RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 SNX21Q969T3 373 aa19.84■□□□□ 0.77
TPM1-219ENST00000559397 TBC1D2Q9BYX2 928 aa19.84■□□□□ 0.77
TPM1-219ENST00000559397 PUS7LQ9H0K6 701 aaKnown RBP19.84■□□□□ 0.77
TPM1-219ENST00000559397 MYOZ2Q9NPC6 264 aa19.84■□□□□ 0.77
TPM1-219ENST00000559397 POTECB2RU33 542 aa19.83■□□□□ 0.76
TPM1-219ENST00000559397 EPS15P42566 896 aa19.83■□□□□ 0.76
TPM1-219ENST00000559397 IL17RAQ96F46 866 aa19.83■□□□□ 0.76
TPM1-219ENST00000559397 ZBED3Q96IU2 234 aaPredicted RBP19.83■□□□□ 0.76
TPM1-219ENST00000559397 ANO2Q9NQ90 1003 aa19.83■□□□□ 0.76
TPM1-219ENST00000559397 HELLSQ9NRZ9 838 aa19.83■□□□□ 0.76
TPM1-219ENST00000559397 SCN4AP35499 1836 aa19.83■□□□□ 0.76
TPM1-219ENST00000559397 H7C1D1 291 aa19.82■□□□□ 0.76
TPM1-219ENST00000559397 M0R2C6 588 aa19.82■□□□□ 0.76
TPM1-219ENST00000559397 EGFRP00533 1210 aa19.82■□□□□ 0.76
TPM1-219ENST00000559397 SLC4A3P48751 1232 aa19.82■□□□□ 0.76
TPM1-219ENST00000559397 PPP4CP60510 307 aa19.82■□□□□ 0.76
TPM1-219ENST00000559397 PRMT6Q96LA8 375 aaPredicted RBP19.82■□□□□ 0.76
TPM1-219ENST00000559397 RIOK1Q9BRS2 568 aaKnown RBP19.82■□□□□ 0.76
TPM1-219ENST00000559397 LSG1Q9H089 658 aaKnown RBP19.82■□□□□ 0.76
TPM1-219ENST00000559397 RAD50Q92878 1312 aa19.82■□□□□ 0.76
TPM1-219ENST00000559397 LMOD1P29536 600 aaPredicted RBP19.81■□□□□ 0.76
TPM1-219ENST00000559397 BTDP43251 543 aa19.81■□□□□ 0.76
TPM1-219ENST00000559397 SAMD7Q7Z3H4 446 aa19.81■□□□□ 0.76
TPM1-219ENST00000559397 MIGA1Q8NAN2 632 aa19.81■□□□□ 0.76
TPM1-219ENST00000559397 AATFQ9NY61 560 aaKnown RBP eCLIP19.81■□□□□ 0.76
TPM1-219ENST00000559397 DAXXQ9UER7 740 aaPredicted RBP19.81■□□□□ 0.76
TPM1-219ENST00000559397 SPDYE2BA6NHP3 402 aa19.81■□□□□ 0.76
TPM1-219ENST00000559397 SPDYE6P0CI01 402 aa19.81■□□□□ 0.76
TPM1-219ENST00000559397 RBM5P52756 815 aaKnown RBP eCLIP19.81■□□□□ 0.76
TPM1-219ENST00000559397 DYNLL1P63167 89 aaKnown RBP19.81■□□□□ 0.76
TPM1-219ENST00000559397 RABEP1Q15276 862 aa19.81■□□□□ 0.76
TPM1-219ENST00000559397 DLGAP5Q15398 846 aa19.81■□□□□ 0.76
TPM1-219ENST00000559397 MCMDC2Q4G0Z9 681 aa19.81■□□□□ 0.76
TPM1-219ENST00000559397 MAGEB6P1A0A0J9YX57 407 aa19.8■□□□□ 0.76
TPM1-219ENST00000559397 ANAPC15P60006 121 aa19.8■□□□□ 0.76
TPM1-219ENST00000559397 TBC1D10BQ4KMP7 808 aaPredicted RBP19.8■□□□□ 0.76
TPM1-219ENST00000559397 TRPM4Q8TD43 1214 aa19.8■□□□□ 0.76
TPM1-219ENST00000559397 ADARB2Q9NS39 739 aaKnown RBP19.8■□□□□ 0.76
TPM1-219ENST00000559397 HACL1Q9UJ83 578 aa19.8■□□□□ 0.76
TPM1-219ENST00000559397 WNT10BO00744 389 aa19.79■□□□□ 0.76
TPM1-219ENST00000559397 GPAA1O43292 621 aa19.79■□□□□ 0.76
TPM1-219ENST00000559397 BAG3O95817 575 aa19.79■□□□□ 0.76
TPM1-219ENST00000559397 RHBDL3P58872 404 aa19.79■□□□□ 0.76
TPM1-219ENST00000559397 KIF4BQ2VIQ3 1234 aa19.79■□□□□ 0.76
TPM1-219ENST00000559397 CCDC129Q6ZRS4 1044 aa19.79■□□□□ 0.76
TPM1-219ENST00000559397 ZNF589Q86UQ0 364 aaPredicted RBP19.79■□□□□ 0.76
TPM1-219ENST00000559397 LCORLQ8N3X6 602 aa19.79■□□□□ 0.76
TPM1-219ENST00000559397 MBD4O95243 580 aa19.78■□□□□ 0.76
TPM1-219ENST00000559397 MCCP23508 829 aa19.78■□□□□ 0.76
TPM1-219ENST00000559397 HIRAP54198 1017 aaPredicted RBP19.78■□□□□ 0.76
TPM1-219ENST00000559397 NBPF9Q3BBW0 867 aa19.78■□□□□ 0.76
TPM1-219ENST00000559397 RBM26Q5T8P6 1007 aaKnown RBP19.78■□□□□ 0.76
TPM1-219ENST00000559397 CDC42EP5Q6NZY7 148 aa19.78■□□□□ 0.76
TPM1-219ENST00000559397 AIDAQ96BJ3 306 aa19.78■□□□□ 0.76
TPM1-219ENST00000559397 STRBPQ96SI9 672 aaKnown RBP19.78■□□□□ 0.76
TPM1-219ENST00000559397 ARMT1Q9H993 441 aa19.78■□□□□ 0.76
TPM1-219ENST00000559397 ECM29Q5VYK3 1845 aa19.78■□□□□ 0.76
TPM1-219ENST00000559397 IQCA1LA6NCM1 817 aa19.78■□□□□ 0.76
TPM1-219ENST00000559397 HSPA4P34932 840 aa19.78■□□□□ 0.76
TPM1-219ENST00000559397 KIAA1211Q6ZU35 1233 aa19.78■□□□□ 0.76
TPM1-219ENST00000559397 CERS3Q8IU89 383 aa19.78■□□□□ 0.76
TPM1-219ENST00000559397 SH3RF3Q8TEJ3 882 aaPredicted RBP19.78■□□□□ 0.76
TPM1-219ENST00000559397 NOL10Q9BSC4 688 aaKnown RBP19.78■□□□□ 0.76
TPM1-219ENST00000559397 EPHX2P34913 555 aa19.77■□□□□ 0.76
TPM1-219ENST00000559397 TAF1DQ9H5J8 278 aaPredicted RBP19.77■□□□□ 0.76
TPM1-219ENST00000559397 TDRD3Q9H7E2 651 aaKnown RBP19.77■□□□□ 0.76
TPM1-219ENST00000559397 USP40Q9NVE5 1235 aa19.77■□□□□ 0.76
TPM1-219ENST00000559397 CDK5RAP2Q96SN8 1893 aa19.77■□□□□ 0.76
TPM1-219ENST00000559397 CCDC171Q6TFL3 1326 aa19.76■□□□□ 0.75
TPM1-219ENST00000559397 PLCG2P16885 1265 aa19.75■□□□□ 0.75
TPM1-219ENST00000559397 SPDYE2Q495Y8 402 aa19.75■□□□□ 0.75
TPM1-219ENST00000559397 USP50Q70EL3 339 aaPredicted RBP19.75■□□□□ 0.75
TPM1-219ENST00000559397 RRAGCQ9HB90 399 aa19.75■□□□□ 0.75
TPM1-219ENST00000559397 PALD1Q9ULE6 856 aa19.75■□□□□ 0.75
TPM1-219ENST00000559397 FOCADQ5VW36 1801 aa19.75■□□□□ 0.75
TPM1-219ENST00000559397 WDHD1O75717 1129 aaPredicted RBP19.75■□□□□ 0.75
TPM1-219ENST00000559397 PTH1RQ03431 593 aa19.75■□□□□ 0.75
TPM1-219ENST00000559397 HSCBQ8IWL3 235 aa19.75■□□□□ 0.75
TPM1-219ENST00000559397 ASTN2O75129 1339 aaPredicted RBP19.74■□□□□ 0.75
TPM1-219ENST00000559397 FOXP2O15409 715 aa19.74■□□□□ 0.75
TPM1-219ENST00000559397 PRKAB2O43741 272 aa19.74■□□□□ 0.75
TPM1-219ENST00000559397 VEGFAP15692 232 aaPredicted RBP19.74■□□□□ 0.75
TPM1-219ENST00000559397 VPS53Q5VIR6 699 aa19.74■□□□□ 0.75
TPM1-219ENST00000559397 TEX11Q8IYF3 940 aa19.74■□□□□ 0.75
TPM1-219ENST00000559397 KCNB2Q92953 911 aa19.74■□□□□ 0.75
TPM1-219ENST00000559397 ZNF70Q9UC06 446 aaPredicted RBP19.74■□□□□ 0.75
TPM1-219ENST00000559397 CLRN2A0PK11 232 aa19.73■□□□□ 0.75
TPM1-219ENST00000559397 MYO1BO43795 1136 aa19.73■□□□□ 0.75
TPM1-219ENST00000559397 GNAT2P19087 354 aa19.73■□□□□ 0.75
TPM1-219ENST00000559397 ZNF526Q8TF50 670 aaPredicted RBP19.73■□□□□ 0.75
TPM1-219ENST00000559397 MAP4K1Q92918 833 aa19.73■□□□□ 0.75
TPM1-219ENST00000559397 CRNKL1Q9BZJ0 848 aaKnown RBP19.73■□□□□ 0.75
TPM1-219ENST00000559397 NMRK2Q9NPI5 230 aa19.73■□□□□ 0.75
TPM1-219ENST00000559397 SLC4A4Q9Y6R1 1079 aa19.73■□□□□ 0.75
TPM1-219ENST00000559397 PATL2C9JE40 543 aaKnown RBP19.72■□□□□ 0.75
TPM1-219ENST00000559397 CD2BP2O95400 341 aaKnown RBP19.72■□□□□ 0.75
TPM1-219ENST00000559397 HSPD1P10809 573 aaKnown RBP19.72■□□□□ 0.75
TPM1-219ENST00000559397 CACNB3P54284 484 aa19.72■□□□□ 0.75
TPM1-219ENST00000559397 NFIAQ12857 509 aa19.72■□□□□ 0.75
TPM1-219ENST00000559397 IL27Q8NEV9 243 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms