RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 LRRFIP2Q9Y608 721 aaKnown RBP23.01■■□□□ 1.27
TPM1-224ENST00000560615 IPO8O15397 1037 aaKnown RBP23■■□□□ 1.27
TPM1-224ENST00000560615 SLF2Q8IX21 1173 aa23■■□□□ 1.27
TPM1-224ENST00000560615 SALL1Q9NSC2 1324 aa23■■□□□ 1.27
TPM1-224ENST00000560615 KIF22Q14807 665 aa22.99■■□□□ 1.27
TPM1-224ENST00000560615 CNKSR2Q8WXI2 1034 aa22.99■■□□□ 1.27
TPM1-224ENST00000560615 COPRSQ9NQ92 184 aa22.99■■□□□ 1.27
TPM1-224ENST00000560615 AKAP2Q9Y2D5 859 aa22.99■■□□□ 1.27
TPM1-224ENST00000560615 SLC34A2O95436 690 aa22.98■■□□□ 1.27
TPM1-224ENST00000560615 RARSP54136 660 aaKnown RBP22.98■■□□□ 1.27
TPM1-224ENST00000560615 PPATQ06203 517 aa22.98■■□□□ 1.27
TPM1-224ENST00000560615 PPIL2Q13356 520 aa22.98■■□□□ 1.27
TPM1-224ENST00000560615 PRPF38BQ5VTL8 546 aaKnown RBP22.98■■□□□ 1.27
TPM1-224ENST00000560615 DAGLAQ9Y4D2 1042 aa22.98■■□□□ 1.27
TPM1-224ENST00000560615 SNCAIPQ9Y6H5 919 aa22.98■■□□□ 1.27
TPM1-224ENST00000560615 ZBTB22O15209 634 aa22.97■■□□□ 1.27
TPM1-224ENST00000560615 PRDX5P30044 214 aa22.97■■□□□ 1.27
TPM1-224ENST00000560615 NBPF11Q86T75 865 aa22.97■■□□□ 1.27
TPM1-224ENST00000560615 ZKSCAN4Q969J2 545 aaPredicted RBP22.97■■□□□ 1.27
TPM1-224ENST00000560615 USP40Q9NVE5 1235 aa22.97■■□□□ 1.27
TPM1-224ENST00000560615 SPTY2D1Q68D10 685 aaPredicted RBP22.96■■□□□ 1.27
TPM1-224ENST00000560615 CDC42EP5Q6NZY7 148 aa22.96■■□□□ 1.27
TPM1-224ENST00000560615 MIGA2Q7L4E1 593 aa22.96■■□□□ 1.27
TPM1-224ENST00000560615 FAM43AQ8N2R8 423 aa22.96■■□□□ 1.27
TPM1-224ENST00000560615 IRF6O14896 467 aa22.95■■□□□ 1.26
TPM1-224ENST00000560615 TCP10Q12799 353 aa22.95■■□□□ 1.26
TPM1-224ENST00000560615 DIXDC1Q155Q3 683 aa22.95■■□□□ 1.26
TPM1-224ENST00000560615 CCDC102BQ68D86 513 aa22.95■■□□□ 1.26
TPM1-224ENST00000560615 MEIS3Q99687 375 aa22.95■■□□□ 1.26
TPM1-224ENST00000560615 TMEM106CQ9BVX2 250 aa22.95■■□□□ 1.26
TPM1-224ENST00000560615 PA2G4Q9UQ80 394 aaKnown RBP22.95■■□□□ 1.26
TPM1-224ENST00000560615 LAMB1P07942 1786 aa22.94■■□□□ 1.26
TPM1-224ENST00000560615 SRGAP3O43295 1099 aa22.94■■□□□ 1.26
TPM1-224ENST00000560615 TLR2O60603 784 aa22.94■■□□□ 1.26
TPM1-224ENST00000560615 PHKA1P46020 1223 aa22.94■■□□□ 1.26
TPM1-224ENST00000560615 MVPQ14764 893 aaKnown RBP22.94■■□□□ 1.26
TPM1-224ENST00000560615 DZIP1Q86YF9 867 aaKnown RBP22.94■■□□□ 1.26
TPM1-224ENST00000560615 GNRH1P01148 92 aa22.93■■□□□ 1.26
TPM1-224ENST00000560615 ARMC5Q96C12 935 aa22.93■■□□□ 1.26
TPM1-224ENST00000560615 PDS5AQ29RF7 1337 aaKnown RBP22.92■■□□□ 1.26
TPM1-224ENST00000560615 BTBD19C9JJ37 291 aa22.92■■□□□ 1.26
TPM1-224ENST00000560615 ENTPD3O75355 529 aa22.92■■□□□ 1.26
TPM1-224ENST00000560615 ABCF2Q9UG63 623 aa22.92■■□□□ 1.26
TPM1-224ENST00000560615 ZNF112Q9UJU3 913 aa22.92■■□□□ 1.26
TPM1-224ENST00000560615 INPP5BP32019 993 aa22.91■■□□□ 1.26
TPM1-224ENST00000560615 PRMT2P55345 433 aa22.91■■□□□ 1.26
TPM1-224ENST00000560615 MTX1Q13505 466 aa22.91■■□□□ 1.26
TPM1-224ENST00000560615 SLC9C1Q4G0N8 1177 aa22.91■■□□□ 1.26
TPM1-224ENST00000560615 GORABQ5T7V8 394 aa22.91■■□□□ 1.26
TPM1-224ENST00000560615 OTOFQ9HC10 1997 aa22.9■■□□□ 1.26
TPM1-224ENST00000560615 A0A1B0GUL7 405 aa22.9■■□□□ 1.26
TPM1-224ENST00000560615 TIMM10P62072 90 aa22.9■■□□□ 1.26
TPM1-224ENST00000560615 NFIAQ12857 509 aa22.9■■□□□ 1.26
TPM1-224ENST00000560615 NOL9Q5SY16 702 aaKnown RBP22.9■■□□□ 1.26
TPM1-224ENST00000560615 ANKRD23Q86SG2 305 aa22.9■■□□□ 1.26
TPM1-224ENST00000560615 ZSCAN29Q8IWY8 852 aaPredicted RBP22.9■■□□□ 1.26
TPM1-224ENST00000560615 IDI2Q9BXS1 227 aa22.9■■□□□ 1.26
TPM1-224ENST00000560615 GNAI2P04899 355 aa22.89■■□□□ 1.25
TPM1-224ENST00000560615 ERICH6Q7L0X2 663 aa22.89■■□□□ 1.25
TPM1-224ENST00000560615 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.89■■□□□ 1.25
TPM1-224ENST00000560615 FRAT1Q92837 279 aaPredicted RBP22.89■■□□□ 1.25
TPM1-224ENST00000560615 NEUROD6Q96NK8 337 aa22.89■■□□□ 1.25
TPM1-224ENST00000560615 FAM198AQ9UFP1 575 aa22.89■■□□□ 1.25
TPM1-224ENST00000560615 HOXD10P28358 340 aa22.88■■□□□ 1.25
TPM1-224ENST00000560615 ADORA1P30542 326 aa22.88■■□□□ 1.25
TPM1-224ENST00000560615 LACTBP83111 547 aaPredicted RBP22.88■■□□□ 1.25
TPM1-224ENST00000560615 TFCP2Q12800 502 aa22.88■■□□□ 1.25
TPM1-224ENST00000560615 G3BP1Q13283 466 aaKnown RBP eCLIP22.88■■□□□ 1.25
TPM1-224ENST00000560615 RASGRF1Q13972 1273 aa22.88■■□□□ 1.25
TPM1-224ENST00000560615 ATF7IPQ6VMQ6 1270 aa22.88■■□□□ 1.25
TPM1-224ENST00000560615 GCC1Q96CN9 775 aa22.88■■□□□ 1.25
TPM1-224ENST00000560615 FAM163AQ96GL9 167 aaPredicted RBP22.88■■□□□ 1.25
TPM1-224ENST00000560615 XAGE2Q96GT9 111 aa22.88■■□□□ 1.25
TPM1-224ENST00000560615 PICK1Q9NRD5 415 aa22.88■■□□□ 1.25
TPM1-224ENST00000560615 KCNH4Q9UQ05 1017 aa22.88■■□□□ 1.25
TPM1-224ENST00000560615 GAKO14976 1311 aa22.87■■□□□ 1.25
TPM1-224ENST00000560615 CXCL11O14625 94 aa22.87■■□□□ 1.25
TPM1-224ENST00000560615 LDHCP07864 332 aa22.87■■□□□ 1.25
TPM1-224ENST00000560615 RGS3P49796 1198 aa22.87■■□□□ 1.25
TPM1-224ENST00000560615 GSTO1P78417 241 aa22.87■■□□□ 1.25
TPM1-224ENST00000560615 POTEFA5A3E0 1075 aa22.86■■□□□ 1.25
TPM1-224ENST00000560615 PDHXO00330 501 aa22.86■■□□□ 1.25
TPM1-224ENST00000560615 MAP4K4O95819 1239 aaPredicted RBP22.86■■□□□ 1.25
TPM1-224ENST00000560615 SLC4A8Q2Y0W8 1093 aa22.86■■□□□ 1.25
TPM1-224ENST00000560615 PTCH2Q9Y6C5 1203 aa22.86■■□□□ 1.25
TPM1-224ENST00000560615 FASTKD5Q7L8L6 764 aaKnown RBP22.85■■□□□ 1.25
TPM1-224ENST00000560615 ZNF333Q96JL9 665 aa22.85■■□□□ 1.25
TPM1-224ENST00000560615 PARK7Q99497 189 aaKnown RBP22.85■■□□□ 1.25
TPM1-224ENST00000560615 TRIM27P14373 513 aa22.84■■□□□ 1.25
TPM1-224ENST00000560615 BTDP43251 543 aa22.84■■□□□ 1.25
TPM1-224ENST00000560615 C17orf99Q6UX52 265 aa22.84■■□□□ 1.25
TPM1-224ENST00000560615 SCYL3Q8IZE3 742 aa22.84■■□□□ 1.25
TPM1-224ENST00000560615 MYH13Q9UKX3 1938 aa22.84■■□□□ 1.25
TPM1-224ENST00000560615 MROH7-TTC4A0A0A0MT08 1334 aa22.83■■□□□ 1.25
TPM1-224ENST00000560615 UQCRFS1P1P0C7P4 283 aa22.82■■□□□ 1.24
TPM1-224ENST00000560615 PICALMQ13492 652 aa22.82■■□□□ 1.24
TPM1-224ENST00000560615 ZKSCAN2Q63HK3 967 aa22.82■■□□□ 1.24
TPM1-224ENST00000560615 SPATA5Q8NB90 893 aa22.82■■□□□ 1.24
TPM1-224ENST00000560615 NOL10Q9BSC4 688 aaKnown RBP22.82■■□□□ 1.24
TPM1-224ENST00000560615 CPA4Q9UI42 421 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms