RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 TMEM39BQ9GZU3 492 aa7.11□□□□□ -1.27
CTSB-216ENST00000530290 TDRD3Q9H7E2 651 aaKnown RBP7.11□□□□□ -1.27
CTSB-216ENST00000530290 CNNM1Q9NRU3 951 aa7.11□□□□□ -1.27
CTSB-216ENST00000530290 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.11□□□□□ -1.27
CTSB-216ENST00000530290 BIN2Q9UBW5 565 aaPredicted RBP7.11□□□□□ -1.27
CTSB-216ENST00000530290 ADAMTS8Q9UP79 889 aa7.11□□□□□ -1.27
CTSB-216ENST00000530290 STXBP5LQ9Y2K9 1186 aa7.11□□□□□ -1.27
CTSB-216ENST00000530290 IL16Q14005 1332 aa7.1□□□□□ -1.27
CTSB-216ENST00000530290 MROH5Q6ZUA9 1318 aa7.1□□□□□ -1.27
CTSB-216ENST00000530290 TCP10L2B9ZVM9 353 aa7.1□□□□□ -1.27
CTSB-216ENST00000530290 PDHXO00330 501 aa7.1□□□□□ -1.27
CTSB-216ENST00000530290 ELL2O00472 640 aaPredicted RBP7.1□□□□□ -1.27
CTSB-216ENST00000530290 CXCL11O14625 94 aa7.1□□□□□ -1.27
CTSB-216ENST00000530290 TAF5LO75529 589 aa7.1□□□□□ -1.27
CTSB-216ENST00000530290 BCRP11274 1271 aa7.1□□□□□ -1.27
CTSB-216ENST00000530290 FKBP5Q13451 457 aaPredicted RBP7.1□□□□□ -1.27
CTSB-216ENST00000530290 CCDC27Q2M243 656 aa7.1□□□□□ -1.27
CTSB-216ENST00000530290 TWISTNBQ3B726 338 aaPredicted RBP7.1□□□□□ -1.27
CTSB-216ENST00000530290 CAVIN4Q5BKX8 364 aa7.1□□□□□ -1.27
CTSB-216ENST00000530290 LDHAL6AQ6ZMR3 332 aa7.1□□□□□ -1.27
CTSB-216ENST00000530290 FASTKD5Q7L8L6 764 aaKnown RBP7.1□□□□□ -1.27
CTSB-216ENST00000530290 NECAB2Q7Z6G3 386 aa7.1□□□□□ -1.27
CTSB-216ENST00000530290 VPS37DQ86XT2 251 aa7.1□□□□□ -1.27
CTSB-216ENST00000530290 C8orf58Q8NAV2 365 aa7.1□□□□□ -1.27
CTSB-216ENST00000530290 CNKSR2Q8WXI2 1034 aa7.1□□□□□ -1.27
CTSB-216ENST00000530290 PAK6Q9NQU5 681 aaPredicted RBP7.1□□□□□ -1.27
CTSB-216ENST00000530290 CHMP3Q9Y3E7 222 aa7.1□□□□□ -1.27
CTSB-216ENST00000530290 PCDHAC2Q9Y5I4 1007 aa7.1□□□□□ -1.27
CTSB-216ENST00000530290 DOCK1Q14185 1865 aa7.09□□□□□ -1.27
CTSB-216ENST00000530290 MYCP01106 439 aaPredicted RBP7.09□□□□□ -1.27
CTSB-216ENST00000530290 SLC4A2P04920 1241 aa7.09□□□□□ -1.27
CTSB-216ENST00000530290 PRKCZQ05513 592 aa7.09□□□□□ -1.27
CTSB-216ENST00000530290 HHIPL2Q6UWX4 724 aa7.09□□□□□ -1.27
CTSB-216ENST00000530290 CRISPLD2Q9H0B8 497 aa7.09□□□□□ -1.27
CTSB-216ENST00000530290 CPA4Q9UI42 421 aa7.09□□□□□ -1.27
CTSB-216ENST00000530290 ZNF112Q9UJU3 913 aa7.09□□□□□ -1.27
CTSB-216ENST00000530290 PNMA3Q9UL41 463 aa7.09□□□□□ -1.27
CTSB-216ENST00000530290 AOX1Q06278 1338 aa7.08□□□□□ -1.28
CTSB-216ENST00000530290 GRM8O00222 908 aa7.08□□□□□ -1.28
CTSB-216ENST00000530290 APAF1O14727 1248 aa7.08□□□□□ -1.28
CTSB-216ENST00000530290 ADCY3O60266 1144 aa7.08□□□□□ -1.28
CTSB-216ENST00000530290 FRAT2O75474 233 aaPredicted RBP7.08□□□□□ -1.28
CTSB-216ENST00000530290 HOXD11P31277 338 aaPredicted RBP7.08□□□□□ -1.28
CTSB-216ENST00000530290 FOXO4P98177 505 aa7.08□□□□□ -1.28
CTSB-216ENST00000530290 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.08□□□□□ -1.28
CTSB-216ENST00000530290 CDAN1Q8IWY9 1227 aa7.08□□□□□ -1.28
CTSB-216ENST00000530290 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.08□□□□□ -1.28
CTSB-216ENST00000530290 FAM151AQ8WW52 585 aa7.08□□□□□ -1.28
CTSB-216ENST00000530290 ZKSCAN4Q969J2 545 aaPredicted RBP7.08□□□□□ -1.28
CTSB-216ENST00000530290 COA7Q96BR5 231 aa7.08□□□□□ -1.28
CTSB-216ENST00000530290 FAM84BQ96KN1 310 aaPredicted RBP7.08□□□□□ -1.28
CTSB-216ENST00000530290 GDF15Q99988 308 aa7.08□□□□□ -1.28
CTSB-216ENST00000530290 TBC1D2Q9BYX2 928 aa7.08□□□□□ -1.28
CTSB-216ENST00000530290 A0A0G2JLL6 359 aaPredicted RBP7.07□□□□□ -1.28
CTSB-216ENST00000530290 TNPO2O14787 897 aaKnown RBP7.07□□□□□ -1.28
CTSB-216ENST00000530290 ZBTB22O15209 634 aa7.07□□□□□ -1.28
CTSB-216ENST00000530290 ALDH1L1O75891 902 aa7.07□□□□□ -1.28
CTSB-216ENST00000530290 TFRCP02786 760 aaKnown RBP7.07□□□□□ -1.28
CTSB-216ENST00000530290 INHAP05111 366 aa7.07□□□□□ -1.28
CTSB-216ENST00000530290 CTGFP29279 349 aa7.07□□□□□ -1.28
CTSB-216ENST00000530290 PLA2G5P39877 138 aa7.07□□□□□ -1.28
CTSB-216ENST00000530290 FAM110CQ1W6H9 321 aa7.07□□□□□ -1.28
CTSB-216ENST00000530290 LMBR1LQ6UX01 489 aa7.07□□□□□ -1.28
CTSB-216ENST00000530290 PRRT2Q7Z6L0 340 aaPredicted RBP7.07□□□□□ -1.28
CTSB-216ENST00000530290 FBXO33Q7Z6M2 555 aa7.07□□□□□ -1.28
CTSB-216ENST00000530290 TDHQ8IZJ6 230 aa7.07□□□□□ -1.28
CTSB-216ENST00000530290 DEFB123Q8N688 67 aa7.07□□□□□ -1.28
CTSB-216ENST00000530290 TSPYL6Q8N831 410 aa7.07□□□□□ -1.28
CTSB-216ENST00000530290 WDR66Q8TBY9 1149 aa7.07□□□□□ -1.28
CTSB-216ENST00000530290 SMCR8Q8TEV9 937 aaPredicted RBP7.07□□□□□ -1.28
CTSB-216ENST00000530290 UNC93B1Q9H1C4 597 aa7.07□□□□□ -1.28
CTSB-216ENST00000530290 PICK1Q9NRD5 415 aa7.07□□□□□ -1.28
CTSB-216ENST00000530290 JAG2Q9Y219 1238 aa7.07□□□□□ -1.28
CTSB-216ENST00000530290 LOC285556D6RIA3 1793 aa7.07□□□□□ -1.28
CTSB-216ENST00000530290 DDX60LQ5H9U9 1706 aaKnown RBP7.07□□□□□ -1.28
CTSB-216ENST00000530290 PHIPQ8WWQ0 1821 aa7.06□□□□□ -1.28
CTSB-216ENST00000530290 MYH2Q9UKX2 1941 aa7.06□□□□□ -1.28
CTSB-216ENST00000530290 SNAP23O00161 211 aa7.06□□□□□ -1.28
CTSB-216ENST00000530290 HMGCRP04035 888 aa7.06□□□□□ -1.28
CTSB-216ENST00000530290 GYG1P46976 350 aa7.06□□□□□ -1.28
CTSB-216ENST00000530290 FLT3LGP49771 235 aa7.06□□□□□ -1.28
CTSB-216ENST00000530290 PABPC4Q13310 644 aaKnown RBP eCLIP7.06□□□□□ -1.28
CTSB-216ENST00000530290 MOGSQ13724 837 aa7.06□□□□□ -1.28
CTSB-216ENST00000530290 BEND3Q5T5X7 828 aa7.06□□□□□ -1.28
CTSB-216ENST00000530290 FAM109BQ6ICB4 259 aaPredicted RBP7.06□□□□□ -1.28
CTSB-216ENST00000530290 APOBEC3HQ6NTF7 200 aaKnown RBP7.06□□□□□ -1.28
CTSB-216ENST00000530290 Q7L0L9 218 aa7.06□□□□□ -1.28
CTSB-216ENST00000530290 DEFB118Q96PH6 123 aa7.06□□□□□ -1.28
CTSB-216ENST00000530290 NBPF3Q9H094 633 aa7.06□□□□□ -1.28
CTSB-216ENST00000530290 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.06□□□□□ -1.281e-7■□□□□ 10.2
CTSB-216ENST00000530290 SPINK5Q9NQ38 1064 aaPredicted RBP7.06□□□□□ -1.28
CTSB-216ENST00000530290 C9orf78Q9NZ63 289 aaPredicted RBP7.06□□□□□ -1.28
CTSB-216ENST00000530290 COL2A1P02458 1487 aaPredicted RBP7.05□□□□□ -1.28
CTSB-216ENST00000530290 PLIN1O60240 522 aa7.05□□□□□ -1.28
CTSB-216ENST00000530290 IFIT1P09914 478 aaKnown RBP7.05□□□□□ -1.28
CTSB-216ENST00000530290 INPP5BP32019 993 aa7.05□□□□□ -1.28
CTSB-216ENST00000530290 ZEB1P37275 1124 aaPredicted RBP7.05□□□□□ -1.28
CTSB-216ENST00000530290 GCLCP48506 637 aaPredicted RBP7.05□□□□□ -1.28
CTSB-216ENST00000530290 CHAF1AQ13111 956 aaPredicted RBP7.05□□□□□ -1.28
CTSB-216ENST00000530290 PUM3Q15397 648 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms