RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 CTNNA3Q9UI47 895 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 RAB21Q9UL25 225 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 SYNPO2Q9UMS6 1093 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 USP16Q9Y5T5 823 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 SBF1O95248 1867 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 ACTN4O43707 911 aaKnown RBP4.06□□□□□ -1.76
SEC23A-207ENST00000554615 CWF19L2Q2TBE0 894 aaKnown RBP4.06□□□□□ -1.76
SEC23A-207ENST00000554615 REXO1L1PQ8IX06 675 aa4.06□□□□□ -1.76
SEC23A-207ENST00000554615 FBXO18Q8NFZ0 1043 aa4.06□□□□□ -1.76
SEC23A-207ENST00000554615 NEK1Q96PY6 1258 aa4.06□□□□□ -1.76
SEC23A-207ENST00000554615 PAGR1Q9BTK6 254 aa4.06□□□□□ -1.76
SEC23A-207ENST00000554615 EPB41L4AQ9HCS5 686 aaPredicted RBP4.06□□□□□ -1.76
SEC23A-207ENST00000554615 PAG1Q9NWQ8 432 aa4.06□□□□□ -1.76
SEC23A-207ENST00000554615 FBXO2Q9UK22 296 aaPredicted RBP4.06□□□□□ -1.76
SEC23A-207ENST00000554615 RANBP6O60518 1105 aaKnown RBP4.06□□□□□ -1.76
SEC23A-207ENST00000554615 MAP4K4O95819 1239 aaPredicted RBP4.06□□□□□ -1.76
SEC23A-207ENST00000554615 IFNAR1P17181 557 aa4.06□□□□□ -1.76
SEC23A-207ENST00000554615 TATP17735 454 aaPredicted RBP4.06□□□□□ -1.76
SEC23A-207ENST00000554615 BMP6P22004 513 aa4.06□□□□□ -1.76
SEC23A-207ENST00000554615 TM4SF1P30408 202 aa4.06□□□□□ -1.76
SEC23A-207ENST00000554615 TOB1P50616 345 aaPredicted RBP4.06□□□□□ -1.76
SEC23A-207ENST00000554615 NLRP12P59046 1061 aa4.06□□□□□ -1.76
SEC23A-207ENST00000554615 PKN1Q16512 942 aa4.06□□□□□ -1.76
SEC23A-207ENST00000554615 HYIQ5T013 277 aa4.06□□□□□ -1.76
SEC23A-207ENST00000554615 LRRC8AQ8IWT6 810 aa4.06□□□□□ -1.76
SEC23A-207ENST00000554615 CRYGNQ8WXF5 182 aa4.06□□□□□ -1.76
SEC23A-207ENST00000554615 OSBP2Q969R2 916 aa4.06□□□□□ -1.76
SEC23A-207ENST00000554615 AKT1S1Q96B36 256 aa4.06□□□□□ -1.76
SEC23A-207ENST00000554615 PHF20Q9BVI0 1012 aa4.06□□□□□ -1.76
SEC23A-207ENST00000554615 CWC25Q9NXE8 425 aaPredicted RBP4.06□□□□□ -1.76
SEC23A-207ENST00000554615 PAXBP1Q9Y5B6 917 aa4.06□□□□□ -1.76
SEC23A-207ENST00000554615 TULP2O00295 520 aa4.06□□□□□ -1.76
SEC23A-207ENST00000554615 EDIL3O43854 480 aa4.06□□□□□ -1.76
SEC23A-207ENST00000554615 PRPF40AO75400 957 aaKnown RBP4.06□□□□□ -1.76
SEC23A-207ENST00000554615 FKBP1AP62942 108 aaKnown RBP4.06□□□□□ -1.76
SEC23A-207ENST00000554615 NOLC1Q14978 699 aaKnown RBP eCLIP4.06□□□□□ -1.76
SEC23A-207ENST00000554615 NUTM1Q86Y26 1132 aa4.06□□□□□ -1.76
SEC23A-207ENST00000554615 FAM163AQ96GL9 167 aaPredicted RBP4.06□□□□□ -1.76
SEC23A-207ENST00000554615 STRBPQ96SI9 672 aaKnown RBP4.06□□□□□ -1.76
SEC23A-207ENST00000554615 AATFQ9NY61 560 aaKnown RBP eCLIP4.06□□□□□ -1.76
SEC23A-207ENST00000554615 DDX41Q9UJV9 622 aaKnown RBP4.06□□□□□ -1.76
SEC23A-207ENST00000554615 DDX49Q9Y6V7 483 aaKnown RBP4.06□□□□□ -1.76
SEC23A-207ENST00000554615 SPATA31A6Q5VVP1 1343 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 A0A1B0GTH6 734 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 SYCE3A1L190 88 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 PPP1R37O75864 691 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 CASTP20810 708 aaKnown RBP4.05□□□□□ -1.76
SEC23A-207ENST00000554615 MARSP56192 900 aaKnown RBP4.05□□□□□ -1.76
SEC23A-207ENST00000554615 NCBP1Q09161 790 aaKnown RBP4.05□□□□□ -1.76
SEC23A-207ENST00000554615 FIGNQ5HY92 759 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 RNF20Q5VTR2 975 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 CAVIN1Q6NZI2 390 aaKnown RBP4.05□□□□□ -1.76
SEC23A-207ENST00000554615 FBXO33Q7Z6M2 555 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 STK11IPQ8N1F8 1099 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 MSANTD4Q8NCY6 345 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 MAF1Q9H063 256 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 STAG3Q9UJ98 1225 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 KIF28PB7ZC32 967 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 MAP2K7O14733 419 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 SURF6O75683 361 aaKnown RBP4.05□□□□□ -1.76
SEC23A-207ENST00000554615 MYL1P05976 194 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 SNHG28P0DPA3 235 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 MCAMP43121 646 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 CTSWP56202 376 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 TUBB2AQ13885 445 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 NR1I3Q14994 352 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 NFIL3Q16649 462 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 CCDC144BQ3MJ40 725 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 HSP90AB3PQ58FF7 597 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 ZSCAN29Q8IWY8 852 aaPredicted RBP4.05□□□□□ -1.76
SEC23A-207ENST00000554615 CCDC144CPQ8IYA2 1237 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 TUBB2BQ9BVA1 445 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 PYCARDQ9ULZ3 195 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 AKAP2Q9Y2D5 859 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 FLT1P17948 1338 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 SENP3-EIF4A1A0A087X0R7 540 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 A0A0U1RQG5 324 aaPredicted RBP4.05□□□□□ -1.76
SEC23A-207ENST00000554615 BTNL10A8MVZ5 291 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 IL2RBP14784 551 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 PTPREP23469 700 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 MMP14P50281 582 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 KRT85P78386 507 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 DNM1Q05193 864 aaKnown RBP4.05□□□□□ -1.76
SEC23A-207ENST00000554615 KIAA2012Q0VF49 1180 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 TTF1Q15361 905 aaPredicted RBP4.05□□□□□ -1.76
SEC23A-207ENST00000554615 STX1AQ16623 288 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 MEA1Q16626 185 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 COPS6Q7L5N1 327 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 GTPBP4Q9BZE4 634 aaKnown RBP4.05□□□□□ -1.76
SEC23A-207ENST00000554615 DIAPH3Q9NSV4 1193 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 CFAP45Q9UL16 551 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 CNTNAP1P78357 1384 aa4.05□□□□□ -1.76
SEC23A-207ENST00000554615 SRRM3A6NNA2 597 aaPredicted RBP4.04□□□□□ -1.76
SEC23A-207ENST00000554615 RBAK-RBAKDNI3L0D1 243 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 KIF2AO00139 706 aaPredicted RBP4.04□□□□□ -1.76
SEC23A-207ENST00000554615 CUTAO60888 179 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 NR1I2O75469 434 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 ADCY5O95622 1261 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 GNAT2P19087 354 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 PPP4CP60510 307 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms