RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 PTPRCP08575 1304 aa13.75□□□□□ -0.21
NEDD8-204ENST00000526430 FAM205AQ6ZU69 1335 aa13.75□□□□□ -0.21
NEDD8-204ENST00000526430 FMNL1O95466 1100 aaPredicted RBP13.75□□□□□ -0.21
NEDD8-204ENST00000526430 FAM109BQ6ICB4 259 aaPredicted RBP13.75□□□□□ -0.21
NEDD8-204ENST00000526430 C15orf52Q6ZUT6 534 aaKnown RBP13.75□□□□□ -0.21
NEDD8-204ENST00000526430 CRISPLD2Q9H0B8 497 aa13.75□□□□□ -0.21
NEDD8-204ENST00000526430 GREM2Q9H772 168 aa13.75□□□□□ -0.21
NEDD8-204ENST00000526430 SNCAIPQ9Y6H5 919 aa13.75□□□□□ -0.21
NEDD8-204ENST00000526430 AK9Q5TCS8 1911 aa13.74□□□□□ -0.21
NEDD8-204ENST00000526430 NEURL1BA8MQ27 555 aa13.74□□□□□ -0.21
NEDD8-204ENST00000526430 IRF6O14896 467 aa13.74□□□□□ -0.21
NEDD8-204ENST00000526430 DDX58O95786 925 aaKnown RBP13.74□□□□□ -0.21
NEDD8-204ENST00000526430 RLBP1P12271 317 aa13.74□□□□□ -0.21
NEDD8-204ENST00000526430 TRIM27P14373 513 aa13.74□□□□□ -0.21
NEDD8-204ENST00000526430 CASP7P55210 303 aa13.74□□□□□ -0.21
NEDD8-204ENST00000526430 PRKCZQ05513 592 aa13.74□□□□□ -0.21
NEDD8-204ENST00000526430 PPIL2Q13356 520 aa13.74□□□□□ -0.21
NEDD8-204ENST00000526430 PAK6Q9NQU5 681 aaPredicted RBP13.74□□□□□ -0.21
NEDD8-204ENST00000526430 ZNF70Q9UC06 446 aaPredicted RBP13.74□□□□□ -0.21
NEDD8-204ENST00000526430 CPA4Q9UI42 421 aa13.74□□□□□ -0.21
NEDD8-204ENST00000526430 H7C1W4 665 aa13.73□□□□□ -0.21
NEDD8-204ENST00000526430 TFRCP02786 760 aaKnown RBP13.73□□□□□ -0.21
NEDD8-204ENST00000526430 IL1R1P14778 569 aa13.73□□□□□ -0.21
NEDD8-204ENST00000526430 IGHMBP2P38935 993 aaKnown RBP13.73□□□□□ -0.21
NEDD8-204ENST00000526430 NECAB2Q7Z6G3 386 aa13.73□□□□□ -0.21
NEDD8-204ENST00000526430 ANKRD23Q86SG2 305 aa13.73□□□□□ -0.21
NEDD8-204ENST00000526430 CDAN1Q8IWY9 1227 aa13.73□□□□□ -0.21
NEDD8-204ENST00000526430 LINS1Q8NG48 757 aa13.73□□□□□ -0.21
NEDD8-204ENST00000526430 PXYLP1Q8TE99 480 aa13.73□□□□□ -0.21
NEDD8-204ENST00000526430 JARID2Q92833 1246 aaPredicted RBP13.73□□□□□ -0.21
NEDD8-204ENST00000526430 PAWRQ96IZ0 340 aaKnown RBP13.73□□□□□ -0.21
NEDD8-204ENST00000526430 NCOR1O75376 2440 aa13.73□□□□□ -0.21
NEDD8-204ENST00000526430 F8W031 263 aaPredicted RBP13.72□□□□□ -0.21
NEDD8-204ENST00000526430 PLIN1O60240 522 aa13.72□□□□□ -0.21
NEDD8-204ENST00000526430 MAGEA10P43363 369 aaPredicted RBP13.72□□□□□ -0.21
NEDD8-204ENST00000526430 TNNI2P48788 182 aa13.72□□□□□ -0.21
NEDD8-204ENST00000526430 FCGRTP55899 365 aa13.72□□□□□ -0.21
NEDD8-204ENST00000526430 ATF7IPQ6VMQ6 1270 aa13.72□□□□□ -0.21
NEDD8-204ENST00000526430 C7orf61Q8IZ16 206 aa13.72□□□□□ -0.21
NEDD8-204ENST00000526430 ANKLE1Q8NAG6 615 aa13.72□□□□□ -0.21
NEDD8-204ENST00000526430 GUCD1Q96NT3 240 aa13.72□□□□□ -0.21
NEDD8-204ENST00000526430 SERPINA10Q9UK55 444 aa13.72□□□□□ -0.21
NEDD8-204ENST00000526430 POTEB2H3BUK9 544 aa13.71□□□□□ -0.21
NEDD8-204ENST00000526430 ADCY3O60266 1144 aa13.71□□□□□ -0.21
NEDD8-204ENST00000526430 KCNJ4P48050 445 aa13.71□□□□□ -0.21
NEDD8-204ENST00000526430 RBM5P52756 815 aaKnown RBP eCLIP13.71□□□□□ -0.21
NEDD8-204ENST00000526430 GCKRQ14397 625 aa13.71□□□□□ -0.21
NEDD8-204ENST00000526430 ZKSCAN2Q63HK3 967 aa13.71□□□□□ -0.21
NEDD8-204ENST00000526430 FRAT1Q92837 279 aaPredicted RBP13.71□□□□□ -0.21
NEDD8-204ENST00000526430 DEFB118Q96PH6 123 aa13.71□□□□□ -0.21
NEDD8-204ENST00000526430 TMEM39BQ9GZU3 492 aa13.71□□□□□ -0.21
NEDD8-204ENST00000526430 KIF16BQ96L93 1317 aa13.7□□□□□ -0.22
NEDD8-204ENST00000526430 PDHXO00330 501 aa13.7□□□□□ -0.22
NEDD8-204ENST00000526430 ECM2O94769 699 aaPredicted RBP13.7□□□□□ -0.22
NEDD8-204ENST00000526430 INHAP05111 366 aa13.7□□□□□ -0.22
NEDD8-204ENST00000526430 BCRP11274 1271 aa13.7□□□□□ -0.22
NEDD8-204ENST00000526430 PPATQ06203 517 aa13.7□□□□□ -0.22
NEDD8-204ENST00000526430 IRF5Q13568 498 aa13.7□□□□□ -0.22
NEDD8-204ENST00000526430 C20orf194Q5TEA3 1177 aa13.7□□□□□ -0.22
NEDD8-204ENST00000526430 ZNF804AQ7Z570 1209 aa13.7□□□□□ -0.22
NEDD8-204ENST00000526430 KAZALD1Q96I82 304 aa13.7□□□□□ -0.22
NEDD8-204ENST00000526430 API5Q9BZZ5 524 aaKnown RBP13.7□□□□□ -0.22
NEDD8-204ENST00000526430 UBE2OQ9C0C9 1292 aaKnown RBP13.7□□□□□ -0.22
NEDD8-204ENST00000526430 USP44Q9H0E7 712 aa13.7□□□□□ -0.22
NEDD8-204ENST00000526430 TDRD3Q9H7E2 651 aaKnown RBP13.7□□□□□ -0.22
NEDD8-204ENST00000526430 ZMYND8Q9ULU4 1186 aaPredicted RBP13.7□□□□□ -0.22
NEDD8-204ENST00000526430 UTYO14607 1347 aa13.69□□□□□ -0.22
NEDD8-204ENST00000526430 ALDH1L1O75891 902 aa13.69□□□□□ -0.22
NEDD8-204ENST00000526430 COL9A1P20849 921 aa13.69□□□□□ -0.22
NEDD8-204ENST00000526430 CHRNDQ07001 517 aa13.69□□□□□ -0.22
NEDD8-204ENST00000526430 SLC4A10Q6U841 1118 aa13.69□□□□□ -0.22
NEDD8-204ENST00000526430 DIS3LQ8TF46 1054 aaKnown RBP13.69□□□□□ -0.22
NEDD8-204ENST00000526430 CLUAP1Q96AJ1 413 aa13.69□□□□□ -0.22
NEDD8-204ENST00000526430 WRNIP1Q96S55 665 aa13.69□□□□□ -0.22
NEDD8-204ENST00000526430 MPHOSPH8Q99549 860 aa13.69□□□□□ -0.22
NEDD8-204ENST00000526430 GABRQQ9UN88 632 aa13.69□□□□□ -0.22
NEDD8-204ENST00000526430 IPO8O15397 1037 aaKnown RBP13.68□□□□□ -0.22
NEDD8-204ENST00000526430 NBPF7P0C2Y1 421 aaPredicted RBP13.68□□□□□ -0.22
NEDD8-204ENST00000526430 DZIP1LQ8IYY4 767 aaKnown RBP13.68□□□□□ -0.22
NEDD8-204ENST00000526430 TMEM57Q8N5G2 664 aa13.68□□□□□ -0.22
NEDD8-204ENST00000526430 SYMPKQ92797 1274 aaKnown RBP13.68□□□□□ -0.22
NEDD8-204ENST00000526430 ZKSCAN4Q969J2 545 aaPredicted RBP13.68□□□□□ -0.22
NEDD8-204ENST00000526430 HOOK2Q96ED9 719 aa13.68□□□□□ -0.22
NEDD8-204ENST00000526430 PARK7Q99497 189 aaKnown RBP13.68□□□□□ -0.22
NEDD8-204ENST00000526430 SRCIN1Q9C0H9 1055 aa13.68□□□□□ -0.22
NEDD8-204ENST00000526430 KCNH4Q9UQ05 1017 aa13.68□□□□□ -0.22
NEDD8-204ENST00000526430 FRMPD3Q5JV73 1810 aa13.68□□□□□ -0.22
NEDD8-204ENST00000526430 RPAP1Q9BWH6 1393 aaPredicted RBP13.68□□□□□ -0.22
NEDD8-204ENST00000526430 MAST2Q6P0Q8 1798 aa13.68□□□□□ -0.22
NEDD8-204ENST00000526430 CDH23Q9H251 3354 aa13.68□□□□□ -0.22
NEDD8-204ENST00000526430 PHIPQ8WWQ0 1821 aa13.67□□□□□ -0.22
NEDD8-204ENST00000526430 MYH13Q9UKX3 1938 aa13.67□□□□□ -0.22
NEDD8-204ENST00000526430 TCP10L2B9ZVM9 353 aa13.67□□□□□ -0.22
NEDD8-204ENST00000526430 ELNP15502 786 aa13.67□□□□□ -0.22
NEDD8-204ENST00000526430 ITGA6P23229 1130 aa13.67□□□□□ -0.22
NEDD8-204ENST00000526430 FLT3LGP49771 235 aa13.67□□□□□ -0.22
NEDD8-204ENST00000526430 NEXNQ0ZGT2 675 aa13.67□□□□□ -0.22
NEDD8-204ENST00000526430 MOGSQ13724 837 aa13.67□□□□□ -0.22
NEDD8-204ENST00000526430 EPHA10Q5JZY3 1008 aa13.67□□□□□ -0.22
NEDD8-204ENST00000526430 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms