RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 ZKSCAN4Q969J2 545 aaPredicted RBP24.48■■□□□ 1.51
TNFRSF1B-204ENST00000536782 EFCC1Q9HA90 598 aa24.48■■□□□ 1.51
TNFRSF1B-204ENST00000536782 ZFYVE28Q9HCC9 887 aa24.48■■□□□ 1.51
TNFRSF1B-204ENST00000536782 PA2G4Q9UQ80 394 aaKnown RBP24.48■■□□□ 1.51
TNFRSF1B-204ENST00000536782 PTPN22Q9Y2R2 807 aa24.48■■□□□ 1.51
TNFRSF1B-204ENST00000536782 DAGLAQ9Y4D2 1042 aa24.48■■□□□ 1.51
TNFRSF1B-204ENST00000536782 SEMA3EO15041 775 aa24.47■■□□□ 1.51
TNFRSF1B-204ENST00000536782 LDHBP07195 334 aaKnown RBP24.47■■□□□ 1.51
TNFRSF1B-204ENST00000536782 PRDX5P30044 214 aa24.47■■□□□ 1.51
TNFRSF1B-204ENST00000536782 DIXDC1Q155Q3 683 aa24.47■■□□□ 1.51
TNFRSF1B-204ENST00000536782 FAM151AQ8WW52 585 aa24.47■■□□□ 1.51
TNFRSF1B-204ENST00000536782 MEIS3Q99687 375 aa24.47■■□□□ 1.51
TNFRSF1B-204ENST00000536782 ZNF341Q9BYN7 854 aa24.47■■□□□ 1.51
TNFRSF1B-204ENST00000536782 COPRSQ9NQ92 184 aa24.47■■□□□ 1.51
TNFRSF1B-204ENST00000536782 DENND2AQ9ULE3 1009 aa24.47■■□□□ 1.51
TNFRSF1B-204ENST00000536782 SALL1Q9NSC2 1324 aa24.46■■□□□ 1.51
TNFRSF1B-204ENST00000536782 CETPP11597 493 aa24.46■■□□□ 1.51
TNFRSF1B-204ENST00000536782 INTS3Q68E01 1043 aaKnown RBP24.46■■□□□ 1.51
TNFRSF1B-204ENST00000536782 CDC42EP5Q6NZY7 148 aa24.46■■□□□ 1.51
TNFRSF1B-204ENST00000536782 FAM43AQ8N2R8 423 aa24.46■■□□□ 1.51
TNFRSF1B-204ENST00000536782 ARHGAP45Q92619 1136 aa24.46■■□□□ 1.51
TNFRSF1B-204ENST00000536782 WDHD1O75717 1129 aaPredicted RBP24.45■■□□□ 1.5
TNFRSF1B-204ENST00000536782 PHKA1P46020 1223 aa24.45■■□□□ 1.5
TNFRSF1B-204ENST00000536782 MIGA2Q7L4E1 593 aa24.45■■□□□ 1.5
TNFRSF1B-204ENST00000536782 ZSWIM8A7E2V4 1837 aa24.45■■□□□ 1.5
TNFRSF1B-204ENST00000536782 IRF6O14896 467 aa24.44■■□□□ 1.5
TNFRSF1B-204ENST00000536782 GNAI3P08754 354 aa24.44■■□□□ 1.5
TNFRSF1B-204ENST00000536782 TCP10Q12799 353 aa24.44■■□□□ 1.5
TNFRSF1B-204ENST00000536782 SNAPC2Q13487 334 aa24.44■■□□□ 1.5
TNFRSF1B-204ENST00000536782 ARHGEF6Q15052 776 aa24.44■■□□□ 1.5
TNFRSF1B-204ENST00000536782 PRPF38BQ5VTL8 546 aaKnown RBP24.44■■□□□ 1.5
TNFRSF1B-204ENST00000536782 PPIL2Q13356 520 aa24.43■■□□□ 1.5
TNFRSF1B-204ENST00000536782 CCDC102BQ68D86 513 aa24.43■■□□□ 1.5
TNFRSF1B-204ENST00000536782 USP40Q9NVE5 1235 aa24.43■■□□□ 1.5
TNFRSF1B-204ENST00000536782 ZBTB22O15209 634 aa24.42■■□□□ 1.5
TNFRSF1B-204ENST00000536782 ADORA1P30542 326 aa24.42■■□□□ 1.5
TNFRSF1B-204ENST00000536782 PPATQ06203 517 aa24.42■■□□□ 1.5
TNFRSF1B-204ENST00000536782 NFIAQ12857 509 aa24.42■■□□□ 1.5
TNFRSF1B-204ENST00000536782 ZGPATQ8N5A5 531 aaKnown RBP24.42■■□□□ 1.5
TNFRSF1B-204ENST00000536782 ZCCHC17Q9NP64 241 aaKnown RBP24.42■■□□□ 1.5
TNFRSF1B-204ENST00000536782 POTEFA5A3E0 1075 aa24.41■■□□□ 1.5
TNFRSF1B-204ENST00000536782 INPP5BP32019 993 aa24.41■■□□□ 1.5
TNFRSF1B-204ENST00000536782 AK9Q5TCS8 1911 aa24.41■■□□□ 1.5
TNFRSF1B-204ENST00000536782 BTBD19C9JJ37 291 aa24.4■■□□□ 1.5
TNFRSF1B-204ENST00000536782 SRGAP3O43295 1099 aa24.4■■□□□ 1.5
TNFRSF1B-204ENST00000536782 TIMM10P62072 90 aa24.4■■□□□ 1.5
TNFRSF1B-204ENST00000536782 FAM198AQ9UFP1 575 aa24.4■■□□□ 1.5
TNFRSF1B-204ENST00000536782 ZNF112Q9UJU3 913 aa24.4■■□□□ 1.5
TNFRSF1B-204ENST00000536782 IPO8O15397 1037 aaKnown RBP24.39■■□□□ 1.49
TNFRSF1B-204ENST00000536782 TLR2O60603 784 aa24.39■■□□□ 1.49
TNFRSF1B-204ENST00000536782 MTX1Q13505 466 aa24.39■■□□□ 1.49
TNFRSF1B-204ENST00000536782 ARMC5Q96C12 935 aa24.39■■□□□ 1.49
TNFRSF1B-204ENST00000536782 AKAP2Q9Y2D5 859 aa24.39■■□□□ 1.49
TNFRSF1B-204ENST00000536782 RASGRF1Q13972 1273 aa24.38■■□□□ 1.49
TNFRSF1B-204ENST00000536782 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.38■■□□□ 1.49
TNFRSF1B-204ENST00000536782 PDS5AQ29RF7 1337 aaKnown RBP24.37■■□□□ 1.49
TNFRSF1B-204ENST00000536782 A0A1B0GUL7 405 aa24.37■■□□□ 1.49
TNFRSF1B-204ENST00000536782 TFCP2Q12800 502 aa24.37■■□□□ 1.49
TNFRSF1B-204ENST00000536782 DZIP1Q86YF9 867 aaKnown RBP24.37■■□□□ 1.49
TNFRSF1B-204ENST00000536782 SLF2Q8IX21 1173 aa24.37■■□□□ 1.49
TNFRSF1B-204ENST00000536782 ABCF2Q9UG63 623 aa24.37■■□□□ 1.49
TNFRSF1B-204ENST00000536782 CEP290O15078 2479 aa24.36■■□□□ 1.49
TNFRSF1B-204ENST00000536782 MVPQ14764 893 aaKnown RBP24.36■■□□□ 1.49
TNFRSF1B-204ENST00000536782 KIF22Q14807 665 aa24.36■■□□□ 1.49
TNFRSF1B-204ENST00000536782 NOL9Q5SY16 702 aaKnown RBP24.36■■□□□ 1.49
TNFRSF1B-204ENST00000536782 SPTY2D1Q68D10 685 aaPredicted RBP24.36■■□□□ 1.49
TNFRSF1B-204ENST00000536782 XAGE2Q96GT9 111 aa24.36■■□□□ 1.49
TNFRSF1B-204ENST00000536782 IDI2Q9BXS1 227 aa24.36■■□□□ 1.49
TNFRSF1B-204ENST00000536782 GAKO14976 1311 aa24.35■■□□□ 1.49
TNFRSF1B-204ENST00000536782 ENTPD3O75355 529 aa24.35■■□□□ 1.49
TNFRSF1B-204ENST00000536782 TRIM27P14373 513 aa24.35■■□□□ 1.49
TNFRSF1B-204ENST00000536782 ANKRD23Q86SG2 305 aa24.35■■□□□ 1.49
TNFRSF1B-204ENST00000536782 ZFPM1Q8IX07 1006 aa24.35■■□□□ 1.49
TNFRSF1B-204ENST00000536782 FRAT1Q92837 279 aaPredicted RBP24.35■■□□□ 1.49
TNFRSF1B-204ENST00000536782 KCNH4Q9UQ05 1017 aa24.35■■□□□ 1.49
TNFRSF1B-204ENST00000536782 PTCH2Q9Y6C5 1203 aa24.35■■□□□ 1.49
TNFRSF1B-204ENST00000536782 MYH2Q9UKX2 1941 aa24.35■■□□□ 1.49
TNFRSF1B-204ENST00000536782 RGS3P49796 1198 aa24.34■■□□□ 1.49
TNFRSF1B-204ENST00000536782 LACTBP83111 547 aaPredicted RBP24.34■■□□□ 1.49
TNFRSF1B-204ENST00000536782 SLC9C1Q4G0N8 1177 aa24.34■■□□□ 1.49
TNFRSF1B-204ENST00000536782 ATF7IPQ6VMQ6 1270 aa24.34■■□□□ 1.49
TNFRSF1B-204ENST00000536782 NBPF11Q86T75 865 aa24.34■■□□□ 1.49
TNFRSF1B-204ENST00000536782 GNAI2P04899 355 aa24.33■■□□□ 1.49
TNFRSF1B-204ENST00000536782 FAM163AQ96GL9 167 aaPredicted RBP24.33■■□□□ 1.49
TNFRSF1B-204ENST00000536782 NEUROD6Q96NK8 337 aa24.33■■□□□ 1.49
TNFRSF1B-204ENST00000536782 TMEM106CQ9BVX2 250 aa24.33■■□□□ 1.49
TNFRSF1B-204ENST00000536782 PDHXO00330 501 aa24.32■■□□□ 1.48
TNFRSF1B-204ENST00000536782 BCAR3O75815 825 aa24.32■■□□□ 1.48
TNFRSF1B-204ENST00000536782 GNRH1P01148 92 aa24.32■■□□□ 1.48
TNFRSF1B-204ENST00000536782 ZSCAN29Q8IWY8 852 aaPredicted RBP24.32■■□□□ 1.48
TNFRSF1B-204ENST00000536782 ZNF333Q96JL9 665 aa24.32■■□□□ 1.48
TNFRSF1B-204ENST00000536782 ARHGAP39Q9C0H5 1083 aa24.32■■□□□ 1.48
TNFRSF1B-204ENST00000536782 BTDP43251 543 aa24.31■■□□□ 1.48
TNFRSF1B-204ENST00000536782 C17orf99Q6UX52 265 aa24.31■■□□□ 1.48
TNFRSF1B-204ENST00000536782 ERICH6Q7L0X2 663 aa24.31■■□□□ 1.48
TNFRSF1B-204ENST00000536782 CLUAP1Q96AJ1 413 aa24.31■■□□□ 1.48
TNFRSF1B-204ENST00000536782 TNNQ9UQP3 1299 aa24.31■■□□□ 1.48
TNFRSF1B-204ENST00000536782 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.31■■□□□ 1.48
TNFRSF1B-204ENST00000536782 RFX7Q2KHR2 1363 aa24.3■■□□□ 1.48
TNFRSF1B-204ENST00000536782 ATRNL1Q5VV63 1379 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms