RNA–Protein interactions for RNA: ENST00000541478.5

OTUB1-210, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-210ENST00000541478 DDR1Q08345 913 aa23.66■■□□□ 1.38
OTUB1-210ENST00000541478 C15orf52Q6ZUT6 534 aaKnown RBP23.66■■□□□ 1.38
OTUB1-210ENST00000541478 FLAD1Q8NFF5 587 aa23.66■■□□□ 1.38
OTUB1-210ENST00000541478 NSUN4Q96CB9 384 aaKnown RBP23.66■■□□□ 1.38
OTUB1-210ENST00000541478 GRPEL1Q9HAV7 217 aa23.66■■□□□ 1.38
OTUB1-210ENST00000541478 NCOA5Q9HCD5 579 aaKnown RBP23.66■■□□□ 1.38
OTUB1-210ENST00000541478 CHD4Q14839 1912 aa23.66■■□□□ 1.38
OTUB1-210ENST00000541478 MAST2Q6P0Q8 1798 aa23.66■■□□□ 1.38
OTUB1-210ENST00000541478 SH2B2O14492 632 aaPredicted RBP23.66■■□□□ 1.38
OTUB1-210ENST00000541478 BBOX1O75936 387 aa23.66■■□□□ 1.38
OTUB1-210ENST00000541478 CHAF1AQ13111 956 aaPredicted RBP23.66■■□□□ 1.38
OTUB1-210ENST00000541478 CYB5R4Q7L1T6 521 aa23.66■■□□□ 1.38
OTUB1-210ENST00000541478 ZNF804AQ7Z570 1209 aa23.66■■□□□ 1.38
OTUB1-210ENST00000541478 FERMT3Q86UX7 667 aa23.66■■□□□ 1.38
OTUB1-210ENST00000541478 GPHNQ9NQX3 736 aaPredicted RBP23.66■■□□□ 1.38
OTUB1-210ENST00000541478 NLGN1Q8N2Q7 840 aa23.65■■□□□ 1.38
OTUB1-210ENST00000541478 BRPF3Q9ULD4 1205 aa23.65■■□□□ 1.38
OTUB1-210ENST00000541478 CPLX1O14810 134 aa23.64■■□□□ 1.38
OTUB1-210ENST00000541478 ATP2B4P23634 1241 aa23.64■■□□□ 1.38
OTUB1-210ENST00000541478 HOXA10P31260 410 aaPredicted RBP23.64■■□□□ 1.38
OTUB1-210ENST00000541478 CTDSPL2Q05D32 466 aa23.64■■□□□ 1.38
OTUB1-210ENST00000541478 GIMAP6Q6P9H5 292 aa23.64■■□□□ 1.38
OTUB1-210ENST00000541478 TMC4Q7Z404 712 aa23.64■■□□□ 1.38
OTUB1-210ENST00000541478 WDR66Q8TBY9 1149 aa23.64■■□□□ 1.38
OTUB1-210ENST00000541478 MTA3Q9BTC8 594 aa23.64■■□□□ 1.38
OTUB1-210ENST00000541478 BRIP1Q9BX63 1249 aa23.64■■□□□ 1.38
OTUB1-210ENST00000541478 TMEM63CQ9P1W3 806 aa23.64■■□□□ 1.38
OTUB1-210ENST00000541478 MECOMQ03112 1051 aa23.63■■□□□ 1.37
OTUB1-210ENST00000541478 PPARAQ07869 468 aa23.63■■□□□ 1.37
OTUB1-210ENST00000541478 SART3Q15020 963 aaKnown RBP23.63■■□□□ 1.37
OTUB1-210ENST00000541478 TXNRD3Q86VQ6 643 aa23.63■■□□□ 1.37
OTUB1-210ENST00000541478 AKT1S1Q96B36 256 aa23.63■■□□□ 1.37
OTUB1-210ENST00000541478 CRAMP1Q96RY5 1269 aa23.63■■□□□ 1.37
OTUB1-210ENST00000541478 SCAND2PQ9GZW5 306 aaPredicted RBP23.63■■□□□ 1.37
OTUB1-210ENST00000541478 NSFL1CQ9UNZ2 370 aaKnown RBP23.63■■□□□ 1.37
OTUB1-210ENST00000541478 KLRG2A4D1S0 409 aaPredicted RBP23.63■■□□□ 1.37
OTUB1-210ENST00000541478 GADD45BO75293 160 aaPredicted RBP23.63■■□□□ 1.37
OTUB1-210ENST00000541478 LIFRP42702 1097 aa23.63■■□□□ 1.37
OTUB1-210ENST00000541478 ZNF827Q17R98 1081 aa23.63■■□□□ 1.37
OTUB1-210ENST00000541478 SGMS1Q86VZ5 419 aa23.63■■□□□ 1.37
OTUB1-210ENST00000541478 SDR42E1Q8WUS8 393 aa23.63■■□□□ 1.37
OTUB1-210ENST00000541478 RBM27Q9P2N5 1060 aaKnown RBP23.63■■□□□ 1.37
OTUB1-210ENST00000541478 ANAPC4Q9UJX5 808 aa23.63■■□□□ 1.37
OTUB1-210ENST00000541478 HPS5Q9UPZ3 1129 aa23.63■■□□□ 1.37
OTUB1-210ENST00000541478 ELP1O95163 1332 aa23.62■■□□□ 1.37
OTUB1-210ENST00000541478 XRCC6P12956 609 aaKnown RBP eCLIP23.62■■□□□ 1.37
OTUB1-210ENST00000541478 TMEM67Q5HYA8 995 aa23.62■■□□□ 1.37
OTUB1-210ENST00000541478 GGA1Q9UJY5 639 aa23.62■■□□□ 1.37
OTUB1-210ENST00000541478 KDM4AO75164 1064 aa23.61■■□□□ 1.37
OTUB1-210ENST00000541478 CDKL5O76039 1030 aa23.61■■□□□ 1.37
OTUB1-210ENST00000541478 CPLX2Q6PUV4 134 aaKnown RBP23.61■■□□□ 1.37
OTUB1-210ENST00000541478 GAS2L3Q86XJ1 694 aa23.61■■□□□ 1.37
OTUB1-210ENST00000541478 DZIP1Q86YF9 867 aaKnown RBP23.61■■□□□ 1.37
OTUB1-210ENST00000541478 TDRD7Q8NHU6 1098 aaKnown RBP23.61■■□□□ 1.37
OTUB1-210ENST00000541478 IGDCC4Q8TDY8 1250 aa23.61■■□□□ 1.37
OTUB1-210ENST00000541478 ZSWIM5Q9P217 1185 aa23.61■■□□□ 1.37
OTUB1-210ENST00000541478 CCDC88AQ3V6T2 1871 aa23.61■■□□□ 1.37
OTUB1-210ENST00000541478 PCP11498 1178 aaKnown RBP23.61■■□□□ 1.37
OTUB1-210ENST00000541478 PRDX5P30044 214 aa23.61■■□□□ 1.37
OTUB1-210ENST00000541478 METAP2P50579 478 aaKnown RBP eCLIP23.61■■□□□ 1.37
OTUB1-210ENST00000541478 GPSM2P81274 684 aa23.61■■□□□ 1.37
OTUB1-210ENST00000541478 RESTQ13127 1097 aa23.61■■□□□ 1.37
OTUB1-210ENST00000541478 NFXL1Q6ZNB6 911 aa23.61■■□□□ 1.37
OTUB1-210ENST00000541478 ZNF384Q8TF68 577 aa23.61■■□□□ 1.37
OTUB1-210ENST00000541478 TOMM22Q9NS69 142 aa23.61■■□□□ 1.37
OTUB1-210ENST00000541478 ERICH2A1L162 156 aa23.6■■□□□ 1.37
OTUB1-210ENST00000541478 IFIT3O14879 490 aaKnown RBP23.6■■□□□ 1.37
OTUB1-210ENST00000541478 UFL1O94874 794 aa23.6■■□□□ 1.37
OTUB1-210ENST00000541478 APOA5Q6Q788 366 aa23.6■■□□□ 1.37
OTUB1-210ENST00000541478 CRNKL1Q9BZJ0 848 aaKnown RBP23.6■■□□□ 1.37
OTUB1-210ENST00000541478 LY9Q9HBG7 655 aa23.6■■□□□ 1.37
OTUB1-210ENST00000541478 PODXL2Q9NZ53 605 aa23.6■■□□□ 1.37
OTUB1-210ENST00000541478 DUOX1Q9NRD9 1551 aa23.6■■□□□ 1.37
OTUB1-210ENST00000541478 DYNLL1P63167 89 aaKnown RBP23.59■■□□□ 1.37
OTUB1-210ENST00000541478 MINDY4BA8MYZ0 360 aa23.59■■□□□ 1.37
OTUB1-210ENST00000541478 ZBTB43O43298 467 aa23.59■■□□□ 1.37
OTUB1-210ENST00000541478 RRP12Q5JTH9 1297 aaKnown RBP23.59■■□□□ 1.37
OTUB1-210ENST00000541478 SYNE3Q6ZMZ3 975 aa23.59■■□□□ 1.37
OTUB1-210ENST00000541478 COL23A1Q86Y22 540 aaPredicted RBP23.59■■□□□ 1.37
OTUB1-210ENST00000541478 RGS22Q8NE09 1264 aa23.59■■□□□ 1.37
OTUB1-210ENST00000541478 CFAP45Q9UL16 551 aa23.59■■□□□ 1.37
OTUB1-210ENST00000541478 CCDC69A6NI79 296 aa23.58■■□□□ 1.37
OTUB1-210ENST00000541478 LDHBP07195 334 aaKnown RBP23.58■■□□□ 1.37
OTUB1-210ENST00000541478 TMTC2Q8N394 836 aa23.58■■□□□ 1.37
OTUB1-210ENST00000541478 ESR2Q92731 530 aa23.58■■□□□ 1.37
OTUB1-210ENST00000541478 ATP8A2Q9NTI2 1148 aa23.58■■□□□ 1.37
OTUB1-210ENST00000541478 SLC12A7Q9Y666 1083 aa23.58■■□□□ 1.37
OTUB1-210ENST00000541478 KIAA1551Q9HCM1 1747 aa23.58■■□□□ 1.36
OTUB1-210ENST00000541478 GSTO1P78417 241 aa23.57■■□□□ 1.36
OTUB1-210ENST00000541478 LRSAM1Q6UWE0 723 aa23.57■■□□□ 1.36
OTUB1-210ENST00000541478 AATFQ9NY61 560 aaKnown RBP eCLIP23.57■■□□□ 1.36
OTUB1-210ENST00000541478 ORC3Q9UBD5 711 aaPredicted RBP23.57■■□□□ 1.36
OTUB1-210ENST00000541478 RGPD3A6NKT7 1758 aaPredicted RBP23.57■■□□□ 1.36
OTUB1-210ENST00000541478 RGPD4Q7Z3J3 1758 aa23.57■■□□□ 1.36
OTUB1-210ENST00000541478 FDPSP14324 419 aaKnown RBP23.56■■□□□ 1.36
OTUB1-210ENST00000541478 CCDC183Q5T5S1 534 aa23.56■■□□□ 1.36
OTUB1-210ENST00000541478 ATL3Q6DD88 541 aa23.56■■□□□ 1.36
OTUB1-210ENST00000541478 ILDR2Q71H61 639 aa23.56■■□□□ 1.36
OTUB1-210ENST00000541478 SPATA32Q96LK8 384 aa23.56■■□□□ 1.36
OTUB1-210ENST00000541478 INCENPQ9NQS7 918 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms