RNA–Protein interactions for RNA: ENST00000552561.5

TMEM106C-220, Transcript of transmembrane protein 106C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106C, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-220ENST00000552561 FAM83AQ86UY5 434 aa5.61□□□□□ -1.51
TMEM106C-220ENST00000552561 KIAA0825Q8IV33 1275 aa5.61□□□□□ -1.51
TMEM106C-220ENST00000552561 ANKRD13AQ8IZ07 590 aa5.61□□□□□ -1.51
TMEM106C-220ENST00000552561 TRMT2AQ8IZ69 625 aaKnown RBP5.61□□□□□ -1.51
TMEM106C-220ENST00000552561 DPF3Q92784 378 aa5.61□□□□□ -1.51
TMEM106C-220ENST00000552561 MS4A4AQ96JQ5 239 aa5.61□□□□□ -1.51
TMEM106C-220ENST00000552561 PRMT6Q96LA8 375 aaPredicted RBP5.61□□□□□ -1.51
TMEM106C-220ENST00000552561 MXD3Q9BW11 206 aa5.61□□□□□ -1.51
TMEM106C-220ENST00000552561 SRCIN1Q9C0H9 1055 aa5.61□□□□□ -1.51
TMEM106C-220ENST00000552561 MRS2Q9HD23 443 aa5.61□□□□□ -1.51
TMEM106C-220ENST00000552561 RBM27Q9P2N5 1060 aaKnown RBP5.61□□□□□ -1.51
TMEM106C-220ENST00000552561 BOLA1Q9Y3E2 137 aa5.61□□□□□ -1.51
TMEM106C-220ENST00000552561 TRIM17Q9Y577 477 aa5.61□□□□□ -1.51
TMEM106C-220ENST00000552561 OTOFQ9HC10 1997 aa5.6□□□□□ -1.51
TMEM106C-220ENST00000552561 CENPFP49454 3210 aa5.6□□□□□ -1.51
TMEM106C-220ENST00000552561 F6X3S4 739 aa5.6□□□□□ -1.51
TMEM106C-220ENST00000552561 ANP32CO43423 234 aa5.6□□□□□ -1.51
TMEM106C-220ENST00000552561 MYO1BO43795 1136 aa5.6□□□□□ -1.51
TMEM106C-220ENST00000552561 USP2O75604 605 aaPredicted RBP5.6□□□□□ -1.51
TMEM106C-220ENST00000552561 PDE8BO95263 885 aa5.6□□□□□ -1.51
TMEM106C-220ENST00000552561 ALDH1L2Q3SY69 923 aa5.6□□□□□ -1.51
TMEM106C-220ENST00000552561 CFAP100Q494V2 611 aa5.6□□□□□ -1.51
TMEM106C-220ENST00000552561 DEFB123Q8N688 67 aa5.6□□□□□ -1.51
TMEM106C-220ENST00000552561 ANKRD44Q8N8A2 993 aa5.6□□□□□ -1.51
TMEM106C-220ENST00000552561 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.6□□□□□ -1.51
TMEM106C-220ENST00000552561 TBC1D22AQ8WUA7 517 aa5.6□□□□□ -1.51
TMEM106C-220ENST00000552561 ARMC5Q96C12 935 aa5.6□□□□□ -1.51
TMEM106C-220ENST00000552561 ERO1AQ96HE7 468 aa5.6□□□□□ -1.51
TMEM106C-220ENST00000552561 SUCLG2Q96I99 432 aa5.6□□□□□ -1.51
TMEM106C-220ENST00000552561 WNK4Q96J92 1243 aa5.6□□□□□ -1.51
TMEM106C-220ENST00000552561 NCOR1O75376 2440 aa5.6□□□□□ -1.51
TMEM106C-220ENST00000552561 AOX1Q06278 1338 aa5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 PDS5AQ29RF7 1337 aaKnown RBP5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 SALL1Q9NSC2 1324 aa5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 SPDYE5A6NIY4 337 aa5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 E9PSI1 815 aa5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 SNAP23O00161 211 aa5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 IGF2BP3O00425 579 aaKnown RBP eCLIP5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 TAF5LO75529 589 aa5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 TBC1D8O95759 1140 aa5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 NBPF7P0C2Y1 421 aaPredicted RBP5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 HIBADHP31937 336 aaKnown RBP5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 KCNJ4P48050 445 aa5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 IREB2P48200 963 aaKnown RBP5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 RFX5P48382 616 aaPredicted RBP5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 RASA3Q14644 834 aa5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 MFSD14BQ5SR56 506 aa5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 PRAMEF18Q5VWM3 479 aa5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 HHIPL2Q6UWX4 724 aa5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 DZIP1LQ8IYY4 767 aaKnown RBP5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 MRPL50Q8N5N7 158 aaKnown RBP5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 SLC10A4Q96EP9 437 aa5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 YTHDC1Q96MU7 727 aaKnown RBP5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 ZDHHC15Q96MV8 337 aa5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 USP44Q9H0E7 712 aa5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 C9orf78Q9NZ63 289 aaPredicted RBP5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 ZNF70Q9UC06 446 aaPredicted RBP5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 ANGEL1Q9UNK9 670 aaKnown RBP5.59□□□□□ -1.51
TMEM106C-220ENST00000552561 RFX7Q2KHR2 1363 aa5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 MAST3O60307 1309 aa5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 TMEM265A0A087WTH1 108 aa5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 SEMA3EO15041 775 aa5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 IGSF3O75054 1194 aa5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 CIAO1O76071 339 aa5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 GNRH1P01148 92 aa5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 HOXB3P14651 431 aaPredicted RBP5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 EN2P19622 333 aaPredicted RBP5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 GJA5P36382 358 aa5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 MAP3K10Q02779 954 aa5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 SLFN5Q08AF3 891 aa5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 SLC9C1Q4G0N8 1177 aa5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 NBPF12Q5TAG4 269 aaPredicted RBP5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 OTUD7BQ6GQQ9 843 aa5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 APOBEC3HQ6NTF7 200 aaKnown RBP5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 OTOP1Q7RTM1 612 aa5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 HOOK2Q96ED9 719 aa5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 CLMNQ96JQ2 1002 aa5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 PTPN18Q99952 460 aa5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 PUS3Q9BZE2 481 aaKnown RBP5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 R3HDMLQ9H3Y0 253 aa5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 BICC1Q9H694 974 aaKnown RBP5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 ZNF112Q9UJU3 913 aa5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 PCDHAC2Q9Y5I4 1007 aa5.58□□□□□ -1.52
TMEM106C-220ENST00000552561 ATRNL1Q5VV63 1379 aa5.57□□□□□ -1.52
TMEM106C-220ENST00000552561 CCER2I3L3R5 266 aa5.57□□□□□ -1.52
TMEM106C-220ENST00000552561 CAPN2P17655 700 aa5.57□□□□□ -1.52
TMEM106C-220ENST00000552561 CRKP46108 304 aa5.57□□□□□ -1.52
TMEM106C-220ENST00000552561 GYG1P46976 350 aa5.57□□□□□ -1.52
TMEM106C-220ENST00000552561 TNNI2P48788 182 aa5.57□□□□□ -1.52
TMEM106C-220ENST00000552561 PRMT2P55345 433 aa5.57□□□□□ -1.52
TMEM106C-220ENST00000552561 MTX1Q13505 466 aa5.57□□□□□ -1.52
TMEM106C-220ENST00000552561 PUM3Q15397 648 aaKnown RBP5.57□□□□□ -1.52
TMEM106C-220ENST00000552561 CAVIN4Q5BKX8 364 aa5.57□□□□□ -1.52
TMEM106C-220ENST00000552561 ERO1BQ86YB8 467 aa5.57□□□□□ -1.52
TMEM106C-220ENST00000552561 HELBQ8NG08 1087 aaPredicted RBP5.57□□□□□ -1.52
TMEM106C-220ENST00000552561 NKX2-3Q8TAU0 364 aa5.57□□□□□ -1.52
TMEM106C-220ENST00000552561 BRI3BPQ8WY22 251 aa5.57□□□□□ -1.52
TMEM106C-220ENST00000552561 SSH1Q8WYL5 1049 aa5.57□□□□□ -1.52
TMEM106C-220ENST00000552561 LPIN2Q92539 896 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms