RNA–Protein interactions for RNA: ENST00000556119.5

ABCD4-224, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-224ENST00000556119 CACNB3P54284 484 aa17.01■□□□□ 0.31
ABCD4-224ENST00000556119 KSR2Q6VAB6 950 aa17.01■□□□□ 0.31
ABCD4-224ENST00000556119 CCDC146Q8IYE0 955 aa17.01■□□□□ 0.31
ABCD4-224ENST00000556119 PI4KAP1Q8N8J0 262 aa17.01■□□□□ 0.31
ABCD4-224ENST00000556119 KCNH4Q9UQ05 1017 aa17.01■□□□□ 0.31
ABCD4-224ENST00000556119 COL9A1P20849 921 aa17■□□□□ 0.31
ABCD4-224ENST00000556119 INPP5BP32019 993 aa17■□□□□ 0.31
ABCD4-224ENST00000556119 DDX60LQ5H9U9 1706 aaKnown RBP17■□□□□ 0.31
ABCD4-224ENST00000556119 GPAT2Q6NUI2 795 aa17■□□□□ 0.31
ABCD4-224ENST00000556119 FAM161BQ96MY7 647 aa17■□□□□ 0.31
ABCD4-224ENST00000556119 IRF5Q13568 498 aa16.99■□□□□ 0.31
ABCD4-224ENST00000556119 ANKLE1Q8NAG6 615 aa16.99■□□□□ 0.31
ABCD4-224ENST00000556119 TDRD7Q8NHU6 1098 aaKnown RBP16.99■□□□□ 0.31
ABCD4-224ENST00000556119 ZNF853P0CG23 659 aa16.98■□□□□ 0.31
ABCD4-224ENST00000556119 CASP7P55210 303 aa16.98■□□□□ 0.31
ABCD4-224ENST00000556119 NEXNQ0ZGT2 675 aa16.98■□□□□ 0.31
ABCD4-224ENST00000556119 GRIK5Q16478 980 aa16.98■□□□□ 0.31
ABCD4-224ENST00000556119 MIGA2Q7L4E1 593 aa16.98■□□□□ 0.31
ABCD4-224ENST00000556119 PARK7Q99497 189 aaKnown RBP16.98■□□□□ 0.31
ABCD4-224ENST00000556119 NBPF3Q9H094 633 aa16.98■□□□□ 0.31
ABCD4-224ENST00000556119 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.98■□□□□ 0.319e-6■■□□□ 13.2
ABCD4-224ENST00000556119 AK9Q5TCS8 1911 aa16.98■□□□□ 0.31
ABCD4-224ENST00000556119 ANKRD18BA2A2Z9 1011 aa16.97■□□□□ 0.31
ABCD4-224ENST00000556119 C8orf58Q8NAV2 365 aa16.97■□□□□ 0.31
ABCD4-224ENST00000556119 DCAF15Q66K64 600 aa16.96■□□□□ 0.31
ABCD4-224ENST00000556119 FAM83AQ86UY5 434 aa16.96■□□□□ 0.31
ABCD4-224ENST00000556119 CCER1Q8TC90 406 aaPredicted RBP16.96■□□□□ 0.31
ABCD4-224ENST00000556119 HOOK2Q96ED9 719 aa16.96■□□□□ 0.31
ABCD4-224ENST00000556119 ZNF341Q9BYN7 854 aa16.96■□□□□ 0.31
ABCD4-224ENST00000556119 COL2A1P02458 1487 aaPredicted RBP16.96■□□□□ 0.31
ABCD4-224ENST00000556119 TNPO2O14787 897 aaKnown RBP16.95■□□□□ 0.3
ABCD4-224ENST00000556119 GCKRQ14397 625 aa16.95■□□□□ 0.3
ABCD4-224ENST00000556119 C11orf49Q9H6J7 331 aa16.95■□□□□ 0.3
ABCD4-224ENST00000556119 RAPGEFL1Q9UHV5 662 aa16.95■□□□□ 0.3
ABCD4-224ENST00000556119 ZNF112Q9UJU3 913 aa16.95■□□□□ 0.3
ABCD4-224ENST00000556119 PLIN1O60240 522 aa16.94■□□□□ 0.3
ABCD4-224ENST00000556119 GYG1P46976 350 aa16.94■□□□□ 0.3
ABCD4-224ENST00000556119 HDLBPQ00341 1268 aaKnown RBP16.94■□□□□ 0.3
ABCD4-224ENST00000556119 FKBP1CQ5VVH2 108 aa16.94■□□□□ 0.3
ABCD4-224ENST00000556119 CCDC30Q5VVM6 783 aa16.94■□□□□ 0.3
ABCD4-224ENST00000556119 FAM84BQ96KN1 310 aaPredicted RBP16.94■□□□□ 0.3
ABCD4-224ENST00000556119 TAOK2Q9UL54 1235 aa16.94■□□□□ 0.3
ABCD4-224ENST00000556119 PTPRFP10586 1907 aa16.94■□□□□ 0.3
ABCD4-224ENST00000556119 RUNDC1Q96C34 613 aa16.93■□□□□ 0.3
ABCD4-224ENST00000556119 CDX2Q99626 313 aaPredicted RBP16.93■□□□□ 0.3
ABCD4-224ENST00000556119 CXCL11O14625 94 aa16.92■□□□□ 0.3
ABCD4-224ENST00000556119 HIBADHP31937 336 aaKnown RBP16.92■□□□□ 0.3
ABCD4-224ENST00000556119 MDM2Q00987 491 aaPredicted RBP16.92■□□□□ 0.3
ABCD4-224ENST00000556119 IFIT5Q13325 482 aaKnown RBP16.92■□□□□ 0.3
ABCD4-224ENST00000556119 MAFAQ8NHW3 353 aaPredicted RBP16.92■□□□□ 0.3
ABCD4-224ENST00000556119 PFASO15067 1338 aa16.92■□□□□ 0.3
ABCD4-224ENST00000556119 RPAP1Q9BWH6 1393 aaPredicted RBP16.91■□□□□ 0.3
ABCD4-224ENST00000556119 FOXO4P98177 505 aa16.91■□□□□ 0.3
ABCD4-224ENST00000556119 TRIM32Q13049 653 aa16.91■□□□□ 0.3
ABCD4-224ENST00000556119 APOBEC3HQ6NTF7 200 aaKnown RBP16.91■□□□□ 0.3
ABCD4-224ENST00000556119 TEKT1Q969V4 418 aa16.91■□□□□ 0.3
ABCD4-224ENST00000556119 ZNF594Q96JF6 807 aaPredicted RBP16.91■□□□□ 0.3
ABCD4-224ENST00000556119 ZDHHC15Q96MV8 337 aa16.91■□□□□ 0.3
ABCD4-224ENST00000556119 TMOD2Q9NZR1 351 aa16.91■□□□□ 0.3
ABCD4-224ENST00000556119 OGDHLQ9ULD0 1010 aa16.91■□□□□ 0.3
ABCD4-224ENST00000556119 NOL9Q5SY16 702 aaKnown RBP16.9■□□□□ 0.3
ABCD4-224ENST00000556119 ZNF697Q5TEC3 545 aa16.9■□□□□ 0.3
ABCD4-224ENST00000556119 G2E3Q7L622 706 aa16.9■□□□□ 0.3
ABCD4-224ENST00000556119 SYMPKQ92797 1274 aaKnown RBP16.9■□□□□ 0.3
ABCD4-224ENST00000556119 COA7Q96BR5 231 aa16.9■□□□□ 0.3
ABCD4-224ENST00000556119 IFT57Q9NWB7 429 aa16.9■□□□□ 0.3
ABCD4-224ENST00000556119 A0A0G2JLL6 359 aaPredicted RBP16.89■□□□□ 0.29
ABCD4-224ENST00000556119 HMGCRP04035 888 aa16.89■□□□□ 0.29
ABCD4-224ENST00000556119 LDHAL6AQ6ZMR3 332 aa16.89■□□□□ 0.29
ABCD4-224ENST00000556119 FASTKD5Q7L8L6 764 aaKnown RBP16.89■□□□□ 0.29
ABCD4-224ENST00000556119 PRRT2Q7Z6L0 340 aaPredicted RBP16.89■□□□□ 0.29
ABCD4-224ENST00000556119 TSPYL6Q8N831 410 aa16.89■□□□□ 0.29
ABCD4-224ENST00000556119 MRIQ9BWK5 157 aa16.89■□□□□ 0.29
ABCD4-224ENST00000556119 HMX1Q9NP08 348 aaPredicted RBP16.89■□□□□ 0.29
ABCD4-224ENST00000556119 GNAI1P63096 354 aa16.88■□□□□ 0.29
ABCD4-224ENST00000556119 UBE4AQ14139 1066 aa16.88■□□□□ 0.29
ABCD4-224ENST00000556119 CHMP4AQ9BY43 222 aa16.88■□□□□ 0.29
ABCD4-224ENST00000556119 SEMA6BQ9H3T3 888 aa16.88■□□□□ 0.29
ABCD4-224ENST00000556119 IQSEC3Q9UPP2 1182 aaPredicted RBP16.88■□□□□ 0.29
ABCD4-224ENST00000556119 SLC45A1Q9Y2W3 748 aa16.88■□□□□ 0.29
ABCD4-224ENST00000556119 PLXNB2O15031 1838 aa16.88■□□□□ 0.29
ABCD4-224ENST00000556119 PHIPQ8WWQ0 1821 aa16.88■□□□□ 0.29
ABCD4-224ENST00000556119 COL6A1P12109 1028 aa16.87■□□□□ 0.29
ABCD4-224ENST00000556119 PLA2G5P39877 138 aa16.87■□□□□ 0.29
ABCD4-224ENST00000556119 LRRC26Q2I0M4 334 aa16.87■□□□□ 0.29
ABCD4-224ENST00000556119 GADL1Q6ZQY3 521 aa16.87■□□□□ 0.29
ABCD4-224ENST00000556119 FAM151AQ8WW52 585 aa16.87■□□□□ 0.29
ABCD4-224ENST00000556119 CNNM1Q9NRU3 951 aa16.87■□□□□ 0.29
ABCD4-224ENST00000556119 GJD2Q9UKL4 321 aa16.87■□□□□ 0.29
ABCD4-224ENST00000556119 CHMP3Q9Y3E7 222 aa16.87■□□□□ 0.29
ABCD4-224ENST00000556119 ZHX2Q9Y6X8 837 aa16.87■□□□□ 0.29
ABCD4-224ENST00000556119 NCOR1O75376 2440 aa16.87■□□□□ 0.29
ABCD4-224ENST00000556119 CHAF1AQ13111 956 aaPredicted RBP16.86■□□□□ 0.29
ABCD4-224ENST00000556119 FBXO33Q7Z6M2 555 aa16.86■□□□□ 0.29
ABCD4-224ENST00000556119 ANKRD13CQ8N6S4 541 aa16.86■□□□□ 0.29
ABCD4-224ENST00000556119 SMCR8Q8TEV9 937 aaPredicted RBP16.86■□□□□ 0.29
ABCD4-224ENST00000556119 MYLIPQ8WY64 445 aa16.86■□□□□ 0.29
ABCD4-224ENST00000556119 MYH16Q9H6N6 1097 aa16.86■□□□□ 0.29
ABCD4-224ENST00000556119 TNFRSF10AO00220 468 aa16.85■□□□□ 0.29
ABCD4-224ENST00000556119 TCP10Q12799 353 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms