RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 NOL7Q9UMY1 257 aaKnown RBP20.14■□□□□ 0.81
PCDHB17P-201ENST00000539533 MAGEB6P1A0A0J9YX57 407 aa20.13■□□□□ 0.81
PCDHB17P-201ENST00000539533 ALX1Q15699 326 aa20.13■□□□□ 0.81
PCDHB17P-201ENST00000539533 BRF1Q92994 677 aa20.13■□□□□ 0.81
PCDHB17P-201ENST00000539533 ZNF622Q969S3 477 aaKnown RBP eCLIP20.13■□□□□ 0.81
PCDHB17P-201ENST00000539533 GOLGB1Q14789 3259 aaKnown RBP20.13■□□□□ 0.81
PCDHB17P-201ENST00000539533 DYNLL1P63167 89 aaKnown RBP20.13■□□□□ 0.81
PCDHB17P-201ENST00000539533 FGD1P98174 961 aa20.13■□□□□ 0.81
PCDHB17P-201ENST00000539533 STK3Q13188 491 aa20.13■□□□□ 0.81
PCDHB17P-201ENST00000539533 RIOK1Q9BRS2 568 aaKnown RBP20.13■□□□□ 0.81
PCDHB17P-201ENST00000539533 NAPBQ9H115 298 aa20.13■□□□□ 0.81
PCDHB17P-201ENST00000539533 CD209Q9NNX6 404 aa20.13■□□□□ 0.81
PCDHB17P-201ENST00000539533 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.13■□□□□ 0.81
PCDHB17P-201ENST00000539533 FOXD4L5Q5VV16 416 aaPredicted RBP20.12■□□□□ 0.81
PCDHB17P-201ENST00000539533 C2CD5Q86YS7 1000 aa20.12■□□□□ 0.81
PCDHB17P-201ENST00000539533 TBC1D10CQ8IV04 446 aa20.12■□□□□ 0.81
PCDHB17P-201ENST00000539533 FOXD4L4Q8WXT5 416 aaPredicted RBP20.12■□□□□ 0.81
PCDHB17P-201ENST00000539533 LRRC37AA6NMS7 1700 aa20.12■□□□□ 0.81
PCDHB17P-201ENST00000539533 SYCE3A1L190 88 aa20.12■□□□□ 0.81
PCDHB17P-201ENST00000539533 ZBTB22O15209 634 aa20.12■□□□□ 0.81
PCDHB17P-201ENST00000539533 GNAT2P19087 354 aa20.12■□□□□ 0.81
PCDHB17P-201ENST00000539533 SDR42E1Q8WUS8 393 aa20.12■□□□□ 0.81
PCDHB17P-201ENST00000539533 MBD3O95983 291 aa20.11■□□□□ 0.81
PCDHB17P-201ENST00000539533 NKX2-3Q8TAU0 364 aa20.11■□□□□ 0.81
PCDHB17P-201ENST00000539533 BRD1O95696 1058 aa20.1■□□□□ 0.81
PCDHB17P-201ENST00000539533 GRIK5Q16478 980 aa20.1■□□□□ 0.81
PCDHB17P-201ENST00000539533 MB21D2Q8IYB1 491 aaPredicted RBP20.1■□□□□ 0.81
PCDHB17P-201ENST00000539533 WDR66Q8TBY9 1149 aa20.1■□□□□ 0.81
PCDHB17P-201ENST00000539533 INCENPQ9NQS7 918 aa20.1■□□□□ 0.81
PCDHB17P-201ENST00000539533 SMC3Q9UQE7 1217 aa20.1■□□□□ 0.81
PCDHB17P-201ENST00000539533 LTBP1Q14766 1721 aa20.1■□□□□ 0.81
PCDHB17P-201ENST00000539533 ZNF500O60304 480 aaPredicted RBP20.1■□□□□ 0.81
PCDHB17P-201ENST00000539533 NCOA7Q8NI08 942 aa20.1■□□□□ 0.81
PCDHB17P-201ENST00000539533 AGXT2Q9BYV1 514 aa20.1■□□□□ 0.81
PCDHB17P-201ENST00000539533 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.1■□□□□ 0.81
PCDHB17P-201ENST00000539533 QSER1Q2KHR3 1735 aa20.1■□□□□ 0.81
PCDHB17P-201ENST00000539533 ZMYM6O95789 1325 aa20.1■□□□□ 0.81
PCDHB17P-201ENST00000539533 H0YIN7 160 aa20.09■□□□□ 0.81
PCDHB17P-201ENST00000539533 RIMBP2O15034 1052 aa20.09■□□□□ 0.81
PCDHB17P-201ENST00000539533 IL1R1P14778 569 aa20.09■□□□□ 0.81
PCDHB17P-201ENST00000539533 CHRNA5P30532 468 aa20.09■□□□□ 0.81
PCDHB17P-201ENST00000539533 TDO2P48775 406 aa20.09■□□□□ 0.81
PCDHB17P-201ENST00000539533 RBM10P98175 930 aaKnown RBP20.09■□□□□ 0.81
PCDHB17P-201ENST00000539533 NACAP1Q9BZK3 213 aa20.09■□□□□ 0.81
PCDHB17P-201ENST00000539533 GPHNQ9NQX3 736 aaPredicted RBP20.09■□□□□ 0.81
PCDHB17P-201ENST00000539533 SALL1Q9NSC2 1324 aa20.09■□□□□ 0.81
PCDHB17P-201ENST00000539533 TERF1P54274 439 aa20.09■□□□□ 0.81
PCDHB17P-201ENST00000539533 CTDSPL2Q05D32 466 aa20.09■□□□□ 0.81
PCDHB17P-201ENST00000539533 APOBRQ0VD83 1088 aa20.09■□□□□ 0.81
PCDHB17P-201ENST00000539533 MPNDQ8N594 471 aa20.09■□□□□ 0.81
PCDHB17P-201ENST00000539533 GJB2P29033 226 aa20.08■□□□□ 0.81
PCDHB17P-201ENST00000539533 SPTY2D1Q68D10 685 aaPredicted RBP20.08■□□□□ 0.81
PCDHB17P-201ENST00000539533 RALYLQ86SE5 291 aaKnown RBP20.08■□□□□ 0.81
PCDHB17P-201ENST00000539533 AATFQ9NY61 560 aaKnown RBP eCLIP20.08■□□□□ 0.81
PCDHB17P-201ENST00000539533 LDHBP07195 334 aaKnown RBP20.08■□□□□ 0.8
PCDHB17P-201ENST00000539533 MCM5P33992 734 aa20.08■□□□□ 0.8
PCDHB17P-201ENST00000539533 ANTXR2P58335 489 aa20.08■□□□□ 0.8
PCDHB17P-201ENST00000539533 DZIP1Q86YF9 867 aaKnown RBP20.08■□□□□ 0.8
PCDHB17P-201ENST00000539533 TACC3Q9Y6A5 838 aa20.08■□□□□ 0.8
PCDHB17P-201ENST00000539533 PRC1O43663 620 aa20.07■□□□□ 0.8
PCDHB17P-201ENST00000539533 TRDNQ13061 729 aa20.07■□□□□ 0.8
PCDHB17P-201ENST00000539533 DPP8Q6V1X1 898 aaPredicted RBP20.07■□□□□ 0.8
PCDHB17P-201ENST00000539533 NEDD4P46934 1319 aa20.06■□□□□ 0.8
PCDHB17P-201ENST00000539533 CCDC88AQ3V6T2 1871 aa20.06■□□□□ 0.8
PCDHB17P-201ENST00000539533 B4E1Z4 1266 aa20.06■□□□□ 0.8
PCDHB17P-201ENST00000539533 STK11IPQ8N1F8 1099 aa20.06■□□□□ 0.8
PCDHB17P-201ENST00000539533 GTF3C6Q969F1 213 aa20.06■□□□□ 0.8
PCDHB17P-201ENST00000539533 ZKSCAN5Q9Y2L8 839 aa20.06■□□□□ 0.8
PCDHB17P-201ENST00000539533 STYK1Q6J9G0 422 aa20.06■□□□□ 0.8
PCDHB17P-201ENST00000539533 CYB5R4Q7L1T6 521 aa20.06■□□□□ 0.8
PCDHB17P-201ENST00000539533 DUOX1Q9NRD9 1551 aa20.06■□□□□ 0.8
PCDHB17P-201ENST00000539533 SMIM22K7EJ46 135 aa20.05■□□□□ 0.8
PCDHB17P-201ENST00000539533 SYT1P21579 422 aa20.05■□□□□ 0.8
PCDHB17P-201ENST00000539533 DIXDC1Q155Q3 683 aa20.05■□□□□ 0.8
PCDHB17P-201ENST00000539533 FBXL16Q8N461 479 aa20.05■□□□□ 0.8
PCDHB17P-201ENST00000539533 ZNF219Q9P2Y4 722 aaPredicted RBP20.05■□□□□ 0.8
PCDHB17P-201ENST00000539533 SCRN1Q12765 414 aa20.05■□□□□ 0.8
PCDHB17P-201ENST00000539533 ZC3H12CQ9C0D7 883 aaKnown RBP20.05■□□□□ 0.8
PCDHB17P-201ENST00000539533 TMX4Q9H1E5 349 aaPredicted RBP20.05■□□□□ 0.8
PCDHB17P-201ENST00000539533 R3HCC1Q9Y3T6 440 aaKnown RBP20.05■□□□□ 0.8
PCDHB17P-201ENST00000539533 MINDY4BA8MYZ0 360 aa20.04■□□□□ 0.8
PCDHB17P-201ENST00000539533 NAP1L2Q9ULW6 460 aaPredicted RBP20.04■□□□□ 0.8
PCDHB17P-201ENST00000539533 PFKFB2O60825 505 aa20.03■□□□□ 0.8
PCDHB17P-201ENST00000539533 AKNAD1Q5T1N1 836 aa20.03■□□□□ 0.8
PCDHB17P-201ENST00000539533 CCDC39Q9UFE4 941 aa20.03■□□□□ 0.8
PCDHB17P-201ENST00000539533 PDIA3P30101 505 aaKnown RBP20.03■□□□□ 0.8
PCDHB17P-201ENST00000539533 CCT2P78371 535 aaKnown RBP20.03■□□□□ 0.8
PCDHB17P-201ENST00000539533 PPARAQ07869 468 aa20.03■□□□□ 0.8
PCDHB17P-201ENST00000539533 MAST2Q6P0Q8 1798 aa20.03■□□□□ 0.8
PCDHB17P-201ENST00000539533 SLX4Q8IY92 1834 aa20.03■□□□□ 0.8
PCDHB17P-201ENST00000539533 CYP2D7A0A087X1C5 515 aa20.02■□□□□ 0.8
PCDHB17P-201ENST00000539533 STX6O43752 255 aa20.02■□□□□ 0.8
PCDHB17P-201ENST00000539533 DOK7Q18PE1 504 aa20.02■□□□□ 0.8
PCDHB17P-201ENST00000539533 MFSD14BQ5SR56 506 aa20.02■□□□□ 0.8
PCDHB17P-201ENST00000539533 MFSD6Q6ZSS7 791 aa20.02■□□□□ 0.8
PCDHB17P-201ENST00000539533 RNF214Q8ND24 703 aa20.02■□□□□ 0.8
PCDHB17P-201ENST00000539533 COA1Q9GZY4 146 aa20.02■□□□□ 0.8
PCDHB17P-201ENST00000539533 FAM13BQ9NYF5 915 aa20.02■□□□□ 0.8
PCDHB17P-201ENST00000539533 CHD4Q14839 1912 aa20.02■□□□□ 0.8
PCDHB17P-201ENST00000539533 JAK2O60674 1132 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms