RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 ZBTB40Q9NUA8 1239 aa7.99□□□□□ -1.13
SNHG1-212ENST00000539975 PODXL2Q9NZ53 605 aa7.99□□□□□ -1.13
SNHG1-212ENST00000539975 AKAP2Q9Y2D5 859 aa7.99□□□□□ -1.13
SNHG1-212ENST00000539975 LTBP3Q9NS15 1303 aa7.99□□□□□ -1.13
SNHG1-212ENST00000539975 CIAO1O76071 339 aa7.98□□□□□ -1.13
SNHG1-212ENST00000539975 IFIT1P09914 478 aaKnown RBP7.98□□□□□ -1.13
SNHG1-212ENST00000539975 NDUFV2P19404 249 aa7.98□□□□□ -1.13
SNHG1-212ENST00000539975 MMP16P51512 607 aa7.98□□□□□ -1.13
SNHG1-212ENST00000539975 GORABQ5T7V8 394 aa7.98□□□□□ -1.13
SNHG1-212ENST00000539975 OLFM4Q6UX06 510 aa7.98□□□□□ -1.13
SNHG1-212ENST00000539975 TBC1D16Q8TBP0 767 aa7.98□□□□□ -1.13
SNHG1-212ENST00000539975 RTFDC1Q9BY42 306 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-212ENST00000539975 GPBP1L1Q9HC44 474 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-212ENST00000539975 COPRSQ9NQ92 184 aa7.98□□□□□ -1.13
SNHG1-212ENST00000539975 PCDHGC3Q9UN70 934 aa7.98□□□□□ -1.13
SNHG1-212ENST00000539975 AFDNP55196 1824 aaKnown RBP7.98□□□□□ -1.13
SNHG1-212ENST00000539975 ZNF804BA4D1E1 1349 aa7.98□□□□□ -1.13
SNHG1-212ENST00000539975 NFKBIEO00221 500 aa7.97□□□□□ -1.13
SNHG1-212ENST00000539975 TAF5LO75529 589 aa7.97□□□□□ -1.13
SNHG1-212ENST00000539975 PDE8BO95263 885 aa7.97□□□□□ -1.13
SNHG1-212ENST00000539975 SLC5A1P13866 664 aa7.97□□□□□ -1.13
SNHG1-212ENST00000539975 YY1P25490 414 aa7.97□□□□□ -1.13
SNHG1-212ENST00000539975 GUCA2AQ02747 115 aa7.97□□□□□ -1.13
SNHG1-212ENST00000539975 RASSF7Q02833 373 aa7.97□□□□□ -1.13
SNHG1-212ENST00000539975 PTPN12Q05209 780 aaKnown RBP7.97□□□□□ -1.13
SNHG1-212ENST00000539975 KIAA2012Q0VF49 1180 aa7.97□□□□□ -1.13
SNHG1-212ENST00000539975 UBE4AQ14139 1066 aa7.97□□□□□ -1.13
SNHG1-212ENST00000539975 TNIP1Q15025 636 aa7.97□□□□□ -1.13
SNHG1-212ENST00000539975 PUM3Q15397 648 aaKnown RBP7.97□□□□□ -1.13
SNHG1-212ENST00000539975 AOC3Q16853 763 aa7.97□□□□□ -1.13
SNHG1-212ENST00000539975 PRPF38BQ5VTL8 546 aaKnown RBP7.97□□□□□ -1.13
SNHG1-212ENST00000539975 MYSM1Q5VVJ2 828 aa7.97□□□□□ -1.13
SNHG1-212ENST00000539975 CEP85Q6P2H3 762 aa7.97□□□□□ -1.13
SNHG1-212ENST00000539975 ZNF804AQ7Z570 1209 aa7.97□□□□□ -1.13
SNHG1-212ENST00000539975 HELBQ8NG08 1087 aaPredicted RBP7.97□□□□□ -1.13
SNHG1-212ENST00000539975 KLHDC4Q8TBB5 520 aa7.97□□□□□ -1.13
SNHG1-212ENST00000539975 CRBNQ96SW2 442 aa7.97□□□□□ -1.13
SNHG1-212ENST00000539975 GNL3LQ9NVN8 582 aaKnown RBP7.97□□□□□ -1.13
SNHG1-212ENST00000539975 KDM2BQ8NHM5 1336 aa7.97□□□□□ -1.13
SNHG1-212ENST00000539975 ZC3H4Q9UPT8 1303 aaKnown RBP7.97□□□□□ -1.13
SNHG1-212ENST00000539975 KIF13BQ9NQT8 1826 aa7.96□□□□□ -1.13
SNHG1-212ENST00000539975 PNMA6EA0A0J9YXQ4 647 aa7.96□□□□□ -1.14
SNHG1-212ENST00000539975 RAB11FIP3O75154 756 aa7.96□□□□□ -1.14
SNHG1-212ENST00000539975 PODNQ7Z5L7 613 aa7.96□□□□□ -1.14
SNHG1-212ENST00000539975 SSH3Q8TE77 659 aa7.96□□□□□ -1.14
SNHG1-212ENST00000539975 LPIN2Q92539 896 aa7.96□□□□□ -1.14
SNHG1-212ENST00000539975 NEUROD6Q96NK8 337 aa7.96□□□□□ -1.14
SNHG1-212ENST00000539975 PUS3Q9BZE2 481 aaKnown RBP7.96□□□□□ -1.14
SNHG1-212ENST00000539975 BCL11AQ9H165 835 aa7.96□□□□□ -1.14
SNHG1-212ENST00000539975 RWDD1Q9H446 243 aaPredicted RBP7.96□□□□□ -1.14
SNHG1-212ENST00000539975 POLLQ9UGP5 575 aa7.96□□□□□ -1.14
SNHG1-212ENST00000539975 ZNRF3Q9ULT6 936 aa7.96□□□□□ -1.14
SNHG1-212ENST00000539975 RIPOR2Q9Y4F9 1068 aa7.96□□□□□ -1.14
SNHG1-212ENST00000539975 N4BP2Q86UW6 1770 aaPredicted RBP7.96□□□□□ -1.14
SNHG1-212ENST00000539975 APBB1O00213 710 aa7.95□□□□□ -1.14
SNHG1-212ENST00000539975 DXOO77932 396 aaKnown RBP7.95□□□□□ -1.14
SNHG1-212ENST00000539975 LMOD1P29536 600 aaPredicted RBP7.95□□□□□ -1.14
SNHG1-212ENST00000539975 HIBADHP31937 336 aaKnown RBP7.95□□□□□ -1.14
SNHG1-212ENST00000539975 MTMR2Q13614 643 aa7.95□□□□□ -1.14
SNHG1-212ENST00000539975 ATP2B3Q16720 1220 aa7.95□□□□□ -1.14
SNHG1-212ENST00000539975 LRRC24Q50LG9 513 aa7.95□□□□□ -1.14
SNHG1-212ENST00000539975 C16orf71Q8IYS4 520 aaPredicted RBP7.95□□□□□ -1.14
SNHG1-212ENST00000539975 CLASRPQ8N2M8 674 aaKnown RBP7.95□□□□□ -1.14
SNHG1-212ENST00000539975 PRKD2Q9BZL6 878 aa7.95□□□□□ -1.14
SNHG1-212ENST00000539975 FAM117AQ9C073 453 aa7.95□□□□□ -1.14
SNHG1-212ENST00000539975 COA1Q9GZY4 146 aa7.95□□□□□ -1.14
SNHG1-212ENST00000539975 PA2G4Q9UQ80 394 aaKnown RBP7.95□□□□□ -1.14
SNHG1-212ENST00000539975 GJA3Q9Y6H8 435 aa7.95□□□□□ -1.14
SNHG1-212ENST00000539975 TNRC6CQ9HCJ0 1690 aaKnown RBP7.95□□□□□ -1.14
SNHG1-212ENST00000539975 ECE2O60344 883 aa7.94□□□□□ -1.14
SNHG1-212ENST00000539975 IFIT2P09913 472 aaKnown RBP7.94□□□□□ -1.14
SNHG1-212ENST00000539975 RFX5P48382 616 aaPredicted RBP7.94□□□□□ -1.14
SNHG1-212ENST00000539975 IRX6P78412 446 aaPredicted RBP7.94□□□□□ -1.14
SNHG1-212ENST00000539975 TFCP2Q12800 502 aa7.94□□□□□ -1.14
SNHG1-212ENST00000539975 SKIV2LQ15477 1246 aaKnown RBP7.94□□□□□ -1.14
SNHG1-212ENST00000539975 SH3D19Q5HYK7 790 aa7.94□□□□□ -1.14
SNHG1-212ENST00000539975 CCDC158Q5M9N0 1113 aa7.94□□□□□ -1.14
SNHG1-212ENST00000539975 CIAPIN1Q6FI81 312 aa7.94□□□□□ -1.14
SNHG1-212ENST00000539975 DESI1Q6ICB0 168 aa7.94□□□□□ -1.14
SNHG1-212ENST00000539975 OGFOD1Q8N543 542 aa7.94□□□□□ -1.14
SNHG1-212ENST00000539975 KIF1BPQ96EK5 621 aa7.94□□□□□ -1.14
SNHG1-212ENST00000539975 DBNDD1Q9H9R9 158 aa7.94□□□□□ -1.14
SNHG1-212ENST00000539975 MED23Q9ULK4 1368 aa7.94□□□□□ -1.14
SNHG1-212ENST00000539975 ANKRD31Q8N7Z5 1873 aa7.94□□□□□ -1.14
SNHG1-212ENST00000539975 DDX60Q8IY21 1712 aaKnown RBP7.93□□□□□ -1.14
SNHG1-212ENST00000539975 IQCA1LA6NCM1 817 aa7.93□□□□□ -1.14
SNHG1-212ENST00000539975 GLTPD2A6NH11 291 aa7.93□□□□□ -1.14
SNHG1-212ENST00000539975 JUNDP17535 347 aa7.93□□□□□ -1.14
SNHG1-212ENST00000539975 SLC19A1P41440 591 aa7.93□□□□□ -1.14
SNHG1-212ENST00000539975 RPIAP49247 311 aa7.93□□□□□ -1.14
SNHG1-212ENST00000539975 CLK2P49760 499 aaKnown RBP7.93□□□□□ -1.14
SNHG1-212ENST00000539975 ATG9AQ7Z3C6 839 aa7.93□□□□□ -1.14
SNHG1-212ENST00000539975 GPC2Q8N158 579 aa7.93□□□□□ -1.14
SNHG1-212ENST00000539975 EXOC6Q8TAG9 804 aa7.93□□□□□ -1.14
SNHG1-212ENST00000539975 ZNF526Q8TF50 670 aaPredicted RBP7.93□□□□□ -1.14
SNHG1-212ENST00000539975 SYMPKQ92797 1274 aaKnown RBP7.93□□□□□ -1.14
SNHG1-212ENST00000539975 GPATCH3Q96I76 525 aa7.93□□□□□ -1.14
SNHG1-212ENST00000539975 LRRCC1Q9C099 1032 aa7.93□□□□□ -1.14
SNHG1-212ENST00000539975 GOPCQ9HD26 462 aa7.93□□□□□ -1.14
SNHG1-212ENST00000539975 EXOC6BQ9Y2D4 811 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 465.7 ms