RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 CCDC144CPQ8IYA2 1237 aa20.48■□□□□ 0.87
SNX17-210ENST00000537606 ANKRD2Q9GZV1 360 aa20.48■□□□□ 0.87
SNX17-210ENST00000537606 ZSWIM5Q9P217 1185 aa20.48■□□□□ 0.87
SNX17-210ENST00000537606 ANKIB1Q9P2G1 1089 aa20.48■□□□□ 0.87
SNX17-210ENST00000537606 ANGEL1Q9UNK9 670 aaKnown RBP20.48■□□□□ 0.87
SNX17-210ENST00000537606 PNPLA7Q6ZV29 1317 aa20.48■□□□□ 0.87
SNX17-210ENST00000537606 TNRC6CQ9HCJ0 1690 aaKnown RBP20.48■□□□□ 0.87
SNX17-210ENST00000537606 MAGEB6P1A0A0J9YX57 407 aa20.48■□□□□ 0.87
SNX17-210ENST00000537606 CCDC183Q5T5S1 534 aa20.48■□□□□ 0.87
SNX17-210ENST00000537606 NACAP1Q9BZK3 213 aa20.48■□□□□ 0.87
SNX17-210ENST00000537606 ESPNB1AK53 854 aa20.47■□□□□ 0.87
SNX17-210ENST00000537606 SPATA32Q96LK8 384 aa20.47■□□□□ 0.87
SNX17-210ENST00000537606 GPR101Q96P66 508 aaPredicted RBP20.47■□□□□ 0.87
SNX17-210ENST00000537606 MINDY4BA8MYZ0 360 aa20.47■□□□□ 0.87
SNX17-210ENST00000537606 SH2B2O14492 632 aaPredicted RBP20.47■□□□□ 0.87
SNX17-210ENST00000537606 GNAT2P19087 354 aa20.47■□□□□ 0.87
SNX17-210ENST00000537606 ZKSCAN3Q9BRR0 538 aa20.47■□□□□ 0.87
SNX17-210ENST00000537606 MYL10Q9BUA6 226 aa20.47■□□□□ 0.87
SNX17-210ENST00000537606 GJB4Q9NTQ9 266 aa20.47■□□□□ 0.87
SNX17-210ENST00000537606 CPLX1O14810 134 aa20.46■□□□□ 0.87
SNX17-210ENST00000537606 ADD1P35611 737 aaKnown RBP20.46■□□□□ 0.87
SNX17-210ENST00000537606 AKNAD1Q5T1N1 836 aa20.46■□□□□ 0.87
SNX17-210ENST00000537606 NAA16Q6N069 864 aaPredicted RBP20.46■□□□□ 0.87
SNX17-210ENST00000537606 MFSD6Q6ZSS7 791 aa20.46■□□□□ 0.87
SNX17-210ENST00000537606 PROM2Q8N271 834 aa20.46■□□□□ 0.87
SNX17-210ENST00000537606 IGDCC4Q8TDY8 1250 aa20.46■□□□□ 0.87
SNX17-210ENST00000537606 FTOQ9C0B1 505 aaKnown RBP eCLIP20.46■□□□□ 0.87
SNX17-210ENST00000537606 WDR19Q8NEZ3 1342 aa20.45■□□□□ 0.87
SNX17-210ENST00000537606 ADRA2BP18089 450 aa20.45■□□□□ 0.86
SNX17-210ENST00000537606 PRDX5P30044 214 aa20.45■□□□□ 0.86
SNX17-210ENST00000537606 GRAPQ13588 217 aa20.45■□□□□ 0.86
SNX17-210ENST00000537606 TMEM67Q5HYA8 995 aa20.45■□□□□ 0.86
SNX17-210ENST00000537606 GIMAP6Q6P9H5 292 aa20.45■□□□□ 0.86
SNX17-210ENST00000537606 NFXL1Q6ZNB6 911 aa20.45■□□□□ 0.86
SNX17-210ENST00000537606 MICU3Q86XE3 530 aa20.45■□□□□ 0.86
SNX17-210ENST00000537606 GRAPLQ8TC17 118 aaPredicted RBP20.45■□□□□ 0.86
SNX17-210ENST00000537606 LEO1Q8WVC0 666 aaPredicted RBP20.45■□□□□ 0.86
SNX17-210ENST00000537606 RIOK1Q9BRS2 568 aaKnown RBP20.45■□□□□ 0.86
SNX17-210ENST00000537606 SERPINB2P05120 415 aa20.45■□□□□ 0.86
SNX17-210ENST00000537606 ORC3Q9UBD5 711 aaPredicted RBP20.45■□□□□ 0.86
SNX17-210ENST00000537606 KIF3AQ9Y496 699 aa20.45■□□□□ 0.86
SNX17-210ENST00000537606 ZMYM6O95789 1325 aa20.44■□□□□ 0.86
SNX17-210ENST00000537606 MECOMQ03112 1051 aa20.44■□□□□ 0.86
SNX17-210ENST00000537606 ZSCAN16Q9H4T2 348 aaPredicted RBP20.44■□□□□ 0.86
SNX17-210ENST00000537606 BRWD3Q6RI45 1802 aa20.44■□□□□ 0.86
SNX17-210ENST00000537606 CYP2D7A0A087X1C5 515 aa20.44■□□□□ 0.86
SNX17-210ENST00000537606 IFIT3O14879 490 aaKnown RBP20.44■□□□□ 0.86
SNX17-210ENST00000537606 DHX16O60231 1041 aaKnown RBP20.44■□□□□ 0.86
SNX17-210ENST00000537606 SLC27A3Q5K4L6 730 aa20.44■□□□□ 0.86
SNX17-210ENST00000537606 APOA5Q6Q788 366 aa20.44■□□□□ 0.86
SNX17-210ENST00000537606 SCAND2PQ9GZW5 306 aaPredicted RBP20.44■□□□□ 0.86
SNX17-210ENST00000537606 LY9Q9HBG7 655 aa20.44■□□□□ 0.86
SNX17-210ENST00000537606 LIG1P18858 919 aa20.43■□□□□ 0.86
SNX17-210ENST00000537606 CDC27P30260 824 aa20.43■□□□□ 0.86
SNX17-210ENST00000537606 METAP2P50579 478 aaKnown RBP eCLIP20.43■□□□□ 0.86
SNX17-210ENST00000537606 PPARAQ07869 468 aa20.43■□□□□ 0.86
SNX17-210ENST00000537606 TXNRD1Q16881 649 aa20.43■□□□□ 0.86
SNX17-210ENST00000537606 NSUN4Q96CB9 384 aaKnown RBP20.43■□□□□ 0.86
SNX17-210ENST00000537606 RPGRQ92834 1020 aaKnown RBP20.43■□□□□ 0.86
SNX17-210ENST00000537606 TMEM87BQ96K49 555 aa20.43■□□□□ 0.86
SNX17-210ENST00000537606 PDLIM2Q96JY6 352 aa20.42■□□□□ 0.86
SNX17-210ENST00000537606 AATFQ9NY61 560 aaKnown RBP eCLIP20.42■□□□□ 0.86
SNX17-210ENST00000537606 CACNA1SQ13698 1873 aa20.42■□□□□ 0.86
SNX17-210ENST00000537606 GOLGA6L4A6NEF3 574 aa20.42■□□□□ 0.86
SNX17-210ENST00000537606 STAG1Q8WVM7 1258 aa20.42■□□□□ 0.86
SNX17-210ENST00000537606 PHKBQ93100 1093 aa20.42■□□□□ 0.86
SNX17-210ENST00000537606 PGBD1Q96JS3 809 aa20.42■□□□□ 0.86
SNX17-210ENST00000537606 AIFM3Q96NN9 605 aa20.42■□□□□ 0.86
SNX17-210ENST00000537606 UBR3Q6ZT12 1888 aa20.41■□□□□ 0.86
SNX17-210ENST00000537606 ELP1O95163 1332 aa20.41■□□□□ 0.86
SNX17-210ENST00000537606 SEMA3EO15041 775 aa20.41■□□□□ 0.86
SNX17-210ENST00000537606 EVX2Q03828 476 aa20.41■□□□□ 0.86
SNX17-210ENST00000537606 DDR1Q08345 913 aa20.41■□□□□ 0.86
SNX17-210ENST00000537606 CHMP4CQ96CF2 233 aa20.41■□□□□ 0.86
SNX17-210ENST00000537606 C8orf76Q96K31 380 aa20.41■□□□□ 0.86
SNX17-210ENST00000537606 KRT23Q9C075 422 aa20.41■□□□□ 0.86
SNX17-210ENST00000537606 CNNM2Q9H8M5 875 aa20.41■□□□□ 0.86
SNX17-210ENST00000537606 ZBTB43O43298 467 aa20.41■□□□□ 0.86
SNX17-210ENST00000537606 CLCN1P35523 988 aa20.41■□□□□ 0.86
SNX17-210ENST00000537606 ILDR1Q86SU0 546 aaPredicted RBP20.41■□□□□ 0.86
SNX17-210ENST00000537606 ST5P78524 1137 aa20.4■□□□□ 0.86
SNX17-210ENST00000537606 IRS2Q9Y4H2 1338 aa20.4■□□□□ 0.86
SNX17-210ENST00000537606 GPSM2P81274 684 aa20.39■□□□□ 0.86
SNX17-210ENST00000537606 CAMK4Q16566 473 aa20.39■□□□□ 0.86
SNX17-210ENST00000537606 USP28Q96RU2 1077 aa20.39■□□□□ 0.86
SNX17-210ENST00000537606 SLC12A7Q9Y666 1083 aa20.39■□□□□ 0.86
SNX17-210ENST00000537606 CCDC69A6NI79 296 aa20.39■□□□□ 0.85
SNX17-210ENST00000537606 UBE2Q2LH0YL09 131 aa20.39■□□□□ 0.85
SNX17-210ENST00000537606 PRDM1O75626 825 aa20.39■□□□□ 0.85
SNX17-210ENST00000537606 POLR3DP05423 398 aaPredicted RBP20.39■□□□□ 0.85
SNX17-210ENST00000537606 CFAP45Q9UL16 551 aa20.39■□□□□ 0.85
SNX17-210ENST00000537606 GOLGB1Q14789 3259 aaKnown RBP20.39■□□□□ 0.85
SNX17-210ENST00000537606 CHD4Q14839 1912 aa20.38■□□□□ 0.85
SNX17-210ENST00000537606 GOLGA8AA7E2F4 631 aa20.38■□□□□ 0.85
SNX17-210ENST00000537606 SLC4A8Q2Y0W8 1093 aa20.38■□□□□ 0.85
SNX17-210ENST00000537606 SGMS1Q86VZ5 419 aa20.38■□□□□ 0.85
SNX17-210ENST00000537606 FAM217BQ9NTX9 383 aaPredicted RBP20.38■□□□□ 0.85
SNX17-210ENST00000537606 XDHP47989 1333 aa20.37■□□□□ 0.85
SNX17-210ENST00000537606 LIFRP42702 1097 aa20.37■□□□□ 0.85
SNX17-210ENST00000537606 FBXO18Q8NFZ0 1043 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms