RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 SALL1Q9NSC2 1324 aa23.42■■□□□ 1.34
CDKN3-209ENST00000556102 SEMA3EO15041 775 aa23.42■■□□□ 1.34
CDKN3-209ENST00000556102 RARSP54136 660 aaKnown RBP23.42■■□□□ 1.34
CDKN3-209ENST00000556102 DIXDC1Q155Q3 683 aa23.42■■□□□ 1.34
CDKN3-209ENST00000556102 FAM151AQ8WW52 585 aa23.42■■□□□ 1.34
CDKN3-209ENST00000556102 ZKSCAN4Q969J2 545 aaPredicted RBP23.42■■□□□ 1.34
CDKN3-209ENST00000556102 MEIS3Q99687 375 aa23.42■■□□□ 1.34
CDKN3-209ENST00000556102 ZNF341Q9BYN7 854 aa23.42■■□□□ 1.34
CDKN3-209ENST00000556102 COPRSQ9NQ92 184 aa23.42■■□□□ 1.34
CDKN3-209ENST00000556102 DENND2AQ9ULE3 1009 aa23.42■■□□□ 1.34
CDKN3-209ENST00000556102 LDHBP07195 334 aaKnown RBP23.41■■□□□ 1.34
CDKN3-209ENST00000556102 PHKA1P46020 1223 aa23.41■■□□□ 1.34
CDKN3-209ENST00000556102 INTS3Q68E01 1043 aaKnown RBP23.41■■□□□ 1.34
CDKN3-209ENST00000556102 FAM43AQ8N2R8 423 aa23.41■■□□□ 1.34
CDKN3-209ENST00000556102 ZBTB22O15209 634 aa23.4■■□□□ 1.34
CDKN3-209ENST00000556102 CETPP11597 493 aa23.4■■□□□ 1.34
CDKN3-209ENST00000556102 PPIL2Q13356 520 aa23.4■■□□□ 1.34
CDKN3-209ENST00000556102 CDC42EP5Q6NZY7 148 aa23.4■■□□□ 1.34
CDKN3-209ENST00000556102 ARHGAP45Q92619 1136 aa23.4■■□□□ 1.34
CDKN3-209ENST00000556102 KIAA0100Q14667 2235 aaKnown RBP23.4■■□□□ 1.34
CDKN3-209ENST00000556102 RBBP6Q7Z6E9 1792 aaKnown RBP23.4■■□□□ 1.34
CDKN3-209ENST00000556102 MYH2Q9UKX2 1941 aa23.39■■□□□ 1.34
CDKN3-209ENST00000556102 IRF6O14896 467 aa23.39■■□□□ 1.33
CDKN3-209ENST00000556102 WDHD1O75717 1129 aaPredicted RBP23.39■■□□□ 1.33
CDKN3-209ENST00000556102 CAP1Q01518 475 aa23.39■■□□□ 1.33
CDKN3-209ENST00000556102 SNAPC2Q13487 334 aa23.39■■□□□ 1.33
CDKN3-209ENST00000556102 PRPF38BQ5VTL8 546 aaKnown RBP23.39■■□□□ 1.33
CDKN3-209ENST00000556102 ZCCHC17Q9NP64 241 aaKnown RBP23.39■■□□□ 1.33
CDKN3-209ENST00000556102 TCP10Q12799 353 aa23.38■■□□□ 1.33
CDKN3-209ENST00000556102 ARHGEF6Q15052 776 aa23.38■■□□□ 1.33
CDKN3-209ENST00000556102 MIGA2Q7L4E1 593 aa23.38■■□□□ 1.33
CDKN3-209ENST00000556102 GNAI3P08754 354 aa23.37■■□□□ 1.33
CDKN3-209ENST00000556102 ADORA1P30542 326 aa23.37■■□□□ 1.33
CDKN3-209ENST00000556102 INPP5BP32019 993 aa23.37■■□□□ 1.33
CDKN3-209ENST00000556102 PPATQ06203 517 aa23.37■■□□□ 1.33
CDKN3-209ENST00000556102 NFIAQ12857 509 aa23.37■■□□□ 1.33
CDKN3-209ENST00000556102 CCDC102BQ68D86 513 aa23.37■■□□□ 1.33
CDKN3-209ENST00000556102 ZGPATQ8N5A5 531 aaKnown RBP23.37■■□□□ 1.33
CDKN3-209ENST00000556102 ARMC5Q96C12 935 aa23.37■■□□□ 1.33
CDKN3-209ENST00000556102 CENPFP49454 3210 aa23.37■■□□□ 1.33
CDKN3-209ENST00000556102 BTBD19C9JJ37 291 aa23.36■■□□□ 1.33
CDKN3-209ENST00000556102 USP40Q9NVE5 1235 aa23.36■■□□□ 1.33
CDKN3-209ENST00000556102 FAM198AQ9UFP1 575 aa23.36■■□□□ 1.33
CDKN3-209ENST00000556102 ZNF112Q9UJU3 913 aa23.36■■□□□ 1.33
CDKN3-209ENST00000556102 TLR2O60603 784 aa23.35■■□□□ 1.33
CDKN3-209ENST00000556102 MTX1Q13505 466 aa23.35■■□□□ 1.33
CDKN3-209ENST00000556102 DOCK2Q92608 1830 aa23.35■■□□□ 1.33
CDKN3-209ENST00000556102 PDS5AQ29RF7 1337 aaKnown RBP23.34■■□□□ 1.33
CDKN3-209ENST00000556102 POTEFA5A3E0 1075 aa23.34■■□□□ 1.33
CDKN3-209ENST00000556102 SRGAP3O43295 1099 aa23.34■■□□□ 1.33
CDKN3-209ENST00000556102 GAKO14976 1311 aa23.33■■□□□ 1.33
CDKN3-209ENST00000556102 TIMM10P62072 90 aa23.33■■□□□ 1.33
CDKN3-209ENST00000556102 RASGRF1Q13972 1273 aa23.33■■□□□ 1.33
CDKN3-209ENST00000556102 NOL9Q5SY16 702 aaKnown RBP23.33■■□□□ 1.33
CDKN3-209ENST00000556102 AKAP2Q9Y2D5 859 aa23.33■■□□□ 1.33
CDKN3-209ENST00000556102 ZSWIM8A7E2V4 1837 aa23.32■■□□□ 1.32
CDKN3-209ENST00000556102 A0A1B0GUL7 405 aa23.32■■□□□ 1.32
CDKN3-209ENST00000556102 IPO8O15397 1037 aaKnown RBP23.32■■□□□ 1.32
CDKN3-209ENST00000556102 TFCP2Q12800 502 aa23.32■■□□□ 1.32
CDKN3-209ENST00000556102 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.32■■□□□ 1.32
CDKN3-209ENST00000556102 IDI2Q9BXS1 227 aa23.32■■□□□ 1.32
CDKN3-209ENST00000556102 KCNH4Q9UQ05 1017 aa23.32■■□□□ 1.32
CDKN3-209ENST00000556102 MVPQ14764 893 aaKnown RBP23.31■■□□□ 1.32
CDKN3-209ENST00000556102 DZIP1Q86YF9 867 aaKnown RBP23.31■■□□□ 1.32
CDKN3-209ENST00000556102 ZFPM1Q8IX07 1006 aa23.31■■□□□ 1.32
CDKN3-209ENST00000556102 SLF2Q8IX21 1173 aa23.31■■□□□ 1.32
CDKN3-209ENST00000556102 XAGE2Q96GT9 111 aa23.31■■□□□ 1.32
CDKN3-209ENST00000556102 ABCF2Q9UG63 623 aa23.31■■□□□ 1.32
CDKN3-209ENST00000556102 PTCH2Q9Y6C5 1203 aa23.31■■□□□ 1.32
CDKN3-209ENST00000556102 RFX7Q2KHR2 1363 aa23.3■■□□□ 1.32
CDKN3-209ENST00000556102 ATRNL1Q5VV63 1379 aa23.3■■□□□ 1.32
CDKN3-209ENST00000556102 ENTPD3O75355 529 aa23.3■■□□□ 1.32
CDKN3-209ENST00000556102 TRIM27P14373 513 aa23.3■■□□□ 1.32
CDKN3-209ENST00000556102 RGS3P49796 1198 aa23.3■■□□□ 1.32
CDKN3-209ENST00000556102 LACTBP83111 547 aaPredicted RBP23.3■■□□□ 1.32
CDKN3-209ENST00000556102 KIF22Q14807 665 aa23.3■■□□□ 1.32
CDKN3-209ENST00000556102 SPTY2D1Q68D10 685 aaPredicted RBP23.3■■□□□ 1.32
CDKN3-209ENST00000556102 ANKRD23Q86SG2 305 aa23.3■■□□□ 1.32
CDKN3-209ENST00000556102 SLC9C1Q4G0N8 1177 aa23.29■■□□□ 1.32
CDKN3-209ENST00000556102 ATF7IPQ6VMQ6 1270 aa23.29■■□□□ 1.32
CDKN3-209ENST00000556102 NBPF11Q86T75 865 aa23.29■■□□□ 1.32
CDKN3-209ENST00000556102 FAM163AQ96GL9 167 aaPredicted RBP23.29■■□□□ 1.32
CDKN3-209ENST00000556102 ZNF333Q96JL9 665 aa23.29■■□□□ 1.32
CDKN3-209ENST00000556102 MKI67P46013 3256 aaKnown RBP23.28■■□□□ 1.32
CDKN3-209ENST00000556102 GNAI2P04899 355 aa23.28■■□□□ 1.32
CDKN3-209ENST00000556102 GNRH1P01148 92 aa23.27■■□□□ 1.32
CDKN3-209ENST00000556102 C17orf99Q6UX52 265 aa23.27■■□□□ 1.32
CDKN3-209ENST00000556102 FRAT1Q92837 279 aaPredicted RBP23.27■■□□□ 1.32
CDKN3-209ENST00000556102 TMEM106CQ9BVX2 250 aa23.27■■□□□ 1.32
CDKN3-209ENST00000556102 ARHGAP39Q9C0H5 1083 aa23.27■■□□□ 1.32
CDKN3-209ENST00000556102 TNNQ9UQP3 1299 aa23.27■■□□□ 1.32
CDKN3-209ENST00000556102 MROH7-TTC4A0A0A0MT08 1334 aa23.27■■□□□ 1.32
CDKN3-209ENST00000556102 BRCA2P51587 3418 aa23.26■■□□□ 1.31
CDKN3-209ENST00000556102 PDHXO00330 501 aa23.26■■□□□ 1.31
CDKN3-209ENST00000556102 BCAR3O75815 825 aa23.26■■□□□ 1.31
CDKN3-209ENST00000556102 BTDP43251 543 aa23.26■■□□□ 1.31
CDKN3-209ENST00000556102 MOGSQ13724 837 aa23.26■■□□□ 1.31
CDKN3-209ENST00000556102 ERICH6Q7L0X2 663 aa23.26■■□□□ 1.31
CDKN3-209ENST00000556102 ZSCAN29Q8IWY8 852 aaPredicted RBP23.26■■□□□ 1.31
CDKN3-209ENST00000556102 NEUROD6Q96NK8 337 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms