RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 SLC5A1P13866 664 aa16.39■□□□□ 0.21
TPM1-220ENST00000559556 ATG9AQ7Z3C6 839 aa16.39■□□□□ 0.21
TPM1-220ENST00000559556 ERO1BQ86YB8 467 aa16.39■□□□□ 0.21
TPM1-220ENST00000559556 FAM43AQ8N2R8 423 aa16.39■□□□□ 0.21
TPM1-220ENST00000559556 WDR66Q8TBY9 1149 aa16.39■□□□□ 0.21
TPM1-220ENST00000559556 WRNIP1Q96S55 665 aa16.39■□□□□ 0.21
TPM1-220ENST00000559556 ZFYVE28Q9HCC9 887 aa16.39■□□□□ 0.21
TPM1-220ENST00000559556 ZCCHC17Q9NP64 241 aaKnown RBP16.39■□□□□ 0.21
TPM1-220ENST00000559556 SZT2Q5T011 3432 aa16.38■□□□□ 0.21
TPM1-220ENST00000559556 SIPA1L1O43166 1804 aa16.38■□□□□ 0.21
TPM1-220ENST00000559556 LPIN2Q92539 896 aa16.38■□□□□ 0.21
TPM1-220ENST00000559556 FBXO3Q9UK99 471 aa16.38■□□□□ 0.21
TPM1-220ENST00000559556 ALPK3Q96L96 1907 aa16.38■□□□□ 0.21
TPM1-220ENST00000559556 MYH1P12882 1939 aa16.37■□□□□ 0.21
TPM1-220ENST00000559556 CETPP11597 493 aa16.37■□□□□ 0.21
TPM1-220ENST00000559556 PPIL2Q13356 520 aa16.37■□□□□ 0.21
TPM1-220ENST00000559556 DCAF15Q66K64 600 aa16.37■□□□□ 0.21
TPM1-220ENST00000559556 ZKSCAN4Q969J2 545 aaPredicted RBP16.37■□□□□ 0.21
TPM1-220ENST00000559556 IRF6O14896 467 aa16.36■□□□□ 0.21
TPM1-220ENST00000559556 CIAO1O76071 339 aa16.36■□□□□ 0.21
TPM1-220ENST00000559556 SNAPC2Q13487 334 aa16.36■□□□□ 0.21
TPM1-220ENST00000559556 ARHGEF6Q15052 776 aa16.36■□□□□ 0.21
TPM1-220ENST00000559556 ZNF333Q96JL9 665 aa16.36■□□□□ 0.21
TPM1-220ENST00000559556 SMC4Q9NTJ3 1288 aa16.36■□□□□ 0.21
TPM1-220ENST00000559556 DAGLAQ9Y4D2 1042 aa16.36■□□□□ 0.21
TPM1-220ENST00000559556 BTBD19C9JJ37 291 aa16.35■□□□□ 0.21
TPM1-220ENST00000559556 ZBTB22O15209 634 aa16.35■□□□□ 0.21
TPM1-220ENST00000559556 TLR2O60603 784 aa16.35■□□□□ 0.21
TPM1-220ENST00000559556 UBTFL1P0CB47 393 aaPredicted RBP16.35■□□□□ 0.21
TPM1-220ENST00000559556 TRMT2AQ8IZ69 625 aaKnown RBP16.35■□□□□ 0.21
TPM1-220ENST00000559556 FAM151AQ8WW52 585 aa16.35■□□□□ 0.21
TPM1-220ENST00000559556 ZNF341Q9BYN7 854 aa16.35■□□□□ 0.21
TPM1-220ENST00000559556 PTCH2Q9Y6C5 1203 aa16.35■□□□□ 0.21
TPM1-220ENST00000559556 SALL1Q9NSC2 1324 aa16.35■□□□□ 0.21
TPM1-220ENST00000559556 WDHD1O75717 1129 aaPredicted RBP16.34■□□□□ 0.21
TPM1-220ENST00000559556 CT47B1P0C2W7 299 aaPredicted RBP16.34■□□□□ 0.21
TPM1-220ENST00000559556 PRDX5P30044 214 aa16.34■□□□□ 0.21
TPM1-220ENST00000559556 DIXDC1Q155Q3 683 aa16.34■□□□□ 0.21
TPM1-220ENST00000559556 ATP2B3Q16720 1220 aa16.34■□□□□ 0.21
TPM1-220ENST00000559556 SLC9C1Q4G0N8 1177 aa16.34■□□□□ 0.21
TPM1-220ENST00000559556 CDCA7LQ96GN5 454 aa16.34■□□□□ 0.21
TPM1-220ENST00000559556 SIL1Q9H173 461 aa16.34■□□□□ 0.21
TPM1-220ENST00000559556 RFX7Q2KHR2 1363 aa16.34■□□□□ 0.21
TPM1-220ENST00000559556 MYH8P13535 1937 aa16.33■□□□□ 0.21
TPM1-220ENST00000559556 INPP5BP32019 993 aa16.33■□□□□ 0.2
TPM1-220ENST00000559556 LACTBP83111 547 aaPredicted RBP16.33■□□□□ 0.2
TPM1-220ENST00000559556 PPATQ06203 517 aa16.33■□□□□ 0.2
TPM1-220ENST00000559556 CDC42EP5Q6NZY7 148 aa16.33■□□□□ 0.2
TPM1-220ENST00000559556 GCC1Q96CN9 775 aa16.33■□□□□ 0.2
TPM1-220ENST00000559556 ZNF112Q9UJU3 913 aa16.33■□□□□ 0.2
TPM1-220ENST00000559556 ATRNL1Q5VV63 1379 aa16.33■□□□□ 0.2
TPM1-220ENST00000559556 PLXNB2O15031 1838 aa16.32■□□□□ 0.2
TPM1-220ENST00000559556 SEMA3EO15041 775 aa16.32■□□□□ 0.2
TPM1-220ENST00000559556 LDHBP07195 334 aaKnown RBP16.32■□□□□ 0.2
TPM1-220ENST00000559556 EN2P19622 333 aaPredicted RBP16.32■□□□□ 0.2
TPM1-220ENST00000559556 NFIAQ12857 509 aa16.32■□□□□ 0.2
TPM1-220ENST00000559556 MIGA2Q7L4E1 593 aa16.32■□□□□ 0.2
TPM1-220ENST00000559556 NBPF11Q86T75 865 aa16.32■□□□□ 0.2
TPM1-220ENST00000559556 ADGRA2Q96PE1 1338 aa16.32■□□□□ 0.2
TPM1-220ENST00000559556 GNL3LQ9NVN8 582 aaKnown RBP16.32■□□□□ 0.2
TPM1-220ENST00000559556 CEP126Q9P2H0 1117 aa16.32■□□□□ 0.2
TPM1-220ENST00000559556 FAM198AQ9UFP1 575 aa16.32■□□□□ 0.2
TPM1-220ENST00000559556 KCNH4Q9UQ05 1017 aa16.32■□□□□ 0.2
TPM1-220ENST00000559556 GNRH1P01148 92 aa16.31■□□□□ 0.2
TPM1-220ENST00000559556 IL15P40933 162 aaPredicted RBP16.31■□□□□ 0.2
TPM1-220ENST00000559556 PHKA1P46020 1223 aa16.31■□□□□ 0.2
TPM1-220ENST00000559556 KIF22Q14807 665 aa16.31■□□□□ 0.2
TPM1-220ENST00000559556 NOL9Q5SY16 702 aaKnown RBP16.31■□□□□ 0.2
TPM1-220ENST00000559556 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.31■□□□□ 0.2
TPM1-220ENST00000559556 TMEM106CQ9BVX2 250 aa16.31■□□□□ 0.2
TPM1-220ENST00000559556 ARHGAP39Q9C0H5 1083 aa16.31■□□□□ 0.2
TPM1-220ENST00000559556 DENND2AQ9ULE3 1009 aa16.31■□□□□ 0.2
TPM1-220ENST00000559556 PDS5AQ29RF7 1337 aaKnown RBP16.3■□□□□ 0.2
TPM1-220ENST00000559556 TCP10Q12799 353 aa16.3■□□□□ 0.2
TPM1-220ENST00000559556 ANKRD23Q86SG2 305 aa16.3■□□□□ 0.2
TPM1-220ENST00000559556 COPRSQ9NQ92 184 aa16.3■□□□□ 0.2
TPM1-220ENST00000559556 HDAC5Q9UQL6 1122 aa16.3■□□□□ 0.2
TPM1-220ENST00000559556 LRRFIP2Q9Y608 721 aaKnown RBP16.3■□□□□ 0.2
TPM1-220ENST00000559556 FRMPD3Q5JV73 1810 aa16.29■□□□□ 0.2
TPM1-220ENST00000559556 GAKO14976 1311 aa16.29■□□□□ 0.2
TPM1-220ENST00000559556 PRMT2P55345 433 aa16.29■□□□□ 0.2
TPM1-220ENST00000559556 MOGSQ13724 837 aa16.29■□□□□ 0.2
TPM1-220ENST00000559556 C17orf99Q6UX52 265 aa16.29■□□□□ 0.2
TPM1-220ENST00000559556 API5Q9BZZ5 524 aaKnown RBP16.29■□□□□ 0.2
TPM1-220ENST00000559556 NOB1Q9ULX3 412 aaKnown RBP16.29■□□□□ 0.2
TPM1-220ENST00000559556 PA2G4Q9UQ80 394 aaKnown RBP16.29■□□□□ 0.2
TPM1-220ENST00000559556 DNAH12Q6ZR08 3092 aa16.28■□□□□ 0.2
TPM1-220ENST00000559556 CCDC102BQ68D86 513 aa16.28■□□□□ 0.2
TPM1-220ENST00000559556 ZGPATQ8N5A5 531 aaKnown RBP16.28■□□□□ 0.2
TPM1-220ENST00000559556 MEIS3Q99687 375 aa16.28■□□□□ 0.2
TPM1-220ENST00000559556 USP40Q9NVE5 1235 aa16.28■□□□□ 0.2
TPM1-220ENST00000559556 PDHXO00330 501 aa16.27■□□□□ 0.2
TPM1-220ENST00000559556 ADORA1P30542 326 aa16.27■□□□□ 0.2
TPM1-220ENST00000559556 RASGRF1Q13972 1273 aa16.27■□□□□ 0.2
TPM1-220ENST00000559556 SH3TC2Q8TF17 1288 aa16.27■□□□□ 0.2
TPM1-220ENST00000559556 IDI2Q9BXS1 227 aa16.27■□□□□ 0.2
TPM1-220ENST00000559556 MYH7P12883 1935 aa16.27■□□□□ 0.19
TPM1-220ENST00000559556 LAMA3Q16787 3333 aa16.27■□□□□ 0.19
TPM1-220ENST00000559556 ENTPD3O75355 529 aa16.26■□□□□ 0.19
TPM1-220ENST00000559556 CTGFP29279 349 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms