RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 LMNB1P20700 586 aa26.3■■□□□ 1.8
NKX6-3-202ENST00000524115 PDIA3P30101 505 aaKnown RBP26.3■■□□□ 1.8
NKX6-3-202ENST00000524115 RCOR1Q9UKL0 485 aa26.3■■□□□ 1.8
NKX6-3-202ENST00000524115 SALL1Q9NSC2 1324 aa26.3■■□□□ 1.8
NKX6-3-202ENST00000524115 LIG1P18858 919 aa26.29■■□□□ 1.8
NKX6-3-202ENST00000524115 TYRO3Q06418 890 aa26.29■■□□□ 1.8
NKX6-3-202ENST00000524115 NCOA7Q8NI08 942 aa26.29■■□□□ 1.8
NKX6-3-202ENST00000524115 DDX11Q96FC9 970 aa26.29■■□□□ 1.8
NKX6-3-202ENST00000524115 UTP14AQ9BVJ6 771 aaKnown RBP26.29■■□□□ 1.8
NKX6-3-202ENST00000524115 DACT1Q9NYF0 836 aa26.29■■□□□ 1.8
NKX6-3-202ENST00000524115 TFIP11Q9UBB9 837 aaKnown RBP26.29■■□□□ 1.8
NKX6-3-202ENST00000524115 RIC1Q4ADV7 1423 aa26.29■■□□□ 1.8
NKX6-3-202ENST00000524115 DLEC1Q9Y238 1755 aa26.29■■□□□ 1.8
NKX6-3-202ENST00000524115 ITGA6P23229 1130 aa26.28■■□□□ 1.8
NKX6-3-202ENST00000524115 ADORA1P30542 326 aa26.28■■□□□ 1.8
NKX6-3-202ENST00000524115 CRY2Q49AN0 593 aa26.28■■□□□ 1.8
NKX6-3-202ENST00000524115 C7orf43Q8WVR3 580 aa26.28■■□□□ 1.8
NKX6-3-202ENST00000524115 CNNM1Q9NRU3 951 aa26.28■■□□□ 1.8
NKX6-3-202ENST00000524115 IRS4O14654 1257 aaPredicted RBP26.28■■□□□ 1.8
NKX6-3-202ENST00000524115 FAM173BQ6P4H8 233 aa26.28■■□□□ 1.8
NKX6-3-202ENST00000524115 SASS6Q6UVJ0 657 aa26.28■■□□□ 1.8
NKX6-3-202ENST00000524115 LRRC2Q9BYS8 371 aa26.28■■□□□ 1.8
NKX6-3-202ENST00000524115 COL11A2P13942 1736 aaPredicted RBP26.27■■□□□ 1.8
NKX6-3-202ENST00000524115 ALDH1B1P30837 517 aa26.27■■□□□ 1.8
NKX6-3-202ENST00000524115 ZAP70P43403 619 aa26.27■■□□□ 1.8
NKX6-3-202ENST00000524115 UBE3CQ15386 1083 aa26.27■■□□□ 1.8
NKX6-3-202ENST00000524115 RALYLQ86SE5 291 aaKnown RBP26.27■■□□□ 1.8
NKX6-3-202ENST00000524115 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.27■■□□□ 1.8
NKX6-3-202ENST00000524115 MROH5Q6ZUA9 1318 aa26.27■■□□□ 1.8
NKX6-3-202ENST00000524115 ZNF213O14771 459 aa26.26■■□□□ 1.79
NKX6-3-202ENST00000524115 CTDNEP1O95476 244 aa26.26■■□□□ 1.79
NKX6-3-202ENST00000524115 TPRNQ4KMQ1 711 aa26.26■■□□□ 1.79
NKX6-3-202ENST00000524115 SOGA3Q5TF21 947 aa26.26■■□□□ 1.79
NKX6-3-202ENST00000524115 TRMT112Q9UI30 125 aaKnown RBP26.25■■□□□ 1.79
NKX6-3-202ENST00000524115 SLC10A5Q5PT55 438 aa26.25■■□□□ 1.79
NKX6-3-202ENST00000524115 MRVI1Q9Y6F6 885 aa26.25■■□□□ 1.79
NKX6-3-202ENST00000524115 NUP98P52948 1817 aa26.24■■□□□ 1.79
NKX6-3-202ENST00000524115 PDE8BO95263 885 aa26.24■■□□□ 1.79
NKX6-3-202ENST00000524115 FGAP02671 866 aa26.24■■□□□ 1.79
NKX6-3-202ENST00000524115 ADD2P35612 726 aa26.24■■□□□ 1.79
NKX6-3-202ENST00000524115 TRDNQ13061 729 aa26.24■■□□□ 1.79
NKX6-3-202ENST00000524115 MB21D2Q8IYB1 491 aaPredicted RBP26.24■■□□□ 1.79
NKX6-3-202ENST00000524115 PGBD1Q96JS3 809 aa26.24■■□□□ 1.79
NKX6-3-202ENST00000524115 KIF3CO14782 793 aa26.23■■□□□ 1.79
NKX6-3-202ENST00000524115 GPAA1O43292 621 aa26.23■■□□□ 1.79
NKX6-3-202ENST00000524115 ARID4AP29374 1257 aaPredicted RBP26.23■■□□□ 1.79
NKX6-3-202ENST00000524115 HOXA10P31260 410 aaPredicted RBP26.23■■□□□ 1.79
NKX6-3-202ENST00000524115 C3orf67Q6ZVT6 689 aa26.23■■□□□ 1.79
NKX6-3-202ENST00000524115 PIBF1Q8WXW3 757 aa26.23■■□□□ 1.79
NKX6-3-202ENST00000524115 RPGRQ92834 1020 aaKnown RBP26.23■■□□□ 1.79
NKX6-3-202ENST00000524115 TAOK3Q9H2K8 898 aa26.23■■□□□ 1.79
NKX6-3-202ENST00000524115 GREM2Q9H772 168 aa26.23■■□□□ 1.79
NKX6-3-202ENST00000524115 MYH3P11055 1940 aa26.23■■□□□ 1.79
NKX6-3-202ENST00000524115 PRC1O43663 620 aa26.22■■□□□ 1.79
NKX6-3-202ENST00000524115 ADD1P35611 737 aaKnown RBP26.22■■□□□ 1.79
NKX6-3-202ENST00000524115 CCDC73Q6ZRK6 1079 aa26.22■■□□□ 1.79
NKX6-3-202ENST00000524115 VGLL2Q8N8G2 317 aa26.22■■□□□ 1.79
NKX6-3-202ENST00000524115 NLRP3Q96P20 1036 aa26.22■■□□□ 1.79
NKX6-3-202ENST00000524115 LTBP3Q9NS15 1303 aa26.22■■□□□ 1.79
NKX6-3-202ENST00000524115 MYH7P12883 1935 aa26.22■■□□□ 1.79
NKX6-3-202ENST00000524115 DTNBO60941 627 aa26.22■■□□□ 1.79
NKX6-3-202ENST00000524115 CCT2P78371 535 aaKnown RBP26.22■■□□□ 1.79
NKX6-3-202ENST00000524115 PUM3Q15397 648 aaKnown RBP26.22■■□□□ 1.79
NKX6-3-202ENST00000524115 SLFNL1Q499Z3 407 aa26.22■■□□□ 1.79
NKX6-3-202ENST00000524115 CCDC93Q567U6 631 aa26.22■■□□□ 1.79
NKX6-3-202ENST00000524115 LPIN2Q92539 896 aa26.22■■□□□ 1.79
NKX6-3-202ENST00000524115 NMRK2Q9NPI5 230 aa26.22■■□□□ 1.79
NKX6-3-202ENST00000524115 NAP1L2Q9ULW6 460 aaPredicted RBP26.22■■□□□ 1.79
NKX6-3-202ENST00000524115 MYH15Q9Y2K3 1946 aa26.21■■□□□ 1.79
NKX6-3-202ENST00000524115 TTLL5Q6EMB2 1281 aa26.21■■□□□ 1.79
NKX6-3-202ENST00000524115 OLFM4Q6UX06 510 aa26.21■■□□□ 1.79
NKX6-3-202ENST00000524115 BRAPQ7Z569 592 aa26.21■■□□□ 1.79
NKX6-3-202ENST00000524115 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.21■■□□□ 1.79
NKX6-3-202ENST00000524115 SYNE4Q8N205 404 aa26.21■■□□□ 1.79
NKX6-3-202ENST00000524115 ZMYM6O95789 1325 aa26.21■■□□□ 1.79
NKX6-3-202ENST00000524115 ZC3H4Q9UPT8 1303 aaKnown RBP26.21■■□□□ 1.79
NKX6-3-202ENST00000524115 SCARF1Q14162 830 aa26.2■■□□□ 1.78
NKX6-3-202ENST00000524115 CDKL5O76039 1030 aa26.19■■□□□ 1.78
NKX6-3-202ENST00000524115 MCAMP43121 646 aa26.19■■□□□ 1.78
NKX6-3-202ENST00000524115 ALX1Q15699 326 aa26.19■■□□□ 1.78
NKX6-3-202ENST00000524115 CAMK4Q16566 473 aa26.19■■□□□ 1.78
NKX6-3-202ENST00000524115 TDRD7Q8NHU6 1098 aaKnown RBP26.19■■□□□ 1.78
NKX6-3-202ENST00000524115 RBM17Q96I25 401 aaKnown RBP26.19■■□□□ 1.78
NKX6-3-202ENST00000524115 CCDC85AQ96PX6 553 aaPredicted RBP26.19■■□□□ 1.78
NKX6-3-202ENST00000524115 PUS7LQ9H0K6 701 aaKnown RBP26.19■■□□□ 1.78
NKX6-3-202ENST00000524115 SLX4Q8IY92 1834 aa26.19■■□□□ 1.78
NKX6-3-202ENST00000524115 FOXP2O15409 715 aa26.19■■□□□ 1.78
NKX6-3-202ENST00000524115 NR1I2O75469 434 aa26.19■■□□□ 1.78
NKX6-3-202ENST00000524115 CRAMP1Q96RY5 1269 aa26.19■■□□□ 1.78
NKX6-3-202ENST00000524115 RTEL1Q9NZ71 1219 aa26.19■■□□□ 1.78
NKX6-3-202ENST00000524115 CPLX1O14810 134 aa26.18■■□□□ 1.78
NKX6-3-202ENST00000524115 SLC5A1P13866 664 aa26.18■■□□□ 1.78
NKX6-3-202ENST00000524115 CPLX2Q6PUV4 134 aaKnown RBP26.18■■□□□ 1.78
NKX6-3-202ENST00000524115 CCAR1Q8IX12 1150 aaKnown RBP26.18■■□□□ 1.78
NKX6-3-202ENST00000524115 KLF18A0A0U1RQI7 1052 aa26.17■■□□□ 1.78
NKX6-3-202ENST00000524115 A0A1W2PQ27 194 aa26.17■■□□□ 1.78
NKX6-3-202ENST00000524115 A0A1W2PQ64 194 aa26.17■■□□□ 1.78
NKX6-3-202ENST00000524115 A0A1W2PQD8 194 aa26.17■■□□□ 1.78
NKX6-3-202ENST00000524115 ANO6Q4KMQ2 910 aa26.17■■□□□ 1.78
NKX6-3-202ENST00000524115 SLC9C2Q5TAH2 1124 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms