RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 STK38Q15208 465 aa13.43□□□□□ -0.26
C11orf54-214ENST00000540113 CCDC144BQ3MJ40 725 aa13.43□□□□□ -0.26
C11orf54-214ENST00000540113 PARP10Q53GL7 1025 aa13.43□□□□□ -0.26
C11orf54-214ENST00000540113 ZSCAN25Q6NSZ9 544 aa13.43□□□□□ -0.26
C11orf54-214ENST00000540113 PLA2G4DQ86XP0 818 aa13.43□□□□□ -0.26
C11orf54-214ENST00000540113 NIP7Q9Y221 180 aaKnown RBP eCLIP13.43□□□□□ -0.26
C11orf54-214ENST00000540113 TACC3Q9Y6A5 838 aa13.43□□□□□ -0.26
C11orf54-214ENST00000540113 GOLGA6L6A8MZA4 724 aa13.43□□□□□ -0.26
C11orf54-214ENST00000540113 CDC27P30260 824 aa13.43□□□□□ -0.26
C11orf54-214ENST00000540113 FAM160A1Q05DH4 1040 aa13.43□□□□□ -0.26
C11orf54-214ENST00000540113 TRDNQ13061 729 aa13.43□□□□□ -0.26
C11orf54-214ENST00000540113 ARID5BQ14865 1188 aa13.43□□□□□ -0.26
C11orf54-214ENST00000540113 SF3A1Q15459 793 aaKnown RBP13.43□□□□□ -0.26
C11orf54-214ENST00000540113 MICU3Q86XE3 530 aa13.43□□□□□ -0.26
C11orf54-214ENST00000540113 MAGEB6Q8N7X4 407 aa13.43□□□□□ -0.26
C11orf54-214ENST00000540113 FBXO18Q8NFZ0 1043 aa13.43□□□□□ -0.26
C11orf54-214ENST00000540113 ARMT1Q9H993 441 aa13.43□□□□□ -0.26
C11orf54-214ENST00000540113 SPTLC3Q9NUV7 552 aa13.43□□□□□ -0.26
C11orf54-214ENST00000540113 IQSEC3Q9UPP2 1182 aaPredicted RBP13.43□□□□□ -0.26
C11orf54-214ENST00000540113 ZNF831Q5JPB2 1677 aa13.43□□□□□ -0.26
C11orf54-214ENST00000540113 RTL9Q8NET4 1388 aa13.43□□□□□ -0.26
C11orf54-214ENST00000540113 PRKAB2O43741 272 aa13.42□□□□□ -0.26
C11orf54-214ENST00000540113 SLC5A1P13866 664 aa13.42□□□□□ -0.26
C11orf54-214ENST00000540113 SPATA5Q8NB90 893 aa13.42□□□□□ -0.26
C11orf54-214ENST00000540113 LINC00301Q8NCQ3 95 aa13.42□□□□□ -0.26
C11orf54-214ENST00000540113 AIDAQ96BJ3 306 aa13.42□□□□□ -0.26
C11orf54-214ENST00000540113 CLIP2Q9UDT6 1046 aa13.42□□□□□ -0.26
C11orf54-214ENST00000540113 TAF1P21675 1872 aa13.42□□□□□ -0.26
C11orf54-214ENST00000540113 WTIPA6NIX2 430 aaPredicted RBP13.42□□□□□ -0.26
C11orf54-214ENST00000540113 MARCKSP29966 332 aaPredicted RBP13.42□□□□□ -0.26
C11orf54-214ENST00000540113 MPHOSPH8Q99549 860 aa13.42□□□□□ -0.26
C11orf54-214ENST00000540113 RTEL1Q9NZ71 1219 aa13.42□□□□□ -0.26
C11orf54-214ENST00000540113 GOLGA6L19H0YKK7 550 aa13.41□□□□□ -0.26
C11orf54-214ENST00000540113 BIN1O00499 593 aa13.41□□□□□ -0.26
C11orf54-214ENST00000540113 MBD4O95243 580 aa13.41□□□□□ -0.26
C11orf54-214ENST00000540113 BCAMP50895 628 aa13.41□□□□□ -0.26
C11orf54-214ENST00000540113 STX1AQ16623 288 aa13.41□□□□□ -0.26
C11orf54-214ENST00000540113 CCDC152Q4G0S7 254 aa13.41□□□□□ -0.26
C11orf54-214ENST00000540113 MYSM1Q5VVJ2 828 aa13.41□□□□□ -0.26
C11orf54-214ENST00000540113 ISM2Q6H9L7 571 aa13.41□□□□□ -0.26
C11orf54-214ENST00000540113 FMR1NBQ8N0W7 255 aaPredicted RBP13.41□□□□□ -0.26
C11orf54-214ENST00000540113 LINC00116Q8NCU8 138 aa13.41□□□□□ -0.26
C11orf54-214ENST00000540113 MRPS27Q92552 414 aaKnown RBP13.41□□□□□ -0.26
C11orf54-214ENST00000540113 STRBPQ96SI9 672 aaKnown RBP13.41□□□□□ -0.26
C11orf54-214ENST00000540113 SDF4Q9BRK5 362 aa13.41□□□□□ -0.26
C11orf54-214ENST00000540113 ZKSCAN3Q9BRR0 538 aa13.41□□□□□ -0.26
C11orf54-214ENST00000540113 EPB41L4AQ9HCS5 686 aaPredicted RBP13.41□□□□□ -0.26
C11orf54-214ENST00000540113 SH2B2O14492 632 aaPredicted RBP13.41□□□□□ -0.26
C11orf54-214ENST00000540113 DHX16O60231 1041 aaKnown RBP13.41□□□□□ -0.26
C11orf54-214ENST00000540113 HSPA1LP34931 641 aa13.41□□□□□ -0.26
C11orf54-214ENST00000540113 METAP2P50579 478 aaKnown RBP eCLIP13.41□□□□□ -0.26
C11orf54-214ENST00000540113 KCNQ4P56696 695 aa13.41□□□□□ -0.26
C11orf54-214ENST00000540113 KIF23Q02241 960 aaPredicted RBP13.41□□□□□ -0.26
C11orf54-214ENST00000540113 CHD4Q14839 1912 aa13.41□□□□□ -0.26
C11orf54-214ENST00000540113 NFXL1Q6ZNB6 911 aa13.41□□□□□ -0.26
C11orf54-214ENST00000540113 C3orf67Q6ZVT6 689 aa13.41□□□□□ -0.26
C11orf54-214ENST00000540113 DHX40Q8IX18 779 aaKnown RBP13.41□□□□□ -0.26
C11orf54-214ENST00000540113 KLHL34Q8N239 644 aa13.41□□□□□ -0.26
C11orf54-214ENST00000540113 ANGEL1Q9UNK9 670 aaKnown RBP13.41□□□□□ -0.26
C11orf54-214ENST00000540113 WDR19Q8NEZ3 1342 aa13.4□□□□□ -0.26
C11orf54-214ENST00000540113 SPTLC2O15270 562 aa13.4□□□□□ -0.26
C11orf54-214ENST00000540113 RRP12Q5JTH9 1297 aaKnown RBP13.4□□□□□ -0.26
C11orf54-214ENST00000540113 SMIM5Q71RC9 77 aa13.4□□□□□ -0.26
C11orf54-214ENST00000540113 AOPEPQ8N6M6 819 aa13.4□□□□□ -0.26
C11orf54-214ENST00000540113 CACTINQ8WUQ7 758 aaKnown RBP13.4□□□□□ -0.26
C11orf54-214ENST00000540113 ALG1Q9BT22 464 aa13.4□□□□□ -0.26
C11orf54-214ENST00000540113 SCN7AQ01118 1682 aa13.4□□□□□ -0.26
C11orf54-214ENST00000540113 BECN2A8MW95 431 aa13.4□□□□□ -0.26
C11orf54-214ENST00000540113 FAM98CQ17RN3 349 aaKnown RBP13.4□□□□□ -0.26
C11orf54-214ENST00000540113 ADALQ6DHV7 355 aa13.4□□□□□ -0.26
C11orf54-214ENST00000540113 APOA5Q6Q788 366 aa13.4□□□□□ -0.26
C11orf54-214ENST00000540113 SYNE3Q6ZMZ3 975 aa13.4□□□□□ -0.26
C11orf54-214ENST00000540113 PTF1AQ7RTS3 328 aa13.4□□□□□ -0.26
C11orf54-214ENST00000540113 MIGA1Q8NAN2 632 aa13.4□□□□□ -0.26
C11orf54-214ENST00000540113 MYRIPQ8NFW9 859 aa13.4□□□□□ -0.26
C11orf54-214ENST00000540113 SMARCC1Q92922 1105 aaPredicted RBP13.4□□□□□ -0.26
C11orf54-214ENST00000540113 TOMM22Q9NS69 142 aa13.4□□□□□ -0.26
C11orf54-214ENST00000540113 USP21Q9UK80 565 aa13.4□□□□□ -0.26
C11orf54-214ENST00000540113 ECM29Q5VYK3 1845 aa13.4□□□□□ -0.26
C11orf54-214ENST00000540113 TIAM2Q8IVF5 1701 aa13.39□□□□□ -0.27
C11orf54-214ENST00000540113 SMIM22K7EJ46 135 aa13.39□□□□□ -0.27
C11orf54-214ENST00000540113 WDHD1O75717 1129 aaPredicted RBP13.39□□□□□ -0.27
C11orf54-214ENST00000540113 IFNL3Q8IZI9 196 aa13.39□□□□□ -0.27
C11orf54-214ENST00000540113 CCDC82Q8N4S0 544 aa13.39□□□□□ -0.27
C11orf54-214ENST00000540113 BCL11BQ9C0K0 894 aaPredicted RBP13.39□□□□□ -0.27
C11orf54-214ENST00000540113 ZMYM6O95789 1325 aa13.39□□□□□ -0.27
C11orf54-214ENST00000540113 DYNC1I1O14576 645 aa13.39□□□□□ -0.27
C11orf54-214ENST00000540113 CTAGE5O15320 804 aa13.39□□□□□ -0.27
C11orf54-214ENST00000540113 CHRNDQ07001 517 aa13.39□□□□□ -0.27
C11orf54-214ENST00000540113 TMEM67Q5HYA8 995 aa13.39□□□□□ -0.27
C11orf54-214ENST00000540113 KRT40Q6A162 431 aa13.39□□□□□ -0.27
C11orf54-214ENST00000540113 ATL3Q6DD88 541 aa13.39□□□□□ -0.27
C11orf54-214ENST00000540113 CMTR1Q8N1G2 835 aaKnown RBP13.39□□□□□ -0.27
C11orf54-214ENST00000540113 LCORLQ8N3X6 602 aa13.39□□□□□ -0.27
C11orf54-214ENST00000540113 IGDCC4Q8TDY8 1250 aa13.39□□□□□ -0.27
C11orf54-214ENST00000540113 ZSWIM5Q9P217 1185 aa13.39□□□□□ -0.27
C11orf54-214ENST00000540113 MROH7-TTC4A0A0A0MT08 1334 aa13.38□□□□□ -0.27
C11orf54-214ENST00000540113 RANBP6O60518 1105 aaKnown RBP13.38□□□□□ -0.27
C11orf54-214ENST00000540113 TPM3P06753 285 aa13.38□□□□□ -0.27
C11orf54-214ENST00000540113 IGHMBP2P38935 993 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms