RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 GMLQ99445 158 aa6.4□□□□□ -1.38
TRAV15-201ENST00000556680 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.4□□□□□ -1.38
TRAV15-201ENST00000556680 UBP1Q9NZI7 540 aa6.4□□□□□ -1.38
TRAV15-201ENST00000556680 ROBO2Q9HCK4 1378 aa6.4□□□□□ -1.39
TRAV15-201ENST00000556680 RSF1Q96T23 1441 aaPredicted RBP6.4□□□□□ -1.39
TRAV15-201ENST00000556680 TLR3O15455 904 aaKnown RBP6.39□□□□□ -1.39
TRAV15-201ENST00000556680 BPNT1O95861 308 aa6.39□□□□□ -1.39
TRAV15-201ENST00000556680 F13A1P00488 732 aa6.39□□□□□ -1.39
TRAV15-201ENST00000556680 NID1P14543 1247 aa6.39□□□□□ -1.39
TRAV15-201ENST00000556680 GARTP22102 1010 aa6.39□□□□□ -1.39
TRAV15-201ENST00000556680 NLRP12P59046 1061 aa6.39□□□□□ -1.39
TRAV15-201ENST00000556680 SEPT6Q14141 434 aa6.39□□□□□ -1.39
TRAV15-201ENST00000556680 SETDB1Q15047 1291 aa6.39□□□□□ -1.39
TRAV15-201ENST00000556680 FAM196AQ6ZSG2 479 aa6.39□□□□□ -1.39
TRAV15-201ENST00000556680 DCAF11Q8TEB1 546 aa6.39□□□□□ -1.39
TRAV15-201ENST00000556680 CPLX3Q8WVH0 158 aa6.39□□□□□ -1.39
TRAV15-201ENST00000556680 GATAD2BQ8WXI9 593 aa6.39□□□□□ -1.39
TRAV15-201ENST00000556680 USP26Q9BXU7 913 aa6.39□□□□□ -1.39
TRAV15-201ENST00000556680 KCNQ5Q9NR82 932 aa6.39□□□□□ -1.39
TRAV15-201ENST00000556680 EFR3BQ9Y2G0 817 aa6.39□□□□□ -1.39
TRAV15-201ENST00000556680 TRIM37O94972 964 aa6.38□□□□□ -1.39
TRAV15-201ENST00000556680 SSBP05455 408 aaKnown RBP eCLIP6.38□□□□□ -1.39
TRAV15-201ENST00000556680 MCM4P33991 863 aa6.38□□□□□ -1.39
TRAV15-201ENST00000556680 CD68P34810 354 aaPredicted RBP6.38□□□□□ -1.39
TRAV15-201ENST00000556680 NASPP49321 788 aaPredicted RBP6.38□□□□□ -1.39
TRAV15-201ENST00000556680 RAC1P63000 192 aa6.38□□□□□ -1.39
TRAV15-201ENST00000556680 PDE3AQ14432 1141 aa6.38□□□□□ -1.39
TRAV15-201ENST00000556680 CWF19L2Q2TBE0 894 aaKnown RBP6.38□□□□□ -1.39
TRAV15-201ENST00000556680 SEZ6Q53EL9 994 aa6.38□□□□□ -1.39
TRAV15-201ENST00000556680 SCARA3Q6AZY7 606 aa6.38□□□□□ -1.39
TRAV15-201ENST00000556680 PDZD3Q86UT5 571 aa6.38□□□□□ -1.39
TRAV15-201ENST00000556680 DHX38Q92620 1227 aaKnown RBP6.38□□□□□ -1.39
TRAV15-201ENST00000556680 GINM1Q9NU53 330 aa6.38□□□□□ -1.39
TRAV15-201ENST00000556680 EIF4G1Q04637 1599 aaKnown RBP6.38□□□□□ -1.39
TRAV15-201ENST00000556680 SPDYE3A6NKU9 549 aa6.37□□□□□ -1.39
TRAV15-201ENST00000556680 PIK3R2O00459 728 aa6.37□□□□□ -1.39
TRAV15-201ENST00000556680 DGKGP49619 791 aa6.37□□□□□ -1.39
TRAV15-201ENST00000556680 ZNF252P-AS1Q0IIN9 211 aa6.37□□□□□ -1.39
TRAV15-201ENST00000556680 COL9A3Q14050 684 aaPredicted RBP6.37□□□□□ -1.39
TRAV15-201ENST00000556680 COL9A2Q14055 689 aaPredicted RBP6.37□□□□□ -1.39
TRAV15-201ENST00000556680 HP1BP3Q5SSJ5 553 aaPredicted RBP6.37□□□□□ -1.39
TRAV15-201ENST00000556680 LCE2CQ5TA81 110 aa6.37□□□□□ -1.39
TRAV15-201ENST00000556680 ZNF385CQ66K41 422 aaPredicted RBP6.37□□□□□ -1.39
TRAV15-201ENST00000556680 MPRIPQ6WCQ1 1025 aa6.37□□□□□ -1.39
TRAV15-201ENST00000556680 DTWD1Q8N5C7 304 aa6.37□□□□□ -1.39
TRAV15-201ENST00000556680 GALNT11Q8NCW6 608 aa6.37□□□□□ -1.39
TRAV15-201ENST00000556680 FBXO27Q8NI29 283 aa6.37□□□□□ -1.39
TRAV15-201ENST00000556680 RAD18Q9NS91 495 aa6.37□□□□□ -1.39
TRAV15-201ENST00000556680 PCDHA4Q9UN74 947 aa6.37□□□□□ -1.39
TRAV15-201ENST00000556680 FAM221AA4D161 298 aa6.36□□□□□ -1.39
TRAV15-201ENST00000556680 DDX3YO15523 660 aaKnown RBP6.36□□□□□ -1.39
TRAV15-201ENST00000556680 CILPO75339 1184 aa6.36□□□□□ -1.39
TRAV15-201ENST00000556680 STK10O94804 968 aaKnown RBP6.36□□□□□ -1.39
TRAV15-201ENST00000556680 ECEL1O95672 775 aa6.36□□□□□ -1.39
TRAV15-201ENST00000556680 SLFN14P0C7P3 912 aa6.36□□□□□ -1.39
TRAV15-201ENST00000556680 CRKP46108 304 aa6.36□□□□□ -1.39
TRAV15-201ENST00000556680 PTPN11Q06124 597 aaPredicted RBP6.36□□□□□ -1.39
TRAV15-201ENST00000556680 TRIM28Q13263 835 aaKnown RBP6.36□□□□□ -1.39
TRAV15-201ENST00000556680 MPP2Q14168 576 aa6.36□□□□□ -1.39
TRAV15-201ENST00000556680 MCF2L2Q86YR7 1114 aa6.36□□□□□ -1.39
TRAV15-201ENST00000556680 SLITRK4Q8IW52 837 aa6.36□□□□□ -1.39
TRAV15-201ENST00000556680 GPBAR1Q8TDU6 330 aa6.36□□□□□ -1.39
TRAV15-201ENST00000556680 PLVAPQ9BX97 442 aa6.36□□□□□ -1.39
TRAV15-201ENST00000556680 CCDC86Q9H6F5 360 aaKnown RBP6.36□□□□□ -1.39
TRAV15-201ENST00000556680 KRT82Q9NSB4 513 aa6.36□□□□□ -1.39
TRAV15-201ENST00000556680 TOP2AP11388 1531 aaKnown RBP6.35□□□□□ -1.39
TRAV15-201ENST00000556680 DEAF1O75398 565 aaPredicted RBP6.35□□□□□ -1.39
TRAV15-201ENST00000556680 LIG1P18858 919 aa6.35□□□□□ -1.39
TRAV15-201ENST00000556680 ZNF165P49910 485 aa6.35□□□□□ -1.39
TRAV15-201ENST00000556680 RPL6Q02878 288 aaKnown RBP6.35□□□□□ -1.39
TRAV15-201ENST00000556680 DUOXA2Q1HG44 320 aa6.35□□□□□ -1.39
TRAV15-201ENST00000556680 FBXW10Q5XX13 1052 aa6.35□□□□□ -1.39
TRAV15-201ENST00000556680 FBXO11Q86XK2 927 aa6.35□□□□□ -1.39
TRAV15-201ENST00000556680 DNAJC2Q99543 621 aaKnown RBP6.35□□□□□ -1.39
TRAV15-201ENST00000556680 A0A0A0MRY4 1105 aa6.34□□□□□ -1.39
TRAV15-201ENST00000556680 FGRP09769 529 aa6.34□□□□□ -1.39
TRAV15-201ENST00000556680 SOX9P48436 509 aa6.34□□□□□ -1.39
TRAV15-201ENST00000556680 SNRPNP63162 240 aaKnown RBP6.34□□□□□ -1.39
TRAV15-201ENST00000556680 ILDR2Q71H61 639 aa6.34□□□□□ -1.39
TRAV15-201ENST00000556680 HDXQ7Z353 690 aa6.34□□□□□ -1.39
TRAV15-201ENST00000556680 FMR1NBQ8N0W7 255 aaPredicted RBP6.34□□□□□ -1.39
TRAV15-201ENST00000556680 GAL3ST3Q96A11 431 aa6.34□□□□□ -1.39
TRAV15-201ENST00000556680 ELMO3Q96BJ8 720 aa6.34□□□□□ -1.39
TRAV15-201ENST00000556680 ARMC5Q96C12 935 aa6.34□□□□□ -1.39
TRAV15-201ENST00000556680 FERD3LQ96RJ6 166 aa6.34□□□□□ -1.39
TRAV15-201ENST00000556680 CRBNQ96SW2 442 aa6.34□□□□□ -1.39
TRAV15-201ENST00000556680 HIRIP3Q9BW71 556 aaPredicted RBP6.34□□□□□ -1.39
TRAV15-201ENST00000556680 LRRC3Q9BY71 257 aa6.34□□□□□ -1.39
TRAV15-201ENST00000556680 NRSN2Q9GZP1 204 aa6.34□□□□□ -1.39
TRAV15-201ENST00000556680 BRMS1Q9HCU9 246 aa6.34□□□□□ -1.39
TRAV15-201ENST00000556680 MKL2Q9ULH7 1088 aa6.34□□□□□ -1.39
TRAV15-201ENST00000556680 STRIP2Q9ULQ0 834 aa6.34□□□□□ -1.39
TRAV15-201ENST00000556680 SMARCA2P51531 1590 aa6.34□□□□□ -1.39
TRAV15-201ENST00000556680 LOC100289279A0A1B0GTE1 492 aa6.33□□□□□ -1.4
TRAV15-201ENST00000556680 GNB5O14775 395 aa6.33□□□□□ -1.4
TRAV15-201ENST00000556680 ADAM11O75078 769 aa6.33□□□□□ -1.4
TRAV15-201ENST00000556680 CTSBP07858 339 aa6.33□□□□□ -1.4
TRAV15-201ENST00000556680 HOXB4P17483 251 aaPredicted RBP6.33□□□□□ -1.4
TRAV15-201ENST00000556680 FOXD4L6Q3SYB3 417 aaPredicted RBP6.33□□□□□ -1.4
TRAV15-201ENST00000556680 PRRT3Q5FWE3 981 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms