RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 MAST2Q6P0Q8 1798 aa8.21□□□□□ -1.1
SLIRP-203ENST00000554074 SPDYE5A6NIY4 337 aa8.21□□□□□ -1.1
SLIRP-203ENST00000554074 GTF2A2P52657 109 aa8.21□□□□□ -1.1
SLIRP-203ENST00000554074 VGLL4Q14135 290 aa8.21□□□□□ -1.1
SLIRP-203ENST00000554074 DCAF15Q66K64 600 aa8.21□□□□□ -1.1
SLIRP-203ENST00000554074 ATF7IPQ6VMQ6 1270 aa8.21□□□□□ -1.1
SLIRP-203ENST00000554074 CDAN1Q8IWY9 1227 aa8.21□□□□□ -1.1
SLIRP-203ENST00000554074 OPTNQ96CV9 577 aa8.21□□□□□ -1.1
SLIRP-203ENST00000554074 MS4A4AQ96JQ5 239 aa8.21□□□□□ -1.1
SLIRP-203ENST00000554074 SIL1Q9H173 461 aa8.21□□□□□ -1.1
SLIRP-203ENST00000554074 R3HDMLQ9H3Y0 253 aa8.21□□□□□ -1.1
SLIRP-203ENST00000554074 ELP3Q9H9T3 547 aa8.21□□□□□ -1.1
SLIRP-203ENST00000554074 ZCCHC17Q9NP64 241 aaKnown RBP8.21□□□□□ -1.1
SLIRP-203ENST00000554074 CSADQ9Y600 493 aa8.21□□□□□ -1.1
SLIRP-203ENST00000554074 HTTP42858 3142 aa8.21□□□□□ -1.1
SLIRP-203ENST00000554074 ATAD5Q96QE3 1844 aa8.21□□□□□ -1.1
SLIRP-203ENST00000554074 LDHBP07195 334 aaKnown RBP8.2□□□□□ -1.1
SLIRP-203ENST00000554074 TRIM27P14373 513 aa8.2□□□□□ -1.1
SLIRP-203ENST00000554074 CACNB3P54284 484 aa8.2□□□□□ -1.1
SLIRP-203ENST00000554074 CRHR2Q13324 411 aa8.2□□□□□ -1.1
SLIRP-203ENST00000554074 CCDC102BQ68D86 513 aa8.2□□□□□ -1.1
SLIRP-203ENST00000554074 ERO1BQ86YB8 467 aa8.2□□□□□ -1.1
SLIRP-203ENST00000554074 FAM151AQ8WW52 585 aa8.2□□□□□ -1.1
SLIRP-203ENST00000554074 ERO1AQ96HE7 468 aa8.2□□□□□ -1.1
SLIRP-203ENST00000554074 PTPN18Q99952 460 aa8.2□□□□□ -1.1
SLIRP-203ENST00000554074 PA2G4Q9UQ80 394 aaKnown RBP8.2□□□□□ -1.1
SLIRP-203ENST00000554074 AKAP2Q9Y2D5 859 aa8.2□□□□□ -1.1
SLIRP-203ENST00000554074 DAGLAQ9Y4D2 1042 aa8.2□□□□□ -1.1
SLIRP-203ENST00000554074 SRGAP3O43295 1099 aa8.19□□□□□ -1.1
SLIRP-203ENST00000554074 PRDX5P30044 214 aa8.19□□□□□ -1.1
SLIRP-203ENST00000554074 PHKA1P46020 1223 aa8.19□□□□□ -1.1
SLIRP-203ENST00000554074 MVPQ14764 893 aaKnown RBP8.19□□□□□ -1.1
SLIRP-203ENST00000554074 SPTY2D1Q68D10 685 aaPredicted RBP8.19□□□□□ -1.1
SLIRP-203ENST00000554074 CDC42EP5Q6NZY7 148 aa8.19□□□□□ -1.1
SLIRP-203ENST00000554074 SLF2Q8IX21 1173 aa8.19□□□□□ -1.1
SLIRP-203ENST00000554074 MIER1Q8N108 512 aa8.19□□□□□ -1.1
SLIRP-203ENST00000554074 BRI3BPQ8WY22 251 aa8.19□□□□□ -1.1
SLIRP-203ENST00000554074 FAM163AQ96GL9 167 aaPredicted RBP8.19□□□□□ -1.1
SLIRP-203ENST00000554074 WRNIP1Q96S55 665 aa8.19□□□□□ -1.1
SLIRP-203ENST00000554074 ZNF341Q9BYN7 854 aa8.19□□□□□ -1.1
SLIRP-203ENST00000554074 ZNF112Q9UJU3 913 aa8.19□□□□□ -1.1
SLIRP-203ENST00000554074 SNCAIPQ9Y6H5 919 aa8.19□□□□□ -1.1
SLIRP-203ENST00000554074 GAKO14976 1311 aa8.19□□□□□ -1.1
SLIRP-203ENST00000554074 RFX7Q2KHR2 1363 aa8.19□□□□□ -1.1
SLIRP-203ENST00000554074 ZSWIM8A7E2V4 1837 aa8.18□□□□□ -1.1
SLIRP-203ENST00000554074 CCL15-CCL14A0A0B4J2E2 113 aa8.18□□□□□ -1.1
SLIRP-203ENST00000554074 A0A1B0GUL7 405 aa8.18□□□□□ -1.1
SLIRP-203ENST00000554074 ENTPD3O75355 529 aa8.18□□□□□ -1.1
SLIRP-203ENST00000554074 GNAI2P04899 355 aa8.18□□□□□ -1.1
SLIRP-203ENST00000554074 CETPP11597 493 aa8.18□□□□□ -1.1
SLIRP-203ENST00000554074 ADORA1P30542 326 aa8.18□□□□□ -1.1
SLIRP-203ENST00000554074 SOX10P56693 466 aa8.18□□□□□ -1.1
SLIRP-203ENST00000554074 SP3Q02447 781 aa8.18□□□□□ -1.1
SLIRP-203ENST00000554074 PPATQ06203 517 aa8.18□□□□□ -1.1
SLIRP-203ENST00000554074 PPIL2Q13356 520 aa8.18□□□□□ -1.1
SLIRP-203ENST00000554074 SNAPC2Q13487 334 aa8.18□□□□□ -1.1
SLIRP-203ENST00000554074 RASGRF1Q13972 1273 aa8.18□□□□□ -1.1
SLIRP-203ENST00000554074 ARHGEF6Q15052 776 aa8.18□□□□□ -1.1
SLIRP-203ENST00000554074 DIXDC1Q155Q3 683 aa8.18□□□□□ -1.1
SLIRP-203ENST00000554074 CCL15Q16663 113 aa8.18□□□□□ -1.1
SLIRP-203ENST00000554074 ZKSCAN2Q63HK3 967 aa8.18□□□□□ -1.1
SLIRP-203ENST00000554074 OTOP1Q7RTM1 612 aa8.18□□□□□ -1.1
SLIRP-203ENST00000554074 OTUD5Q96G74 571 aa8.18□□□□□ -1.1
SLIRP-203ENST00000554074 XAGE2Q96GT9 111 aa8.18□□□□□ -1.1
SLIRP-203ENST00000554074 IDI2Q9BXS1 227 aa8.18□□□□□ -1.1
SLIRP-203ENST00000554074 ZFYVE28Q9HCC9 887 aa8.18□□□□□ -1.1
SLIRP-203ENST00000554074 TRIM17Q9Y577 477 aa8.18□□□□□ -1.1
SLIRP-203ENST00000554074 DOCK3Q8IZD9 2030 aa8.18□□□□□ -1.1
SLIRP-203ENST00000554074 IRF6O14896 467 aa8.17□□□□□ -1.1
SLIRP-203ENST00000554074 IGSF3O75054 1194 aa8.17□□□□□ -1.1
SLIRP-203ENST00000554074 WDHD1O75717 1129 aaPredicted RBP8.17□□□□□ -1.1
SLIRP-203ENST00000554074 BCAR3O75815 825 aa8.17□□□□□ -1.1
SLIRP-203ENST00000554074 MAP4K4O95819 1239 aaPredicted RBP8.17□□□□□ -1.1
SLIRP-203ENST00000554074 TIMM10P62072 90 aa8.17□□□□□ -1.1
SLIRP-203ENST00000554074 C1QBPQ07021 282 aaKnown RBP8.17□□□□□ -1.1
SLIRP-203ENST00000554074 TFCP2Q12800 502 aa8.17□□□□□ -1.1
SLIRP-203ENST00000554074 NFIAQ12857 509 aa8.17□□□□□ -1.1
SLIRP-203ENST00000554074 TAF1CQ15572 869 aaPredicted RBP8.17□□□□□ -1.1
SLIRP-203ENST00000554074 NOL9Q5SY16 702 aaKnown RBP8.17□□□□□ -1.1
SLIRP-203ENST00000554074 DZIP1Q86YF9 867 aaKnown RBP8.17□□□□□ -1.1
SLIRP-203ENST00000554074 ZKSCAN4Q969J2 545 aaPredicted RBP8.17□□□□□ -1.1
SLIRP-203ENST00000554074 USP40Q9NVE5 1235 aa8.17□□□□□ -1.1
SLIRP-203ENST00000554074 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.17□□□□□ -1.1
SLIRP-203ENST00000554074 FAM198AQ9UFP1 575 aa8.17□□□□□ -1.1
SLIRP-203ENST00000554074 KCNH4Q9UQ05 1017 aa8.17□□□□□ -1.1
SLIRP-203ENST00000554074 PTPN22Q9Y2R2 807 aa8.17□□□□□ -1.1
SLIRP-203ENST00000554074 ATRNL1Q5VV63 1379 aa8.17□□□□□ -1.1
SLIRP-203ENST00000554074 COL2A1P02458 1487 aaPredicted RBP8.17□□□□□ -1.1
SLIRP-203ENST00000554074 CENPFP49454 3210 aa8.17□□□□□ -1.1
SLIRP-203ENST00000554074 MYH1P12882 1939 aa8.17□□□□□ -1.1
SLIRP-203ENST00000554074 LOC285556D6RIA3 1793 aa8.16□□□□□ -1.1
SLIRP-203ENST00000554074 SIPA1L1O43166 1804 aa8.16□□□□□ -1.1
SLIRP-203ENST00000554074 TLR2O60603 784 aa8.16□□□□□ -1.1
SLIRP-203ENST00000554074 ARID4AP29374 1257 aaPredicted RBP8.16□□□□□ -1.1
SLIRP-203ENST00000554074 INPP5BP32019 993 aa8.16□□□□□ -1.1
SLIRP-203ENST00000554074 MAP3K10Q02779 954 aa8.16□□□□□ -1.1
SLIRP-203ENST00000554074 TCP10Q12799 353 aa8.16□□□□□ -1.1
SLIRP-203ENST00000554074 G3BP1Q13283 466 aaKnown RBP eCLIP8.16□□□□□ -1.1
SLIRP-203ENST00000554074 POLA2Q14181 598 aa8.16□□□□□ -1.1
SLIRP-203ENST00000554074 ERICH6Q7L0X2 663 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms