RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 FBXO3Q9UK99 471 aa16.62■□□□□ 0.25
NUP188-211ENST00000550219 HDAC5Q9UQL6 1122 aa16.62■□□□□ 0.25
NUP188-211ENST00000550219 DAGLAQ9Y4D2 1042 aa16.62■□□□□ 0.25
NUP188-211ENST00000550219 RPAP1Q9BWH6 1393 aaPredicted RBP16.62■□□□□ 0.25
NUP188-211ENST00000550219 LDHBP07195 334 aaKnown RBP16.61■□□□□ 0.25
NUP188-211ENST00000550219 RLBP1P12271 317 aa16.61■□□□□ 0.25
NUP188-211ENST00000550219 GTF2A2P52657 109 aa16.61■□□□□ 0.25
NUP188-211ENST00000550219 TCP10Q12799 353 aa16.61■□□□□ 0.25
NUP188-211ENST00000550219 TAF1CQ15572 869 aaPredicted RBP16.61■□□□□ 0.25
NUP188-211ENST00000550219 HOOK2Q96ED9 719 aa16.61■□□□□ 0.25
NUP188-211ENST00000550219 ERO1AQ96HE7 468 aa16.61■□□□□ 0.25
NUP188-211ENST00000550219 MS4A4AQ96JQ5 239 aa16.61■□□□□ 0.25
NUP188-211ENST00000550219 SNCAIPQ9Y6H5 919 aa16.61■□□□□ 0.25
NUP188-211ENST00000550219 TESPA1A2RU30 521 aaPredicted RBP16.6■□□□□ 0.25
NUP188-211ENST00000550219 SPDYE5A6NIY4 337 aa16.6■□□□□ 0.25
NUP188-211ENST00000550219 DCAF15Q66K64 600 aa16.6■□□□□ 0.25
NUP188-211ENST00000550219 MIGA2Q7L4E1 593 aa16.6■□□□□ 0.25
NUP188-211ENST00000550219 ZKSCAN4Q969J2 545 aaPredicted RBP16.6■□□□□ 0.25
NUP188-211ENST00000550219 DENND2AQ9ULE3 1009 aa16.6■□□□□ 0.25
NUP188-211ENST00000550219 SRGAP3O43295 1099 aa16.59■□□□□ 0.25
NUP188-211ENST00000550219 GNAI3P08754 354 aa16.59■□□□□ 0.25
NUP188-211ENST00000550219 NFIAQ12857 509 aa16.59■□□□□ 0.25
NUP188-211ENST00000550219 C20orf194Q5TEA3 1177 aa16.59■□□□□ 0.25
NUP188-211ENST00000550219 FKBP1CQ5VVH2 108 aa16.59■□□□□ 0.25
NUP188-211ENST00000550219 INTS3Q68E01 1043 aaKnown RBP16.59■□□□□ 0.25
NUP188-211ENST00000550219 CDC42EP5Q6NZY7 148 aa16.59■□□□□ 0.25
NUP188-211ENST00000550219 FAM43AQ8N2R8 423 aa16.59■□□□□ 0.25
NUP188-211ENST00000550219 MRIQ9BWK5 157 aa16.59■□□□□ 0.25
NUP188-211ENST00000550219 ZNF341Q9BYN7 854 aa16.59■□□□□ 0.25
NUP188-211ENST00000550219 COPRSQ9NQ92 184 aa16.59■□□□□ 0.25
NUP188-211ENST00000550219 SP3Q02447 781 aa16.58■□□□□ 0.24
NUP188-211ENST00000550219 CCDC102BQ68D86 513 aa16.58■□□□□ 0.24
NUP188-211ENST00000550219 ERO1BQ86YB8 467 aa16.58■□□□□ 0.24
NUP188-211ENST00000550219 PANK1Q8TE04 598 aa16.58■□□□□ 0.24
NUP188-211ENST00000550219 CLUAP1Q96AJ1 413 aa16.58■□□□□ 0.24
NUP188-211ENST00000550219 ZFYVE28Q9HCC9 887 aa16.58■□□□□ 0.24
NUP188-211ENST00000550219 SALL1Q9NSC2 1324 aa16.57■□□□□ 0.24
NUP188-211ENST00000550219 A0A1B0GUL7 405 aa16.57■□□□□ 0.24
NUP188-211ENST00000550219 SEMA3EO15041 775 aa16.57■□□□□ 0.24
NUP188-211ENST00000550219 INPP5BP32019 993 aa16.57■□□□□ 0.24
NUP188-211ENST00000550219 TFCP2Q12800 502 aa16.57■□□□□ 0.24
NUP188-211ENST00000550219 RASGRF1Q13972 1273 aa16.57■□□□□ 0.24
NUP188-211ENST00000550219 DZIP1Q86YF9 867 aaKnown RBP16.57■□□□□ 0.24
NUP188-211ENST00000550219 FTSJ3Q8IY81 847 aaKnown RBP16.57■□□□□ 0.24
NUP188-211ENST00000550219 TMEM57Q8N5G2 664 aa16.57■□□□□ 0.24
NUP188-211ENST00000550219 FAM151AQ8WW52 585 aa16.57■□□□□ 0.24
NUP188-211ENST00000550219 EFCC1Q9HA90 598 aa16.57■□□□□ 0.24
NUP188-211ENST00000550219 USP40Q9NVE5 1235 aa16.57■□□□□ 0.24
NUP188-211ENST00000550219 ABCF2Q9UG63 623 aa16.57■□□□□ 0.24
NUP188-211ENST00000550219 IRF6O14896 467 aa16.56■□□□□ 0.24
NUP188-211ENST00000550219 CETPP11597 493 aa16.56■□□□□ 0.24
NUP188-211ENST00000550219 TIMM10P62072 90 aa16.56■□□□□ 0.24
NUP188-211ENST00000550219 PPIL2Q13356 520 aa16.56■□□□□ 0.24
NUP188-211ENST00000550219 SNAPC2Q13487 334 aa16.56■□□□□ 0.24
NUP188-211ENST00000550219 ZGPATQ8N5A5 531 aaKnown RBP16.56■□□□□ 0.24
NUP188-211ENST00000550219 FAM198AQ9UFP1 575 aa16.56■□□□□ 0.24
NUP188-211ENST00000550219 DOCK2Q92608 1830 aa16.56■□□□□ 0.24
NUP188-211ENST00000550219 WDHD1O75717 1129 aaPredicted RBP16.55■□□□□ 0.24
NUP188-211ENST00000550219 ECM2O94769 699 aaPredicted RBP16.55■□□□□ 0.24
NUP188-211ENST00000550219 CAP1Q01518 475 aa16.55■□□□□ 0.24
NUP188-211ENST00000550219 XAGE2Q96GT9 111 aa16.55■□□□□ 0.24
NUP188-211ENST00000550219 PTPN22Q9Y2R2 807 aa16.55■□□□□ 0.24
NUP188-211ENST00000550219 ZSWIM8A7E2V4 1837 aa16.54■□□□□ 0.24
NUP188-211ENST00000550219 BTBD19C9JJ37 291 aa16.54■□□□□ 0.24
NUP188-211ENST00000550219 MVPQ14764 893 aaKnown RBP16.54■□□□□ 0.24
NUP188-211ENST00000550219 NEUROD6Q96NK8 337 aa16.54■□□□□ 0.24
NUP188-211ENST00000550219 AKAP2Q9Y2D5 859 aa16.54■□□□□ 0.24
NUP188-211ENST00000550219 AK9Q5TCS8 1911 aa16.54■□□□□ 0.24
NUP188-211ENST00000550219 MYH2Q9UKX2 1941 aa16.53■□□□□ 0.24
NUP188-211ENST00000550219 GNAI2P04899 355 aa16.53■□□□□ 0.24
NUP188-211ENST00000550219 RGS3P49796 1198 aa16.53■□□□□ 0.24
NUP188-211ENST00000550219 PICALMQ13492 652 aa16.53■□□□□ 0.24
NUP188-211ENST00000550219 MTX1Q13505 466 aa16.53■□□□□ 0.24
NUP188-211ENST00000550219 GORABQ5T7V8 394 aa16.53■□□□□ 0.24
NUP188-211ENST00000550219 ZSCAN29Q8IWY8 852 aaPredicted RBP16.53■□□□□ 0.24
NUP188-211ENST00000550219 ZFPM1Q8IX07 1006 aa16.53■□□□□ 0.24
NUP188-211ENST00000550219 COG6Q9Y2V7 657 aa16.53■□□□□ 0.24
NUP188-211ENST00000550219 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.53■□□□□ 0.24
NUP188-211ENST00000550219 GAKO14976 1311 aa16.52■□□□□ 0.24
NUP188-211ENST00000550219 POTEFA5A3E0 1075 aa16.52■□□□□ 0.24
NUP188-211ENST00000550219 BTDP43251 543 aa16.52■□□□□ 0.24
NUP188-211ENST00000550219 PPATQ06203 517 aa16.52■□□□□ 0.24
NUP188-211ENST00000550219 PTCH2Q9Y6C5 1203 aa16.52■□□□□ 0.24
NUP188-211ENST00000550219 RFX7Q2KHR2 1363 aa16.51■□□□□ 0.23
NUP188-211ENST00000550219 MROH7-TTC4A0A0A0MT08 1334 aa16.51■□□□□ 0.23
NUP188-211ENST00000550219 PNMA6EA0A0J9YXQ4 647 aa16.51■□□□□ 0.23
NUP188-211ENST00000550219 ZBTB7BO15156 539 aaPredicted RBP16.51■□□□□ 0.23
NUP188-211ENST00000550219 SPTY2D1Q68D10 685 aaPredicted RBP16.51■□□□□ 0.23
NUP188-211ENST00000550219 PI16Q6UXB8 463 aa16.51■□□□□ 0.23
NUP188-211ENST00000550219 ERICH6Q7L0X2 663 aa16.51■□□□□ 0.23
NUP188-211ENST00000550219 ITPRIPQ8IWB1 547 aa16.51■□□□□ 0.23
NUP188-211ENST00000550219 SLF2Q8IX21 1173 aa16.51■□□□□ 0.23
NUP188-211ENST00000550219 ARHGAP39Q9C0H5 1083 aa16.51■□□□□ 0.23
NUP188-211ENST00000550219 DDX19BQ9UMR2 479 aa16.51■□□□□ 0.23
NUP188-211ENST00000550219 TNRC18O15417 2968 aaPredicted RBP16.51■□□□□ 0.23
NUP188-211ENST00000550219 PDS5AQ29RF7 1337 aaKnown RBP16.5■□□□□ 0.23
NUP188-211ENST00000550219 TLR2O60603 784 aa16.5■□□□□ 0.23
NUP188-211ENST00000550219 MYCP01106 439 aaPredicted RBP16.5■□□□□ 0.23
NUP188-211ENST00000550219 G3BP1Q13283 466 aaKnown RBP eCLIP16.5■□□□□ 0.23
NUP188-211ENST00000550219 KIF22Q14807 665 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms