RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 ZNF34Q8IZ26 560 aa20.75■□□□□ 0.91
RAB40C-203ENST00000535977 AKAP11Q9UKA4 1901 aa20.75■□□□□ 0.91
RAB40C-203ENST00000535977 CEBPZQ03701 1054 aaKnown RBP20.75■□□□□ 0.91
RAB40C-203ENST00000535977 ADALQ6DHV7 355 aa20.75■□□□□ 0.91
RAB40C-203ENST00000535977 FBXO18Q8NFZ0 1043 aa20.75■□□□□ 0.91
RAB40C-203ENST00000535977 FHOD1Q9Y613 1164 aa20.75■□□□□ 0.91
RAB40C-203ENST00000535977 GOLGA8BA8MQT2 603 aa20.74■□□□□ 0.91
RAB40C-203ENST00000535977 YEATS4O95619 227 aa20.74■□□□□ 0.91
RAB40C-203ENST00000535977 ALX1Q15699 326 aa20.74■□□□□ 0.91
RAB40C-203ENST00000535977 SYNE4Q8N205 404 aa20.74■□□□□ 0.91
RAB40C-203ENST00000535977 NEK11Q8NG66 645 aa20.74■□□□□ 0.91
RAB40C-203ENST00000535977 KCNG4Q8TDN1 519 aa20.74■□□□□ 0.91
RAB40C-203ENST00000535977 CDCA7Q9BWT1 371 aaPredicted RBP20.74■□□□□ 0.91
RAB40C-203ENST00000535977 ORC3Q9UBD5 711 aaPredicted RBP20.74■□□□□ 0.91
RAB40C-203ENST00000535977 ZBTB1Q9Y2K1 713 aa20.74■□□□□ 0.91
RAB40C-203ENST00000535977 ME1P48163 572 aa20.74■□□□□ 0.91
RAB40C-203ENST00000535977 PTPN14Q15678 1187 aa20.74■□□□□ 0.91
RAB40C-203ENST00000535977 ENGASEQ8NFI3 743 aa20.74■□□□□ 0.91
RAB40C-203ENST00000535977 SLC4A9Q96Q91 983 aa20.74■□□□□ 0.91
RAB40C-203ENST00000535977 HPS5Q9UPZ3 1129 aa20.74■□□□□ 0.91
RAB40C-203ENST00000535977 CDKL5O76039 1030 aa20.73■□□□□ 0.91
RAB40C-203ENST00000535977 CDC25BP30305 580 aa20.73■□□□□ 0.91
RAB40C-203ENST00000535977 CCDC102BQ68D86 513 aa20.73■□□□□ 0.91
RAB40C-203ENST00000535977 NYAP1Q6ZVC0 841 aa20.73■□□□□ 0.91
RAB40C-203ENST00000535977 CLIP2Q9UDT6 1046 aa20.73■□□□□ 0.91
RAB40C-203ENST00000535977 PLCH1Q4KWH8 1693 aa20.73■□□□□ 0.91
RAB40C-203ENST00000535977 ZMYM6O95789 1325 aa20.73■□□□□ 0.91
RAB40C-203ENST00000535977 NUP98P52948 1817 aa20.73■□□□□ 0.91
RAB40C-203ENST00000535977 GOLGA6L19H0YKK7 550 aa20.73■□□□□ 0.91
RAB40C-203ENST00000535977 SLU7O95391 586 aaKnown RBP20.73■□□□□ 0.91
RAB40C-203ENST00000535977 ANTXR2P58335 489 aa20.73■□□□□ 0.91
RAB40C-203ENST00000535977 SNW1Q13573 536 aaKnown RBP20.73■□□□□ 0.91
RAB40C-203ENST00000535977 TMEM87BQ96K49 555 aa20.73■□□□□ 0.91
RAB40C-203ENST00000535977 POLR3EQ9NVU0 708 aa20.73■□□□□ 0.91
RAB40C-203ENST00000535977 ANO10Q9NW15 660 aa20.73■□□□□ 0.91
RAB40C-203ENST00000535977 FOSBP53539 338 aa20.72■□□□□ 0.91
RAB40C-203ENST00000535977 CPLX2Q6PUV4 134 aaKnown RBP20.72■□□□□ 0.91
RAB40C-203ENST00000535977 ILDR1Q86SU0 546 aaPredicted RBP20.72■□□□□ 0.91
RAB40C-203ENST00000535977 MRPS27Q92552 414 aaKnown RBP20.72■□□□□ 0.91
RAB40C-203ENST00000535977 DNAJC25Q9H1X3 360 aa20.72■□□□□ 0.91
RAB40C-203ENST00000535977 RASSF4Q9H2L5 321 aa20.72■□□□□ 0.91
RAB40C-203ENST00000535977 ANGEL1Q9UNK9 670 aaKnown RBP20.72■□□□□ 0.91
RAB40C-203ENST00000535977 H2AFXP16104 143 aaPredicted RBP20.72■□□□□ 0.91
RAB40C-203ENST00000535977 SARM1Q6SZW1 724 aa20.72■□□□□ 0.91
RAB40C-203ENST00000535977 PI16Q6UXB8 463 aa20.72■□□□□ 0.91
RAB40C-203ENST00000535977 SLC5A1P13866 664 aa20.71■□□□□ 0.91
RAB40C-203ENST00000535977 FGFR2P21802 821 aa20.71■□□□□ 0.91
RAB40C-203ENST00000535977 FSIP1Q8NA03 581 aa20.71■□□□□ 0.91
RAB40C-203ENST00000535977 NOP2P46087 812 aaKnown RBP20.71■□□□□ 0.91
RAB40C-203ENST00000535977 PLA2G4AP47712 749 aa20.71■□□□□ 0.91
RAB40C-203ENST00000535977 SYT10Q6XYQ8 523 aa20.71■□□□□ 0.91
RAB40C-203ENST00000535977 LINC00301Q8NCQ3 95 aa20.71■□□□□ 0.91
RAB40C-203ENST00000535977 YY1AP1Q9H869 796 aa20.71■□□□□ 0.91
RAB40C-203ENST00000535977 DDX60Q8IY21 1712 aaKnown RBP20.71■□□□□ 0.91
RAB40C-203ENST00000535977 IDH1O75874 414 aaKnown RBP20.7■□□□□ 0.9
RAB40C-203ENST00000535977 GUCY1B3Q02153 619 aa20.7■□□□□ 0.9
RAB40C-203ENST00000535977 GOLPH3LQ9H4A5 285 aa20.7■□□□□ 0.9
RAB40C-203ENST00000535977 PIH1D3Q9NQM4 214 aaKnown RBP20.7■□□□□ 0.9
RAB40C-203ENST00000535977 PDE6AP16499 860 aa20.7■□□□□ 0.9
RAB40C-203ENST00000535977 ARID5BQ14865 1188 aa20.7■□□□□ 0.9
RAB40C-203ENST00000535977 SF3A1Q15459 793 aaKnown RBP20.7■□□□□ 0.9
RAB40C-203ENST00000535977 SYNE3Q6ZMZ3 975 aa20.7■□□□□ 0.9
RAB40C-203ENST00000535977 FBXO41Q8TF61 875 aa20.7■□□□□ 0.9
RAB40C-203ENST00000535977 NAT10Q9H0A0 1025 aaKnown RBP20.7■□□□□ 0.9
RAB40C-203ENST00000535977 TMX1Q9H3N1 280 aa20.7■□□□□ 0.9
RAB40C-203ENST00000535977 GPHNQ9NQX3 736 aaPredicted RBP20.7■□□□□ 0.9
RAB40C-203ENST00000535977 PCDHA7Q9UN72 937 aa20.7■□□□□ 0.9
RAB40C-203ENST00000535977 ZNF532Q9HCE3 1301 aa20.7■□□□□ 0.9
RAB40C-203ENST00000535977 IQCB1Q15051 598 aa20.69■□□□□ 0.9
RAB40C-203ENST00000535977 STK38Q15208 465 aa20.69■□□□□ 0.9
RAB40C-203ENST00000535977 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.69■□□□□ 0.9
RAB40C-203ENST00000535977 LRP5O75197 1615 aa20.69■□□□□ 0.9
RAB40C-203ENST00000535977 APPP05067 770 aa20.69■□□□□ 0.9
RAB40C-203ENST00000535977 PNMA6AP0CW24 399 aaPredicted RBP20.69■□□□□ 0.9
RAB40C-203ENST00000535977 MAP3K12Q12852 859 aa20.69■□□□□ 0.9
RAB40C-203ENST00000535977 PARP10Q53GL7 1025 aa20.69■□□□□ 0.9
RAB40C-203ENST00000535977 MUM1L1Q5H9M0 696 aa20.69■□□□□ 0.9
RAB40C-203ENST00000535977 LRRC8AQ8IWT6 810 aa20.69■□□□□ 0.9
RAB40C-203ENST00000535977 AIDAQ96BJ3 306 aa20.69■□□□□ 0.9
RAB40C-203ENST00000535977 PHKA1P46020 1223 aa20.69■□□□□ 0.9
RAB40C-203ENST00000535977 CLCN6P51797 869 aa20.69■□□□□ 0.9
RAB40C-203ENST00000535977 EIF5P55010 431 aaKnown RBP20.69■□□□□ 0.9
RAB40C-203ENST00000535977 ERCC6LQ2NKX8 1250 aa20.69■□□□□ 0.9
RAB40C-203ENST00000535977 FMR1NBQ8N0W7 255 aaPredicted RBP20.69■□□□□ 0.9
RAB40C-203ENST00000535977 FTOQ9C0B1 505 aaKnown RBP eCLIP20.69■□□□□ 0.9
RAB40C-203ENST00000535977 TCRBV5S4A2TA0A5A2 114 aa20.68■□□□□ 0.9
RAB40C-203ENST00000535977 PATL2C9JE40 543 aaKnown RBP20.68■□□□□ 0.9
RAB40C-203ENST00000535977 MYSM1Q5VVJ2 828 aa20.68■□□□□ 0.9
RAB40C-203ENST00000535977 KRBA2Q6ZNG9 492 aa20.68■□□□□ 0.9
RAB40C-203ENST00000535977 SYTL4Q96C24 671 aaPredicted RBP20.68■□□□□ 0.9
RAB40C-203ENST00000535977 STRBPQ96SI9 672 aaKnown RBP20.68■□□□□ 0.9
RAB40C-203ENST00000535977 TRMT1Q9NXH9 659 aaKnown RBP20.68■□□□□ 0.9
RAB40C-203ENST00000535977 SH2B2O14492 632 aaPredicted RBP20.68■□□□□ 0.9
RAB40C-203ENST00000535977 POLR3GO15318 223 aaPredicted RBP20.68■□□□□ 0.9
RAB40C-203ENST00000535977 UBN2Q6ZU65 1347 aa20.67■□□□□ 0.9
RAB40C-203ENST00000535977 ARAP2Q8WZ64 1704 aa20.67■□□□□ 0.9
RAB40C-203ENST00000535977 TRIM66O15016 1216 aa20.67■□□□□ 0.9
RAB40C-203ENST00000535977 SPTLC2O15270 562 aa20.67■□□□□ 0.9
RAB40C-203ENST00000535977 METAP2P50579 478 aaKnown RBP eCLIP20.67■□□□□ 0.9
RAB40C-203ENST00000535977 TXLNBQ8N3L3 684 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms