RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 CHAMP1Q96JM3 812 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 VWA3AA6NCI4 1184 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 ALDH3A1P30838 453 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 DPH6Q7L8W6 267 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 GAS2L3Q86XJ1 694 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 CABP5Q9NP86 173 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 TMOD3Q9NYL9 352 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 TMOD2Q9NZR1 351 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 ELP1O95163 1332 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 DMTNQ08495 405 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 TTC19Q6DKK2 380 aaPredicted RBP8.57□□□□□ -1.04
CTNND1-223ENST00000529986 CEP120Q8N960 986 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 SLF1Q9BQI6 1058 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 KRT23Q9C075 422 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 TTC21AQ8NDW8 1320 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 ATP1A2P50993 1020 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 TBC1D8BQ0IIM8 1120 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 ZNF174Q15697 407 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 DCAF17Q5H9S7 520 aaPredicted RBP8.57□□□□□ -1.04
CTNND1-223ENST00000529986 CFAP157Q5JU67 520 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 TSGA10Q9BZW7 698 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 NCOA5Q9HCD5 579 aaKnown RBP8.57□□□□□ -1.04
CTNND1-223ENST00000529986 ZRANB1Q9UGI0 708 aa8.57□□□□□ -1.04
CTNND1-223ENST00000529986 NAPAP54920 295 aa8.56□□□□□ -1.04
CTNND1-223ENST00000529986 GNGT1P63211 74 aa8.56□□□□□ -1.04
CTNND1-223ENST00000529986 BEND3Q5T5X7 828 aa8.56□□□□□ -1.04
CTNND1-223ENST00000529986 SLC9C2Q5TAH2 1124 aa8.56□□□□□ -1.04
CTNND1-223ENST00000529986 CYP26C1Q6V0L0 522 aa8.56□□□□□ -1.04
CTNND1-223ENST00000529986 KSR1Q8IVT5 923 aa8.56□□□□□ -1.04
CTNND1-223ENST00000529986 CCDC26Q8TAB7 109 aa8.56□□□□□ -1.04
CTNND1-223ENST00000529986 NOC4LQ9BVI4 516 aaKnown RBP8.56□□□□□ -1.04
CTNND1-223ENST00000529986 MKRN1Q9UHC7 482 aaKnown RBP8.56□□□□□ -1.04
CTNND1-223ENST00000529986 TTF2Q9UNY4 1162 aaKnown RBP8.56□□□□□ -1.04
CTNND1-223ENST00000529986 BICDL2A1A5D9 508 aa8.56□□□□□ -1.04
CTNND1-223ENST00000529986 KIF3CO14782 793 aa8.56□□□□□ -1.04
CTNND1-223ENST00000529986 CYP7A1P22680 504 aa8.56□□□□□ -1.04
CTNND1-223ENST00000529986 TSNAXIP1Q2TAA8 658 aa8.56□□□□□ -1.04
CTNND1-223ENST00000529986 MGARPQ8TDB4 240 aa8.56□□□□□ -1.04
CTNND1-223ENST00000529986 ZKSCAN3Q9BRR0 538 aa8.56□□□□□ -1.04
CTNND1-223ENST00000529986 RBM28Q9NW13 759 aaKnown RBP8.56□□□□□ -1.04
CTNND1-223ENST00000529986 PIK3C2GO75747 1445 aa8.56□□□□□ -1.04
CTNND1-223ENST00000529986 COL17A1Q9UMD9 1497 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-223ENST00000529986 ADKP55263 362 aaKnown RBP8.56□□□□□ -1.04
CTNND1-223ENST00000529986 CCDC38Q502W7 563 aa8.56□□□□□ -1.04
CTNND1-223ENST00000529986 WDR78Q5VTH9 848 aa8.56□□□□□ -1.04
CTNND1-223ENST00000529986 LEO1Q8WVC0 666 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-223ENST00000529986 MCUR1Q96AQ8 359 aa8.56□□□□□ -1.04
CTNND1-223ENST00000529986 SWAP70Q9UH65 585 aa8.56□□□□□ -1.04
CTNND1-223ENST00000529986 RIPOR2Q9Y4F9 1068 aa8.56□□□□□ -1.04
CTNND1-223ENST00000529986 HSPA1LP34931 641 aa8.56□□□□□ -1.04
CTNND1-223ENST00000529986 KRT2P35908 639 aa8.56□□□□□ -1.04
CTNND1-223ENST00000529986 ATP6V1AP38606 617 aa8.56□□□□□ -1.04
CTNND1-223ENST00000529986 DHX32Q7L7V1 743 aaKnown RBP8.56□□□□□ -1.04
CTNND1-223ENST00000529986 CCDC170Q8IYT3 715 aa8.56□□□□□ -1.04
CTNND1-223ENST00000529986 ESR2Q92731 530 aa8.56□□□□□ -1.04
CTNND1-223ENST00000529986 DDX21Q9NR30 783 aaKnown RBP eCLIP8.56□□□□□ -1.044e-6■□□□□ 11.2
CTNND1-223ENST00000529986 POLR3AO14802 1390 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-223ENST00000529986 ZNF500O60304 480 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-223ENST00000529986 TSPY3P0CV98 308 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 TSPY8P0CW00 308 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 BRAPQ7Z569 592 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 IFT20Q8IY31 132 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 TRMT44Q8IYL2 757 aaKnown RBP8.55□□□□□ -1.04
CTNND1-223ENST00000529986 FERMT1Q9BQL6 677 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 PAG1Q9NWQ8 432 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 GUCY2FP51841 1108 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 AMOTQ4VCS5 1084 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 RPAINQ86UA6 219 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 DESI2Q9BSY9 194 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 FMNL3Q8IVF7 1028 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 SECISBP2LQ93073 1101 aaKnown RBP8.55□□□□□ -1.04
CTNND1-223ENST00000529986 XPO4Q9C0E2 1151 aaKnown RBP8.55□□□□□ -1.04
CTNND1-223ENST00000529986 TAB2Q9NYJ8 693 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 NDC80O14777 642 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 CALM1P0DP23 149 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 CALM2P0DP24 149 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 CALM3P0DP25 149 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 LRCH2Q5VUJ6 765 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 LMBR1LQ6UX01 489 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 CDC37L1Q7L3B6 337 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 IQUBQ8NA54 791 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 ERMNQ8TAM6 284 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 KIAA1524Q8TCG1 905 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 ZNF219Q9P2Y4 722 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-223ENST00000529986 MTUS1Q9ULD2 1270 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 TPX2Q9ULW0 747 aaKnown RBP8.55□□□□□ -1.04
CTNND1-223ENST00000529986 TNRQ92752 1358 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 POLR2DO15514 142 aaKnown RBP8.55□□□□□ -1.04
CTNND1-223ENST00000529986 RPSAP08865 295 aaKnown RBP8.55□□□□□ -1.04
CTNND1-223ENST00000529986 SEL1L2Q5TEA6 688 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 GBP7Q8N8V2 638 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-223ENST00000529986 KCNH3Q9ULD8 1083 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 PYCARDQ9ULZ3 195 aa8.55□□□□□ -1.04
CTNND1-223ENST00000529986 CEP104O60308 925 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 GIGYF1O75420 1035 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-223ENST00000529986 SEC31AO94979 1220 aaKnown RBP8.54□□□□□ -1.04
CTNND1-223ENST00000529986 ZNF853P0CG23 659 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 ZNF354CQ86Y25 554 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 TBC1D31Q96DN5 1066 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 DNAI2Q9GZS0 605 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 1172.4 ms