 1268 aaKnown RBP13.98□□□□□ -0.17
HERC1-214ENST00000561400 ZMYM1Q5SVZ6 1142 aa13.98□□□□□ -0.17
HERC1-214ENST00000561400 TEKT1Q969V4 418 aa13.98□□□□□ -0.17
HERC1-214ENST00000561400 PUS7LQ9H0K6 701 aaKnown RBP13.98□□□□□ -0.17
HERC1-214ENST00000561400 SERPINA10Q9UK55 444 aa13.98□□□□□ -0.17
HERC1-214ENST00000561400 DAGLAQ9Y4D2 1042 aa13.98□□□□□ -0.17
HERC1-214ENST00000561400 MROH7-TTC4A0A0A0MT08 1334 aa13.97□□□□□ -0.17
HERC1-214ENST00000561400 GAKO14976 1311 aa13.97□□□□□ -0.17
HERC1-214ENST00000561400 A0A0D9SFI3 127 aa13.97□□□□□ -0.17
HERC1-214ENST00000561400 GSTO1P78417 241 aa13.97□□□□□ -0.17
HERC1-214ENST00000561400 NMIQ13287 307 aaPredicted RBP13.97□□□□□ -0.17
HERC1-214ENST00000561400 LRRFIP1Q32MZ4 808 aaKnown RBP13.97□□□□□ -0.17
HERC1-214ENST00000561400 HHIPL2Q6UWX4 724 aa13.97□□□□□ -0.17
HERC1-214ENST00000561400 APPBP2Q92624 585 aa13.97□□□□□ -0.17
HERC1-214ENST00000561400 L3MBTL3Q96JM7 780 aaPredicted RBP13.97□□□□□ -0.17
HERC1-214ENST00000561400 HDAC9Q9UKV0 1011 aa13.97□□□□□ -0.17
HERC1-214ENST00000561400 WDR90Q96KV7 1748 aa13.97□□□□□ -0.17
HERC1-214ENST00000561400 SCN4AP35499 1836 aa13.97□□□□□ -0.17
HERC1-214ENST00000561400 CDK5RAP2Q96SN8 1893 aa13.97□□□□□ -0.17
HERC1-214ENST00000561400 CFAP100Q494V2 611 aa13.96□□□□□ -0.17
HERC1-214ENST00000561400 CWC27Q6UX04 472 aaKnown RBP13.96□□□□□ -0.17
HERC1-214ENST00000561400 SAMD7Q7Z3H4 446 aa13.96□□□□□ -0.17
HERC1-214ENST00000561400 MIGA1Q8NAN2 632 aa13.96□□□□□ -0.17
HERC1-214ENST00000561400 ZNF592Q92610 1267 aa13.96□□□□□ -0.17
HERC1-214ENST00000561400 ZDHHC15Q96MV8 337 aa13.96□□□□□ -0.17
HERC1-214ENST00000561400 IL25Q9H293 177 aa13.96□□□□□ -0.17
HERC1-214ENST00000561400 DIAPH3Q9NSV4 1193 aa13.96□□□□□ -0.17
HERC1-214ENST00000561400 ECM29Q5VYK3 1845 aa13.96□□□□□ -0.17
HERC1-214ENST00000561400 POTECB2RU33 542 aa13.96□□□□□ -0.17
HERC1-214ENST00000561400 CDC45O75419 566 aa13.96□□□□□ -0.17
HERC1-214ENST00000561400 LDHCP07864 332 aa13.96□□□□□ -0.17
HERC1-214ENST00000561400 RBM5P52756 815 aaKnown RBP eCLIP13.96□□□□□ -0.17
HERC1-214ENST00000561400 APOBEC3HQ6NTF7 200 aaKnown RBP13.96□□□□□ -0.17
HERC1-214ENST00000561400 SLF2Q8IX21 1173 aa13.96□□□□□ -0.17
HERC1-214ENST00000561400 PRMT6Q96LA8 375 aaPredicted RBP13.96□□□□□ -0.17
HERC1-214ENST00000561400 MYOZ2Q9NPC6 264 aa13.96□□□□□ -0.17
HERC1-214ENST00000561400 ZHX1Q9UKY1 873 aaPredicted RBP13.96□□□□□ -0.17
HERC1-214ENST00000561400 GPR75-ASB3A0A0A6YYF3 556 aa13.95□□□□□ -0.18
HERC1-214ENST00000561400 M0R2C6 588 aa13.95□□□□□ -0.18
HERC1-214ENST00000561400 HIP1O00291 1037 aa13.95□□□□□ -0.18
HERC1-214ENST00000561400 TPM2P07951 284 aa13.95□□□□□ -0.18
HERC1-214ENST00000561400 DYNLL1P63167 89 aaKnown RBP13.95□□□□□ -0.18
HERC1-214ENST00000561400 TBC1D10BQ4KMP7 808 aaPredicted RBP13.95□□□□□ -0.18
HERC1-214ENST00000561400 AATFQ9NY61 560 aaKnown RBP eCLIP13.95□□□□□ -0.18
HERC1-214ENST00000561400 H7C1D1 291 aa13.95□□□□□ -0.18
HERC1-214ENST00000561400 BTDP43251 543 aa13.95□□□□□ -0.18
HERC1-214ENST00000561400 PPP4R3BQ5MIZ7 849 aa13.95□□□□□ -0.18
HERC1-214ENST00000561400 RBM26Q5T8P6 1007 aaKnown RBP13.95□□□□□ -0.18
HERC1-214ENST00000561400 CCDC129Q6ZRS4 1044 aa13.95□□□□□ -0.18
HERC1-214ENST00000561400 RIOK1Q9BRS2 568 aaKnown RBP13.95□□□□□ -0.18
HERC1-214ENST00000561400 SPDYE2BA6NHP3 402 aa13.94□□□□□ -0.18
HERC1-214ENST00000561400 WNT10BO00744 389 aa13.94□□□□□ -0.18
HERC1-214ENST00000561400 SPDYE6P0CI01 402 aa13.94□□□□□ -0.18
HERC1-214ENST00000561400 LMOD1P29536 600 aaPredicted RBP13.94□□□□□ -0.18
HERC1-214ENST00000561400 DLGAP5Q15398 846 aa13.94□□□□□ -0.18
HERC1-214ENST00000561400 NBPF9Q3BBW0 867 aa13.94□□□□□ -0.18
HERC1-214ENST00000561400 ZNF589Q86UQ0 364 aaPredicted RBP13.94□□□□□ -0.18
HERC1-214ENST00000561400 MTMR14Q8NCE2 650 aa13.94□□□□□ -0.18
HERC1-214ENST00000561400 TRPM4Q8TD43 1214 aa13.94□□□□□ -0.18
HERC1-214ENST00000561400 ZBED3Q96IU2 234 aaPredicted RBP13.94□□□□□ -0.18
HERC1-214ENST00000561400 ARID3AQ99856 593 aa13.94□□□□□ -0.18
HERC1-214ENST00000561400 HELLSQ9NRZ9 838 aa13.94□□□□□ -0.18
HERC1-214ENST00000561400 POLR2AP24928 1970 aaKnown RBP13.94□□□□□ -0.18
HERC1-214ENST00000561400 PPP4CP60510 307 aa13.94□□□□□ -0.18
HERC1-214ENST00000561400 MCMDC2Q4G0Z9 681 aa13.94□□□□□ -0.18
HERC1-214ENST00000561400 FAM43BQ6ZT52 329 aaPredicted RBP13.94□□□□□ -0.18
HERC1-214ENST00000561400 LCORLQ8N3X6 602 aa13.94□□□□□ -0.18
HERC1-214ENST00000561400 ANP32BQ92688 251 aaKnown RBP13.94□□□□□ -0.18
HERC1-214ENST00000561400 ARMT1Q9H993 441 aa13.94□□□□□ -0.18
HERC1-214ENST00000561400 MAGEB6P1A0A0J9YX57 407 aa13.93□□□□□ -0.18
HERC1-214ENST00000561400 MBD4O95243 580 aa13.93□□□□□ -0.18
HERC1-214ENST00000561400 HIRAP54198 1017 aaPredicted RBP13.93□□□□□ -0.18
HERC1-214ENST00000561400 RHBDL3P58872 404 aa13.93□□□□□ -0.18
HERC1-214ENST00000561400 KIF4BQ2VIQ3 1234 aa13.93□□□□□ -0.18
HERC1-214ENST00000561400 TDRD3Q9H7E2 651 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms