RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 ALDH1A1P00352 501 aa10.55□□□□□ -0.72
SFSWAP-202ENST00000535202 INHBEP58166 350 aa10.55□□□□□ -0.72
SFSWAP-202ENST00000535202 MAP3K9P80192 1104 aa10.55□□□□□ -0.72
SFSWAP-202ENST00000535202 G3BP1Q13283 466 aaKnown RBP eCLIP10.55□□□□□ -0.72
SFSWAP-202ENST00000535202 RASGRF1Q13972 1273 aa10.55□□□□□ -0.72
SFSWAP-202ENST00000535202 MVPQ14764 893 aaKnown RBP10.55□□□□□ -0.72
SFSWAP-202ENST00000535202 FKBP1CQ5VVH2 108 aa10.55□□□□□ -0.72
SFSWAP-202ENST00000535202 CDC42EP5Q6NZY7 148 aa10.55□□□□□ -0.72
SFSWAP-202ENST00000535202 CTU1Q7Z7A3 348 aaKnown RBP10.55□□□□□ -0.72
SFSWAP-202ENST00000535202 FAM83AQ86UY5 434 aa10.55□□□□□ -0.72
SFSWAP-202ENST00000535202 IFNL1Q8IU54 200 aa10.55□□□□□ -0.72
SFSWAP-202ENST00000535202 ITPRIPQ8IWB1 547 aa10.55□□□□□ -0.72
SFSWAP-202ENST00000535202 ZGPATQ8N5A5 531 aaKnown RBP10.55□□□□□ -0.72
SFSWAP-202ENST00000535202 R3HDMLQ9H3Y0 253 aa10.55□□□□□ -0.72
SFSWAP-202ENST00000535202 C1orf115Q9H7X2 142 aa10.55□□□□□ -0.72
SFSWAP-202ENST00000535202 ABCF2Q9UG63 623 aa10.55□□□□□ -0.72
SFSWAP-202ENST00000535202 CSADQ9Y600 493 aa10.55□□□□□ -0.72
SFSWAP-202ENST00000535202 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.55□□□□□ -0.72
SFSWAP-202ENST00000535202 RPAP1Q9BWH6 1393 aaPredicted RBP10.54□□□□□ -0.72
SFSWAP-202ENST00000535202 IGF2BP3O00425 579 aaKnown RBP eCLIP10.54□□□□□ -0.72
SFSWAP-202ENST00000535202 TCP10Q12799 353 aa10.54□□□□□ -0.72
SFSWAP-202ENST00000535202 VGLL4Q14135 290 aa10.54□□□□□ -0.72
SFSWAP-202ENST00000535202 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.54□□□□□ -0.72
SFSWAP-202ENST00000535202 DZIP1Q86YF9 867 aaKnown RBP10.54□□□□□ -0.72
SFSWAP-202ENST00000535202 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.54□□□□□ -0.72
SFSWAP-202ENST00000535202 CNKSR2Q8WXI2 1034 aa10.54□□□□□ -0.72
SFSWAP-202ENST00000535202 HOOK2Q96ED9 719 aa10.54□□□□□ -0.72
SFSWAP-202ENST00000535202 WRNIP1Q96S55 665 aa10.54□□□□□ -0.72
SFSWAP-202ENST00000535202 FKTNO75072 461 aa10.53□□□□□ -0.72
SFSWAP-202ENST00000535202 RLBP1P12271 317 aa10.53□□□□□ -0.72
SFSWAP-202ENST00000535202 NFIAQ12857 509 aa10.53□□□□□ -0.72
SFSWAP-202ENST00000535202 OS9Q13438 667 aaPredicted RBP10.53□□□□□ -0.72
SFSWAP-202ENST00000535202 NOM1Q5C9Z4 860 aaKnown RBP10.53□□□□□ -0.72
SFSWAP-202ENST00000535202 GORABQ5T7V8 394 aa10.53□□□□□ -0.72
SFSWAP-202ENST00000535202 DCAF15Q66K64 600 aa10.53□□□□□ -0.72
SFSWAP-202ENST00000535202 OTUD7BQ6GQQ9 843 aa10.53□□□□□ -0.72
SFSWAP-202ENST00000535202 MIGA2Q7L4E1 593 aa10.53□□□□□ -0.72
SFSWAP-202ENST00000535202 FAM151AQ8WW52 585 aa10.53□□□□□ -0.72
SFSWAP-202ENST00000535202 OTUD5Q96G74 571 aa10.53□□□□□ -0.72
SFSWAP-202ENST00000535202 CFHR5Q9BXR6 569 aa10.53□□□□□ -0.72
SFSWAP-202ENST00000535202 USP40Q9NVE5 1235 aa10.53□□□□□ -0.72
SFSWAP-202ENST00000535202 DOCK2Q92608 1830 aa10.53□□□□□ -0.72
SFSWAP-202ENST00000535202 PDS5AQ29RF7 1337 aaKnown RBP10.53□□□□□ -0.72
SFSWAP-202ENST00000535202 ZBTB22O15209 634 aa10.52□□□□□ -0.73
SFSWAP-202ENST00000535202 ATP8B2P98198 1209 aa10.52□□□□□ -0.73
SFSWAP-202ENST00000535202 POLA2Q14181 598 aa10.52□□□□□ -0.73
SFSWAP-202ENST00000535202 SPTY2D1Q68D10 685 aaPredicted RBP10.52□□□□□ -0.73
SFSWAP-202ENST00000535202 ZKSCAN4Q969J2 545 aaPredicted RBP10.52□□□□□ -0.73
SFSWAP-202ENST00000535202 ZNF341Q9BYN7 854 aa10.52□□□□□ -0.73
SFSWAP-202ENST00000535202 FAM198AQ9UFP1 575 aa10.52□□□□□ -0.73
SFSWAP-202ENST00000535202 SNCAIPQ9Y6H5 919 aa10.52□□□□□ -0.73
SFSWAP-202ENST00000535202 GAKO14976 1311 aa10.52□□□□□ -0.73
SFSWAP-202ENST00000535202 CCL15-CCL14A0A0B4J2E2 113 aa10.51□□□□□ -0.73
SFSWAP-202ENST00000535202 TESPA1A2RU30 521 aaPredicted RBP10.51□□□□□ -0.73
SFSWAP-202ENST00000535202 SPDYE5A6NIY4 337 aa10.51□□□□□ -0.73
SFSWAP-202ENST00000535202 ZBTB7BO15156 539 aaPredicted RBP10.51□□□□□ -0.73
SFSWAP-202ENST00000535202 SURF6O75683 361 aaKnown RBP10.51□□□□□ -0.73
SFSWAP-202ENST00000535202 BTDP43251 543 aa10.51□□□□□ -0.73
SFSWAP-202ENST00000535202 GTF2A2P52657 109 aa10.51□□□□□ -0.73
SFSWAP-202ENST00000535202 CRHR2Q13324 411 aa10.51□□□□□ -0.73
SFSWAP-202ENST00000535202 PKN2Q16513 984 aaKnown RBP10.51□□□□□ -0.73
SFSWAP-202ENST00000535202 CCL15Q16663 113 aa10.51□□□□□ -0.73
SFSWAP-202ENST00000535202 PI16Q6UXB8 463 aa10.51□□□□□ -0.73
SFSWAP-202ENST00000535202 SLF2Q8IX21 1173 aa10.51□□□□□ -0.73
SFSWAP-202ENST00000535202 SPATA5Q8NB90 893 aa10.51□□□□□ -0.73
SFSWAP-202ENST00000535202 BRI3BPQ8WY22 251 aa10.51□□□□□ -0.73
SFSWAP-202ENST00000535202 MS4A4AQ96JQ5 239 aa10.51□□□□□ -0.73
SFSWAP-202ENST00000535202 PTPN18Q99952 460 aa10.51□□□□□ -0.73
SFSWAP-202ENST00000535202 HMG20BQ9P0W2 317 aa10.51□□□□□ -0.73
SFSWAP-202ENST00000535202 HPS5Q9UPZ3 1129 aa10.51□□□□□ -0.73
SFSWAP-202ENST00000535202 MROH7-TTC4A0A0A0MT08 1334 aa10.51□□□□□ -0.73
SFSWAP-202ENST00000535202 UQCRFS1P1P0C7P4 283 aa10.5□□□□□ -0.73
SFSWAP-202ENST00000535202 ARID4AP29374 1257 aaPredicted RBP10.5□□□□□ -0.73
SFSWAP-202ENST00000535202 INPP5BP32019 993 aa10.5□□□□□ -0.73
SFSWAP-202ENST00000535202 MCAMP43121 646 aa10.5□□□□□ -0.73
SFSWAP-202ENST00000535202 RGS3P49796 1198 aa10.5□□□□□ -0.73
SFSWAP-202ENST00000535202 SOX10P56693 466 aa10.5□□□□□ -0.73
SFSWAP-202ENST00000535202 MECOMQ03112 1051 aa10.5□□□□□ -0.73
SFSWAP-202ENST00000535202 PICALMQ13492 652 aa10.5□□□□□ -0.73
SFSWAP-202ENST00000535202 TNNI3KQ59H18 835 aa10.5□□□□□ -0.73
SFSWAP-202ENST00000535202 TTC39AQ5SRH9 613 aa10.5□□□□□ -0.73
SFSWAP-202ENST00000535202 TBC1D9Q6ZT07 1266 aa10.5□□□□□ -0.73
SFSWAP-202ENST00000535202 ERO1BQ86YB8 467 aa10.5□□□□□ -0.73
SFSWAP-202ENST00000535202 ZSCAN29Q8IWY8 852 aaPredicted RBP10.5□□□□□ -0.73
SFSWAP-202ENST00000535202 ZFPM1Q8IX07 1006 aa10.5□□□□□ -0.73
SFSWAP-202ENST00000535202 PANK1Q8TE04 598 aa10.5□□□□□ -0.73
SFSWAP-202ENST00000535202 SSH3Q8TE77 659 aa10.5□□□□□ -0.73
SFSWAP-202ENST00000535202 RAI14Q9P0K7 980 aa10.5□□□□□ -0.73
SFSWAP-202ENST00000535202 FPGT-TNNI3KV9GXZ4 949 aa10.5□□□□□ -0.73
SFSWAP-202ENST00000535202 MAST2Q6P0Q8 1798 aa10.49□□□□□ -0.73
SFSWAP-202ENST00000535202 IRF6O14896 467 aa10.49□□□□□ -0.73
SFSWAP-202ENST00000535202 GSTO1P78417 241 aa10.49□□□□□ -0.73
SFSWAP-202ENST00000535202 MLLT1Q03111 559 aaPredicted RBP10.49□□□□□ -0.73
SFSWAP-202ENST00000535202 PPIL2Q13356 520 aa10.49□□□□□ -0.73
SFSWAP-202ENST00000535202 TAF1CQ15572 869 aaPredicted RBP10.49□□□□□ -0.73
SFSWAP-202ENST00000535202 FBXO46Q6PJ61 603 aaPredicted RBP10.49□□□□□ -0.73
SFSWAP-202ENST00000535202 CD99L2Q8TCZ2 262 aa10.49□□□□□ -0.73
SFSWAP-202ENST00000535202 DBNDD2Q9BQY9 259 aa10.49□□□□□ -0.73
SFSWAP-202ENST00000535202 IDI2Q9BXS1 227 aa10.49□□□□□ -0.73
SFSWAP-202ENST00000535202 GPR108Q9NPR9 543 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms