RNA–Protein interactions for RNA: ENST00000540708.5

ARL6IP4-218, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, human

TSL 2

Gene ARL6IP4, Length 1,782 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARL6IP4-218	ENST00000540708	ANTXR2	P58335	489 aa		29.29	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	CRNKL1	Q9BZJ0	848 aa	Known RBP	29.29	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	COA1	Q9GZY4	146 aa		29.29	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	EVC	P57679	992 aa		29.29	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	CTDSPL2	Q05D32	466 aa		29.29	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	AKNAD1	Q5T1N1	836 aa		29.29	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	CCDC125	Q86Z20	511 aa		29.29	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	CHMP4C	Q96CF2	233 aa		29.29	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	ZC3H12C	Q9C0D7	883 aa	Known RBP	29.29	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	AATF	Q9NY61	560 aa	Known RBP eCLIP	29.29	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	SYT1	P21579	422 aa		29.28	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	TBC1D22A	Q8WUA7	517 aa		29.28	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	STX6	O43752	255 aa		29.27	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	PDIA4	P13667	645 aa	Known RBP	29.27	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	OLFM4	Q6UX06	510 aa		29.27	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	MFSD6	Q6ZSS7	791 aa		29.27	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	SLC16A10	Q8TF71	515 aa		29.27	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	STAG1	Q8WVM7	1258 aa		29.27	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	CNKSR1	Q969H4	720 aa		29.27	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	KRT23	Q9C075	422 aa		29.27	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	NEDD4	P46934	1319 aa		29.27	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	RIMBP2	O15034	1052 aa		29.26	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	LDHC	P07864	332 aa		29.26	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	PPARA	Q07869	468 aa		29.26	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	FOXD4L5	Q5VV16	416 aa	Predicted RBP	29.26	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	29.26	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	RNF41	Q9H4P4	317 aa	Predicted RBP	29.26	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	ANAPC4	Q9UJX5	808 aa		29.26	■■■□□ 2.28
ARL6IP4-218	ENST00000540708	CHD4	Q14839	1912 aa		29.26	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	FAM205A	Q6ZU69	1335 aa		29.26	■■■□□ 2.27
ARL6IP4-218	ENST00000540708		B4E1Z4	1266 aa		29.26	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	EYA3	Q99504	573 aa		29.26	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	LLPH	Q9BRT6	129 aa	Known RBP	29.26	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	PDGFD	Q9GZP0	370 aa	Predicted RBP	29.26	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	PDIA3	P30101	505 aa	Known RBP	29.25	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	SCRN1	Q12765	414 aa		29.25	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	CYB5R4	Q7L1T6	521 aa		29.25	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	PDC	P20941	246 aa		29.24	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	CHRNA5	P30532	468 aa		29.24	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	TMEM87B	Q96K49	555 aa		29.24	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	ATP8A2	Q9NTI2	1148 aa		29.24	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	NAP1L2	Q9ULW6	460 aa	Predicted RBP	29.24	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	NOL10	Q9BSC4	688 aa	Known RBP	29.24	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	GPHN	Q9NQX3	736 aa	Predicted RBP	29.24	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	MINDY4B	A8MYZ0	360 aa		29.23	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	ZSCAN22	P10073	491 aa	Predicted RBP	29.23	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	GRIK5	Q16478	980 aa		29.23	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	MFSD14B	Q5SR56	506 aa		29.23	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	ANGEL1	Q9UNK9	670 aa	Known RBP	29.23	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	BAG3	O95817	575 aa		29.22	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	MCTP1	Q6DN14	999 aa		29.22	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	LARP1B	Q659C4	914 aa	Known RBP	29.21	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	CERS3	Q8IU89	383 aa		29.21	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	INCENP	Q9NQS7	918 aa		29.21	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	TACC3	Q9Y6A5	838 aa		29.21	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	MROH7-TTC4	A0A0A0MT08	1334 aa		29.21	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	KLF18	A0A0U1RQI7	1052 aa		29.21	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	SH2B2	O14492	632 aa	Predicted RBP	29.21	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	KDM4A	O75164	1064 aa		29.21	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	PPP4C	P60510	307 aa		29.21	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	SLF2	Q8IX21	1173 aa		29.21	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	C10orf71	Q711Q0	1435 aa		29.2	■■■□□ 2.27
ARL6IP4-218	ENST00000540708	TRAK2	O60296	914 aa		29.2	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	DTNB	O60941	627 aa		29.2	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	GTF2I	P78347	998 aa		29.2	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	DIXDC1	Q155Q3	683 aa		29.2	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	SMARCC2	Q8TAQ2	1214 aa		29.2	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	DCP1A	Q9NPI6	582 aa	Predicted RBP	29.2	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	TOMM22	Q9NS69	142 aa		29.2	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	BRPF3	Q9ULD4	1205 aa		29.2	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	SLX4	Q8IY92	1834 aa		29.2	■■■□□ 2.26
ARL6IP4-218	ENST00000540708		G3V3G9	751 aa		29.19	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	CCT2	P78371	535 aa	Known RBP	29.19	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	DCAF8	Q5TAQ9	597 aa		29.19	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	CTR9	Q6PD62	1173 aa		29.19	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	NKX2-3	Q8TAU0	364 aa		29.19	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	ZSWIM5	Q9P217	1185 aa		29.19	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	JAK2	O60674	1132 aa		29.18	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	PC	P11498	1178 aa	Known RBP	29.18	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	RRP12	Q5JTH9	1297 aa	Known RBP	29.18	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	MTMR6	Q9Y217	621 aa		29.18	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	GOLGA8B	A8MQT2	603 aa		29.18	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	HMGN5	P82970	282 aa	Known RBP	29.18	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	SKOR2	Q2VWA4	1001 aa	Predicted RBP	29.18	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	IGDCC4	Q8TDY8	1250 aa		29.18	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	MTA3	Q9BTC8	594 aa		29.18	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	ARPP21	Q9UBL0	812 aa	Predicted RBP	29.18	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	SUGT1	Q9Y2Z0	365 aa		29.18	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	BAZ2A	Q9UIF9	1905 aa	Known RBP	29.17	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	USP17L12	C9JPN9	530 aa		29.17	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	USP17L21	D6R901	530 aa		29.17	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	F13A1	P00488	732 aa		29.17	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	TMEM67	Q5HYA8	995 aa		29.17	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	CC2D2B	Q6DHV5	1058 aa		29.17	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	NSUN7	Q8NE18	718 aa	Known RBP	29.17	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	DHX16	O60231	1041 aa	Known RBP	29.16	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	SART3	Q15020	963 aa	Known RBP	29.16	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	DOK7	Q18PE1	504 aa		29.16	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	SBK1	Q52WX2	424 aa		29.16	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	FAM163A	Q96GL9	167 aa	Predicted RBP	29.16	■■■□□ 2.26

Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms