RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 CEP162Q5TB80 1403 aa6.03□□□□□ -1.44
HERC1-211ENST00000560983 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.03□□□□□ -1.44
HERC1-211ENST00000560983 PTCD1O75127 700 aaKnown RBP6.03□□□□□ -1.44
HERC1-211ENST00000560983 PSAPP07602 524 aa6.03□□□□□ -1.44
HERC1-211ENST00000560983 EIF2AK2P19525 551 aaKnown RBP6.03□□□□□ -1.44
HERC1-211ENST00000560983 Q6ZS46 218 aa6.03□□□□□ -1.44
HERC1-211ENST00000560983 HFE2Q6ZVN8 426 aa6.03□□□□□ -1.44
HERC1-211ENST00000560983 OR13H1Q8NG92 308 aa6.03□□□□□ -1.44
HERC1-211ENST00000560983 TP53INP1Q96A56 240 aa6.03□□□□□ -1.44
HERC1-211ENST00000560983 TRPM2O94759 1503 aa6.03□□□□□ -1.44
HERC1-211ENST00000560983 CFAP65Q6ZU64 1925 aaKnown RBP6.02□□□□□ -1.45
HERC1-211ENST00000560983 J3QW42 95 aa6.02□□□□□ -1.45
HERC1-211ENST00000560983 TM4SF5O14894 197 aa6.02□□□□□ -1.45
HERC1-211ENST00000560983 TRIM37O94972 964 aa6.02□□□□□ -1.45
HERC1-211ENST00000560983 XPCQ01831 940 aaPredicted RBP6.02□□□□□ -1.45
HERC1-211ENST00000560983 DZIP1LQ8IYY4 767 aaKnown RBP6.02□□□□□ -1.45
HERC1-211ENST00000560983 CACTIN-AS1Q8N1I8 211 aa6.02□□□□□ -1.45
HERC1-211ENST00000560983 TMEM130Q8N3G9 435 aa6.02□□□□□ -1.45
HERC1-211ENST00000560983 MEGF10Q96KG7 1140 aa6.02□□□□□ -1.45
HERC1-211ENST00000560983 SYT17Q9BSW7 474 aa6.02□□□□□ -1.45
HERC1-211ENST00000560983 RRP7BPQ9NSQ0 103 aa6.02□□□□□ -1.45
HERC1-211ENST00000560983 METP08581 1390 aa6.02□□□□□ -1.45
HERC1-211ENST00000560983 ARHGEF5Q12774 1597 aa6.01□□□□□ -1.45
HERC1-211ENST00000560983 LAMC1P11047 1609 aa6.01□□□□□ -1.45
HERC1-211ENST00000560983 COL22A1Q8NFW1 1626 aaPredicted RBP6.01□□□□□ -1.45
HERC1-211ENST00000560983 EIF2AK4Q9P2K8 1649 aaKnown RBP6.01□□□□□ -1.45
HERC1-211ENST00000560983 SETDB1Q15047 1291 aa6.01□□□□□ -1.45
HERC1-211ENST00000560983 NBPF8Q3BBV2 869 aa6.01□□□□□ -1.45
HERC1-211ENST00000560983 MAP4K3Q8IVH8 894 aa6.01□□□□□ -1.45
HERC1-211ENST00000560983 NSUN5Q96P11 429 aaKnown RBP6.01□□□□□ -1.45
HERC1-211ENST00000560983 PDGFDQ9GZP0 370 aaPredicted RBP6.01□□□□□ -1.45
HERC1-211ENST00000560983 CCDC9Q9Y3X0 531 aaKnown RBP6.01□□□□□ -1.45
HERC1-211ENST00000560983 CEP152O94986 1710 aa6.01□□□□□ -1.45
HERC1-211ENST00000560983 SPHKAPQ2M3C7 1700 aa6.01□□□□□ -1.45
HERC1-211ENST00000560983 LMTK2Q8IWU2 1503 aa6□□□□□ -1.45
HERC1-211ENST00000560983 EHBP1L1Q8N3D4 1523 aa6□□□□□ -1.45
HERC1-211ENST00000560983 FAM83GA6ND36 823 aa6□□□□□ -1.45
HERC1-211ENST00000560983 KIF4AO95239 1232 aa6□□□□□ -1.45
HERC1-211ENST00000560983 IREB2P48200 963 aaKnown RBP6□□□□□ -1.45
HERC1-211ENST00000560983 COL13A1Q5TAT6 717 aaPredicted RBP6□□□□□ -1.45
HERC1-211ENST00000560983 ZFP64Q9NPA5 681 aa6□□□□□ -1.45
HERC1-211ENST00000560983 FAM13BQ9NYF5 915 aa6□□□□□ -1.45
HERC1-211ENST00000560983 KANK1Q14678 1352 aa6□□□□□ -1.45
HERC1-211ENST00000560983 PARD3Q8TEW0 1356 aa6□□□□□ -1.45
HERC1-211ENST00000560983 CAMTA1Q9Y6Y1 1673 aa6□□□□□ -1.45
HERC1-211ENST00000560983 NPHP3Q7Z494 1330 aa5.99□□□□□ -1.45
HERC1-211ENST00000560983 DUOX2Q9NRD8 1548 aa5.99□□□□□ -1.45
HERC1-211ENST00000560983 BRWD3Q6RI45 1802 aa5.99□□□□□ -1.45
HERC1-211ENST00000560983 PXDNQ92626 1479 aa5.99□□□□□ -1.45
HERC1-211ENST00000560983 KIF15Q9NS87 1388 aa5.99□□□□□ -1.45
HERC1-211ENST00000560983 F8W735 103 aaPredicted RBP5.99□□□□□ -1.45
HERC1-211ENST00000560983 GHRHP01286 108 aa5.99□□□□□ -1.45
HERC1-211ENST00000560983 HSPA6P17066 643 aa5.99□□□□□ -1.45
HERC1-211ENST00000560983 ZAP70P43403 619 aa5.99□□□□□ -1.45
HERC1-211ENST00000560983 PRELPP51888 382 aa5.99□□□□□ -1.45
HERC1-211ENST00000560983 LRP8Q14114 963 aa5.99□□□□□ -1.45
HERC1-211ENST00000560983 PIK3R5Q8WYR1 880 aa5.99□□□□□ -1.45
HERC1-211ENST00000560983 PBXIP1Q96AQ6 731 aa5.99□□□□□ -1.45
HERC1-211ENST00000560983 MRPL18Q9H0U6 180 aaKnown RBP5.99□□□□□ -1.45
HERC1-211ENST00000560983 STIM2Q9P246 746 aa5.99□□□□□ -1.45
HERC1-211ENST00000560983 TRIM33Q9UPN9 1127 aa5.99□□□□□ -1.45
HERC1-211ENST00000560983 SPATA31A3Q5VYP0 1347 aa5.99□□□□□ -1.45
HERC1-211ENST00000560983 ZBTB39O15060 712 aa5.98□□□□□ -1.45
HERC1-211ENST00000560983 PRR23CQ6ZRP0 262 aa5.98□□□□□ -1.45
HERC1-211ENST00000560983 FAM196AQ6ZSG2 479 aa5.98□□□□□ -1.45
HERC1-211ENST00000560983 IL22RA1Q8N6P7 574 aa5.98□□□□□ -1.45
HERC1-211ENST00000560983 DNAJC5GQ8N7S2 189 aa5.98□□□□□ -1.45
HERC1-211ENST00000560983 DCAF11Q8TEB1 546 aa5.98□□□□□ -1.45
HERC1-211ENST00000560983 PSMG3-AS1Q96PY0 264 aa5.98□□□□□ -1.45
HERC1-211ENST00000560983 MKNK1Q9BUB5 465 aa5.98□□□□□ -1.45
HERC1-211ENST00000560983 ZMYND15Q9H091 742 aa5.98□□□□□ -1.45
HERC1-211ENST00000560983 MUC3BQ9H195 1237 aa5.98□□□□□ -1.45
HERC1-211ENST00000560983 AKTIPQ9H8T0 292 aa5.98□□□□□ -1.45
HERC1-211ENST00000560983 ERBINQ96RT1 1412 aa5.98□□□□□ -1.45
HERC1-211ENST00000560983 RPRD2Q5VT52 1461 aaKnown RBP5.97□□□□□ -1.45
HERC1-211ENST00000560983 ZBTB7AO95365 584 aa5.97□□□□□ -1.45
HERC1-211ENST00000560983 NAA30Q147X3 362 aaPredicted RBP5.97□□□□□ -1.45
HERC1-211ENST00000560983 GDF6Q6KF10 455 aaPredicted RBP5.97□□□□□ -1.45
HERC1-211ENST00000560983 ADAMTSL4Q6UY14 1074 aa5.97□□□□□ -1.45
HERC1-211ENST00000560983 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.97□□□□□ -1.45
HERC1-211ENST00000560983 SLC51AQ86UW1 340 aa5.97□□□□□ -1.45
HERC1-211ENST00000560983 ABTB2Q8N961 1025 aa5.97□□□□□ -1.45
HERC1-211ENST00000560983 RBSNQ9H1K0 784 aa5.97□□□□□ -1.45
HERC1-211ENST00000560983 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.96□□□□□ -1.45
HERC1-211ENST00000560983 TMEM131LA2VDJ0 1609 aa5.96□□□□□ -1.45
HERC1-211ENST00000560983 ROBO2Q9HCK4 1378 aa5.96□□□□□ -1.45
HERC1-211ENST00000560983 SCO2A0A1W2PP80 73 aa5.96□□□□□ -1.46
HERC1-211ENST00000560983 HYAL2Q12891 473 aa5.96□□□□□ -1.46
HERC1-211ENST00000560983 GALNT11Q8NCW6 608 aa5.96□□□□□ -1.46
HERC1-211ENST00000560983 KRTAP9-2Q9BYQ4 174 aa5.96□□□□□ -1.46
HERC1-211ENST00000560983 RNF112Q9ULX5 631 aa5.96□□□□□ -1.46
HERC1-211ENST00000560983 FNDC3AQ9Y2H6 1198 aaKnown RBP5.96□□□□□ -1.46
HERC1-211ENST00000560983 SPATA31A5Q5VU36 1347 aa5.96□□□□□ -1.46
HERC1-211ENST00000560983 SPATA31A7Q8IWB4 1347 aa5.96□□□□□ -1.46
HERC1-211ENST00000560983 ADGRL2O95490 1459 aa5.96□□□□□ -1.46
HERC1-211ENST00000560983 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.95□□□□□ -1.46
HERC1-211ENST00000560983 HYAL3O43820 417 aaPredicted RBP5.95□□□□□ -1.46
HERC1-211ENST00000560983 ATP11AP98196 1134 aa5.95□□□□□ -1.46
HERC1-211ENST00000560983 PDE12Q6L8Q7 609 aaKnown RBP5.95□□□□□ -1.46
HERC1-211ENST00000560983 XKR5Q6UX68 686 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms