RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 ALKBH8Q96BT7 664 aaKnown RBP6.39□□□□□ -1.39
ATM-217ENST00000531957 DNAJC25Q9H1X3 360 aa6.39□□□□□ -1.39
ATM-217ENST00000531957 DCTN4Q9UJW0 460 aa6.39□□□□□ -1.39
ATM-217ENST00000531957 CYP11A1P05108 521 aa6.38□□□□□ -1.39
ATM-217ENST00000531957 ITGB5P18084 799 aa6.38□□□□□ -1.39
ATM-217ENST00000531957 CDPF1Q6NVV7 123 aa6.38□□□□□ -1.39
ATM-217ENST00000531957 C2CD4AQ8NCU7 369 aaPredicted RBP6.38□□□□□ -1.39
ATM-217ENST00000531957 FLCNQ8NFG4 579 aa6.38□□□□□ -1.39
ATM-217ENST00000531957 EZH1Q92800 747 aaPredicted RBP6.38□□□□□ -1.39
ATM-217ENST00000531957 PRKAG2Q9UGJ0 569 aa6.38□□□□□ -1.39
ATM-217ENST00000531957 IVNS1ABPQ9Y6Y0 642 aa6.38□□□□□ -1.39
ATM-217ENST00000531957 TMEM238LA0A1B0GVL6 79 aa6.37□□□□□ -1.39
ATM-217ENST00000531957 ADH5P11766 374 aa6.37□□□□□ -1.39
ATM-217ENST00000531957 SOX4Q06945 474 aaPredicted RBP6.37□□□□□ -1.39
ATM-217ENST00000531957 FAAP100Q0VG06 881 aa6.37□□□□□ -1.39
ATM-217ENST00000531957 AKAP4Q5JQC9 854 aa6.37□□□□□ -1.39
ATM-217ENST00000531957 PRPF40BQ6NWY9 871 aaKnown RBP6.37□□□□□ -1.39
ATM-217ENST00000531957 SHISA5Q8N114 240 aa6.37□□□□□ -1.39
ATM-217ENST00000531957 CORO1BQ9BR76 489 aa6.37□□□□□ -1.39
ATM-217ENST00000531957 ZFYVE1Q9HBF4 777 aa6.37□□□□□ -1.39
ATM-217ENST00000531957 PNMA6FA0A0J9YX94 578 aa6.36□□□□□ -1.39
ATM-217ENST00000531957 RAB6AP20340 208 aa6.36□□□□□ -1.39
ATM-217ENST00000531957 FCGRTP55899 365 aa6.36□□□□□ -1.39
ATM-217ENST00000531957 MAP7Q14244 749 aa6.36□□□□□ -1.39
ATM-217ENST00000531957 ZC3H12CQ9C0D7 883 aaKnown RBP6.36□□□□□ -1.39
ATM-217ENST00000531957 ACTL7BQ9Y614 415 aa6.36□□□□□ -1.39
ATM-217ENST00000531957 PDE3AQ14432 1141 aa6.35□□□□□ -1.39
ATM-217ENST00000531957 DUSP27Q5VZP5 1158 aa6.35□□□□□ -1.39
ATM-217ENST00000531957 SETDB2Q96T68 719 aa6.35□□□□□ -1.39
ATM-217ENST00000531957 KRTAP4-7Q9BYR0 210 aa6.35□□□□□ -1.39
ATM-217ENST00000531957 RAD18Q9NS91 495 aa6.35□□□□□ -1.39
ATM-217ENST00000531957 NLRP2Q9NX02 1062 aa6.35□□□□□ -1.39
ATM-217ENST00000531957 AP4E1Q9UPM8 1137 aa6.35□□□□□ -1.39
ATM-217ENST00000531957 TRAK1Q9UPV9 953 aa6.35□□□□□ -1.39
ATM-217ENST00000531957 TREHO43280 583 aa6.34□□□□□ -1.39
ATM-217ENST00000531957 C8AP07357 584 aa6.34□□□□□ -1.39
ATM-217ENST00000531957 PTPN12Q05209 780 aaKnown RBP6.34□□□□□ -1.39
ATM-217ENST00000531957 DSC3Q14574 896 aa6.34□□□□□ -1.39
ATM-217ENST00000531957 DTHD1Q6ZMT9 781 aa6.34□□□□□ -1.39
ATM-217ENST00000531957 NFXL1Q6ZNB6 911 aa6.34□□□□□ -1.39
ATM-217ENST00000531957 DYMQ7RTS9 669 aa6.34□□□□□ -1.39
ATM-217ENST00000531957 DDX54Q8TDD1 881 aaKnown RBP6.34□□□□□ -1.39
ATM-217ENST00000531957 BCO2Q9BYV7 579 aa6.34□□□□□ -1.39
ATM-217ENST00000531957 FAM105AQ9NUU6 356 aa6.34□□□□□ -1.39
ATM-217ENST00000531957 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.33□□□□□ -1.4
ATM-217ENST00000531957 BIN1O00499 593 aa6.33□□□□□ -1.4
ATM-217ENST00000531957 NFICP08651 508 aa6.33□□□□□ -1.4
ATM-217ENST00000531957 LIG1P18858 919 aa6.33□□□□□ -1.4
ATM-217ENST00000531957 ADMP35318 185 aa6.33□□□□□ -1.4
ATM-217ENST00000531957 MAPK8P45983 427 aa6.33□□□□□ -1.4
ATM-217ENST00000531957 PLCB3Q01970 1234 aa6.33□□□□□ -1.4
ATM-217ENST00000531957 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.33□□□□□ -1.4
ATM-217ENST00000531957 NXPE4Q6UWF7 544 aa6.33□□□□□ -1.4
ATM-217ENST00000531957 STK11IPQ8N1F8 1099 aa6.33□□□□□ -1.4
ATM-217ENST00000531957 WDR89Q96FK6 387 aaPredicted RBP6.33□□□□□ -1.4
ATM-217ENST00000531957 WDR18Q9BV38 432 aa6.33□□□□□ -1.4
ATM-217ENST00000531957 PAK6Q9NQU5 681 aaPredicted RBP6.33□□□□□ -1.4
ATM-217ENST00000531957 GPN3Q9UHW5 284 aaPredicted RBP6.33□□□□□ -1.4
ATM-217ENST00000531957 FAM170BA6NMN3 283 aa6.32□□□□□ -1.4
ATM-217ENST00000531957 AOC2O75106 756 aa6.32□□□□□ -1.4
ATM-217ENST00000531957 AP3B2Q13367 1082 aa6.32□□□□□ -1.4
ATM-217ENST00000531957 ENOX2Q16206 610 aaKnown RBP6.32□□□□□ -1.4
ATM-217ENST00000531957 GATA6Q92908 595 aa6.32□□□□□ -1.4
ATM-217ENST00000531957 CCDC86Q9H6F5 360 aaKnown RBP6.32□□□□□ -1.4
ATM-217ENST00000531957 LGR6Q9HBX8 967 aa6.32□□□□□ -1.4
ATM-217ENST00000531957 PPP1R9AQ9ULJ8 1098 aa6.32□□□□□ -1.4
ATM-217ENST00000531957 ASPAP45381 313 aa6.31□□□□□ -1.4
ATM-217ENST00000531957 RPS26P11Q5JNZ5 115 aaPredicted RBP6.31□□□□□ -1.4
ATM-217ENST00000531957 MISP3Q96FF7 219 aa6.31□□□□□ -1.4
ATM-217ENST00000531957 SEMA6CQ9H3T2 930 aa6.31□□□□□ -1.4
ATM-217ENST00000531957 LRRC4CQ9HCJ2 640 aa6.31□□□□□ -1.4
ATM-217ENST00000531957 WWC3Q9ULE0 1092 aa6.31□□□□□ -1.4
ATM-217ENST00000531957 SLC5A6Q9Y289 635 aa6.31□□□□□ -1.4
ATM-217ENST00000531957 AKAP2Q9Y2D5 859 aa6.31□□□□□ -1.4
ATM-217ENST00000531957 DYNC1LI2O43237 492 aaPredicted RBP6.3□□□□□ -1.4
ATM-217ENST00000531957 KCNA1Q09470 495 aa6.3□□□□□ -1.4
ATM-217ENST00000531957 ZNF765Q7L2R6 523 aa6.3□□□□□ -1.4
ATM-217ENST00000531957 STK35Q8TDR2 534 aa6.3□□□□□ -1.4
ATM-217ENST00000531957 ACSS3Q9H6R3 686 aa6.3□□□□□ -1.4
ATM-217ENST00000531957 ZC3H7BQ9UGR2 993 aaKnown RBP6.3□□□□□ -1.4
ATM-217ENST00000531957 DAGLAQ9Y4D2 1042 aa6.3□□□□□ -1.4
ATM-217ENST00000531957 TMPRSS2O15393 492 aa6.29□□□□□ -1.4
ATM-217ENST00000531957 ZNF862O60290 1169 aa6.29□□□□□ -1.4
ATM-217ENST00000531957 PAPLNO95428 1278 aa6.29□□□□□ -1.4
ATM-217ENST00000531957 GSTP1P09211 210 aaKnown RBP6.29□□□□□ -1.4
ATM-217ENST00000531957 HNRNPUQ00839 825 aaKnown RBP eCLIP6.29□□□□□ -1.4
ATM-217ENST00000531957 PLCL1Q15111 1095 aa6.29□□□□□ -1.4
ATM-217ENST00000531957 KCNB2Q92953 911 aa6.29□□□□□ -1.4
ATM-217ENST00000531957 TMEM39AQ9NV64 488 aa6.29□□□□□ -1.4
ATM-217ENST00000531957 PPP4R2Q9NY27 417 aa6.29□□□□□ -1.4
ATM-217ENST00000531957 FBXO24O75426 580 aa6.28□□□□□ -1.4
ATM-217ENST00000531957 FMR1Q06787 632 aaKnown RBP eCLIP6.28□□□□□ -1.4
ATM-217ENST00000531957 COL19A1Q14993 1142 aa6.28□□□□□ -1.4
ATM-217ENST00000531957 CYP27C1Q4G0S4 372 aa6.28□□□□□ -1.4
ATM-217ENST00000531957 PDZD3Q86UT5 571 aa6.28□□□□□ -1.4
ATM-217ENST00000531957 SULF2Q8IWU5 870 aa6.28□□□□□ -1.4
ATM-217ENST00000531957 GSX1Q9H4S2 264 aaPredicted RBP6.28□□□□□ -1.4
ATM-217ENST00000531957 PPP2R3AQ06190 1150 aa6.27□□□□□ -1.41
ATM-217ENST00000531957 TPTE2Q6XPS3 522 aa6.27□□□□□ -1.41
ATM-217ENST00000531957 ZSCAN29Q8IWY8 852 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms