RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 RRP7AQ9Y3A4 280 aaKnown RBP7.09□□□□□ -1.27
HERC1-213ENST00000561359 TNFRSF10AO00220 468 aa7.08□□□□□ -1.28
HERC1-213ENST00000561359 DIAPH1O60610 1272 aaKnown RBP7.08□□□□□ -1.28
HERC1-213ENST00000561359 USP17L8P0C7I0 530 aa7.08□□□□□ -1.28
HERC1-213ENST00000561359 HCLS1P14317 486 aaPredicted RBP7.08□□□□□ -1.28
HERC1-213ENST00000561359 MMP16P51512 607 aa7.08□□□□□ -1.28
HERC1-213ENST00000561359 FOXC1Q12948 553 aa7.08□□□□□ -1.28
HERC1-213ENST00000561359 PARP10Q53GL7 1025 aa7.08□□□□□ -1.28
HERC1-213ENST00000561359 SLC10A5Q5PT55 438 aa7.08□□□□□ -1.28
HERC1-213ENST00000561359 TMC4Q7Z404 712 aa7.08□□□□□ -1.28
HERC1-213ENST00000561359 RETREG3Q86VR2 466 aa7.08□□□□□ -1.28
HERC1-213ENST00000561359 AGBL3Q8NEM8 1001 aa7.08□□□□□ -1.28
HERC1-213ENST00000561359 TBC1D2Q9BYX2 928 aa7.08□□□□□ -1.28
HERC1-213ENST00000561359 PANK3Q9H999 370 aa7.08□□□□□ -1.28
HERC1-213ENST00000561359 MTMR10Q9NXD2 777 aa7.08□□□□□ -1.28
HERC1-213ENST00000561359 POLLQ9UGP5 575 aa7.08□□□□□ -1.28
HERC1-213ENST00000561359 ANGEL1Q9UNK9 670 aaKnown RBP7.08□□□□□ -1.28
HERC1-213ENST00000561359 CEMIPQ8WUJ3 1361 aa7.08□□□□□ -1.28
HERC1-213ENST00000561359 DXOO77932 396 aaKnown RBP7.07□□□□□ -1.28
HERC1-213ENST00000561359 ZBTB48P10074 688 aaPredicted RBP7.07□□□□□ -1.28
HERC1-213ENST00000561359 MYL6BP14649 208 aa7.07□□□□□ -1.28
HERC1-213ENST00000561359 NBPF9Q3BBW0 867 aa7.07□□□□□ -1.28
HERC1-213ENST00000561359 LDLRAD1Q5T700 205 aa7.07□□□□□ -1.28
HERC1-213ENST00000561359 RSBN1LQ6PCB5 846 aaPredicted RBP7.07□□□□□ -1.28
HERC1-213ENST00000561359 SHISA4Q96DD7 197 aa7.07□□□□□ -1.28
HERC1-213ENST00000561359 ZC3H12CQ9C0D7 883 aaKnown RBP7.07□□□□□ -1.28
HERC1-213ENST00000561359 PCDHGC3Q9UN70 934 aa7.07□□□□□ -1.28
HERC1-213ENST00000561359 ERBB4Q15303 1308 aa7.06□□□□□ -1.28
HERC1-213ENST00000561359 PRUNE2Q8WUY3 3088 aa7.06□□□□□ -1.28
HERC1-213ENST00000561359 SPTBN5Q9NRC6 3674 aaKnown RBP7.06□□□□□ -1.28
HERC1-213ENST00000561359 U2SURPO15042 1029 aaKnown RBP7.06□□□□□ -1.28
HERC1-213ENST00000561359 JUNDP17535 347 aa7.06□□□□□ -1.28
HERC1-213ENST00000561359 GPSM2P81274 684 aa7.06□□□□□ -1.28
HERC1-213ENST00000561359 MTFR1Q15390 333 aa7.06□□□□□ -1.28
HERC1-213ENST00000561359 WNK4Q96J92 1243 aa7.06□□□□□ -1.28
HERC1-213ENST00000561359 FZD1Q9UP38 647 aa7.06□□□□□ -1.28
HERC1-213ENST00000561359 FARP2O94887 1054 aaPredicted RBP7.05□□□□□ -1.28
HERC1-213ENST00000561359 MTMR2Q13614 643 aa7.05□□□□□ -1.28
HERC1-213ENST00000561359 KIF22Q14807 665 aa7.05□□□□□ -1.28
HERC1-213ENST00000561359 PKDCCQ504Y2 493 aa7.05□□□□□ -1.28
HERC1-213ENST00000561359 TRAF7Q6Q0C0 670 aa7.05□□□□□ -1.28
HERC1-213ENST00000561359 TRIM67Q6ZTA4 783 aa7.05□□□□□ -1.28
HERC1-213ENST00000561359 TBC1D16Q8TBP0 767 aa7.05□□□□□ -1.28
HERC1-213ENST00000561359 RTF1Q92541 710 aaKnown RBP7.05□□□□□ -1.28
HERC1-213ENST00000561359 CLMNQ96JQ2 1002 aa7.05□□□□□ -1.28
HERC1-213ENST00000561359 RAPGEFL1Q9UHV5 662 aa7.05□□□□□ -1.28
HERC1-213ENST00000561359 KNSTRNQ9Y448 316 aa7.05□□□□□ -1.28
HERC1-213ENST00000561359 DUOX1Q9NRD9 1551 aa7.04□□□□□ -1.28
HERC1-213ENST00000561359 WNT10BO00744 389 aa7.04□□□□□ -1.28
HERC1-213ENST00000561359 PPP1R12BO60237 982 aaPredicted RBP7.04□□□□□ -1.28
HERC1-213ENST00000561359 UFL1O94874 794 aa7.04□□□□□ -1.28
HERC1-213ENST00000561359 PLA2G5P39877 138 aa7.04□□□□□ -1.28
HERC1-213ENST00000561359 GJA8P48165 433 aa7.04□□□□□ -1.28
HERC1-213ENST00000561359 PRR20EP86478 221 aa7.04□□□□□ -1.28
HERC1-213ENST00000561359 PRR20CP86479 221 aa7.04□□□□□ -1.28
HERC1-213ENST00000561359 PRR20DP86480 221 aa7.04□□□□□ -1.28
HERC1-213ENST00000561359 PRR20BP86481 221 aa7.04□□□□□ -1.28
HERC1-213ENST00000561359 PRR20AP86496 221 aa7.04□□□□□ -1.28
HERC1-213ENST00000561359 TAF1CQ15572 869 aaPredicted RBP7.04□□□□□ -1.28
HERC1-213ENST00000561359 CSPP1Q1MSJ5 1256 aa7.04□□□□□ -1.28
HERC1-213ENST00000561359 MCM10Q7L590 875 aa7.04□□□□□ -1.28
HERC1-213ENST00000561359 UBE2Q1Q7Z7E8 422 aa7.04□□□□□ -1.28
HERC1-213ENST00000561359 OGFOD1Q8N543 542 aa7.04□□□□□ -1.28
HERC1-213ENST00000561359 FAM122AQ96E09 287 aa7.04□□□□□ -1.28
HERC1-213ENST00000561359 GMLQ99445 158 aa7.04□□□□□ -1.28
HERC1-213ENST00000561359 PTPN18Q99952 460 aa7.04□□□□□ -1.28
HERC1-213ENST00000561359 ZFYVE28Q9HCC9 887 aa7.04□□□□□ -1.28
HERC1-213ENST00000561359 BIN2Q9UBW5 565 aaPredicted RBP7.04□□□□□ -1.28
HERC1-213ENST00000561359 TRMT112Q9UI30 125 aaKnown RBP7.04□□□□□ -1.28
HERC1-213ENST00000561359 EYSQ5T1H1 3165 aa7.04□□□□□ -1.28
HERC1-213ENST00000561359 RPTORQ8N122 1335 aa7.03□□□□□ -1.28
HERC1-213ENST00000561359 LAMA2P24043 3122 aaKnown RBP7.03□□□□□ -1.28
HERC1-213ENST00000561359 USP17L3A6NCW0 530 aa7.03□□□□□ -1.28
HERC1-213ENST00000561359 USP17L4A6NCW7 530 aa7.03□□□□□ -1.28
HERC1-213ENST00000561359 FAM187AA6NFU0 413 aa7.03□□□□□ -1.28
HERC1-213ENST00000561359 SPDYE5A6NIY4 337 aa7.03□□□□□ -1.28
HERC1-213ENST00000561359 GDF9O60383 454 aa7.03□□□□□ -1.28
HERC1-213ENST00000561359 SASH1O94885 1247 aa7.03□□□□□ -1.28
HERC1-213ENST00000561359 GJB1P08034 283 aa7.03□□□□□ -1.28
HERC1-213ENST00000561359 TRIM32Q13049 653 aa7.03□□□□□ -1.28
HERC1-213ENST00000561359 USP17L1Q7RTZ2 530 aa7.03□□□□□ -1.28
HERC1-213ENST00000561359 RIC3Q7Z5B4 369 aa7.03□□□□□ -1.28
HERC1-213ENST00000561359 APOBEC3FQ8IUX4 373 aaKnown RBP7.03□□□□□ -1.28
HERC1-213ENST00000561359 PRR7Q8TB68 274 aa7.03□□□□□ -1.28
HERC1-213ENST00000561359 CELF1Q92879 486 aaKnown RBP7.03□□□□□ -1.28
HERC1-213ENST00000561359 NUDT12Q9BQG2 462 aa7.03□□□□□ -1.28
HERC1-213ENST00000561359 ARHGAP39Q9C0H5 1083 aa7.03□□□□□ -1.28
HERC1-213ENST00000561359 RNF208Q9H0X6 261 aa7.03□□□□□ -1.28
HERC1-213ENST00000561359 MIS18AQ9NYP9 233 aa7.03□□□□□ -1.28
HERC1-213ENST00000561359 ANKIB1Q9P2G1 1089 aa7.03□□□□□ -1.28
HERC1-213ENST00000561359 GGA1Q9UJY5 639 aa7.03□□□□□ -1.28
HERC1-213ENST00000561359 SH3TC1Q8TE82 1336 aa7.02□□□□□ -1.28
HERC1-213ENST00000561359 NUP98P52948 1817 aa7.02□□□□□ -1.29
HERC1-213ENST00000561359 WDHD1O75717 1129 aaPredicted RBP7.02□□□□□ -1.29
HERC1-213ENST00000561359 CCL5P13501 91 aa7.02□□□□□ -1.29
HERC1-213ENST00000561359 BMP8BP34820 402 aa7.02□□□□□ -1.29
HERC1-213ENST00000561359 GJA5P36382 358 aa7.02□□□□□ -1.29
HERC1-213ENST00000561359 DCTN1Q14203 1278 aa7.02□□□□□ -1.29
HERC1-213ENST00000561359 LRIT3Q3SXY7 679 aa7.02□□□□□ -1.29
HERC1-213ENST00000561359 CYP4X1Q8N118 509 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms