RNA–Protein interactions for RNA: ENST00000521569.1

SPARC-204, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 602 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-204ENST00000521569 WRNIP1Q96S55 665 aa10.7□□□□□ -0.7
SPARC-204ENST00000521569 USP44Q9H0E7 712 aa10.7□□□□□ -0.7
SPARC-204ENST00000521569 RANBP2P49792 3224 aaKnown RBP10.7□□□□□ -0.7
SPARC-204ENST00000521569 SPEF2Q9C093 1822 aa10.7□□□□□ -0.7
SPARC-204ENST00000521569 SALL1Q9NSC2 1324 aa10.69□□□□□ -0.7
SPARC-204ENST00000521569 CXCL11O14625 94 aa10.69□□□□□ -0.7
SPARC-204ENST00000521569 HOXD10P28358 340 aa10.69□□□□□ -0.7
SPARC-204ENST00000521569 RFX5P48382 616 aaPredicted RBP10.69□□□□□ -0.7
SPARC-204ENST00000521569 MOGSQ13724 837 aa10.69□□□□□ -0.7
SPARC-204ENST00000521569 NKX2-3Q8TAU0 364 aa10.69□□□□□ -0.7
SPARC-204ENST00000521569 ZNF341Q9BYN7 854 aa10.69□□□□□ -0.7
SPARC-204ENST00000521569 SRRDQ9UH36 339 aa10.69□□□□□ -0.7
SPARC-204ENST00000521569 EYA2O00167 538 aa10.68□□□□□ -0.7
SPARC-204ENST00000521569 SEMA3EO15041 775 aa10.68□□□□□ -0.7
SPARC-204ENST00000521569 ANP32CO43423 234 aa10.68□□□□□ -0.7
SPARC-204ENST00000521569 FRAT2O75474 233 aaPredicted RBP10.68□□□□□ -0.7
SPARC-204ENST00000521569 CIAO1O76071 339 aa10.68□□□□□ -0.7
SPARC-204ENST00000521569 ZKSCAN4Q969J2 545 aaPredicted RBP10.68□□□□□ -0.7
SPARC-204ENST00000521569 SLC45A1Q9Y2W3 748 aa10.68□□□□□ -0.7
SPARC-204ENST00000521569 A0A1B0GUL6 1792 aa10.67□□□□□ -0.7
SPARC-204ENST00000521569 PDS5AQ29RF7 1337 aaKnown RBP10.67□□□□□ -0.7
SPARC-204ENST00000521569 CHAF1AQ13111 956 aaPredicted RBP10.67□□□□□ -0.7
SPARC-204ENST00000521569 SLC4A8Q2Y0W8 1093 aa10.67□□□□□ -0.7
SPARC-204ENST00000521569 ATG9AQ7Z3C6 839 aa10.67□□□□□ -0.7
SPARC-204ENST00000521569 FAM163AQ96GL9 167 aaPredicted RBP10.67□□□□□ -0.7
SPARC-204ENST00000521569 IDI2Q9BXS1 227 aa10.67□□□□□ -0.7
SPARC-204ENST00000521569 ARHGAP39Q9C0H5 1083 aa10.67□□□□□ -0.7
SPARC-204ENST00000521569 DAGLAQ9Y4D2 1042 aa10.67□□□□□ -0.7
SPARC-204ENST00000521569 SZT2Q5T011 3432 aa10.67□□□□□ -0.7
SPARC-204ENST00000521569 ATRNL1Q5VV63 1379 aa10.66□□□□□ -0.7
SPARC-204ENST00000521569 PHF20L1A8MW92 1017 aa10.66□□□□□ -0.7
SPARC-204ENST00000521569 E9PSI1 815 aa10.66□□□□□ -0.7
SPARC-204ENST00000521569 PDHXO00330 501 aa10.66□□□□□ -0.7
SPARC-204ENST00000521569 NPM3O75607 178 aaKnown RBP10.66□□□□□ -0.7
SPARC-204ENST00000521569 GJB1P08034 283 aa10.66□□□□□ -0.7
SPARC-204ENST00000521569 BCRP11274 1271 aa10.66□□□□□ -0.7
SPARC-204ENST00000521569 SLC5A1P13866 664 aa10.66□□□□□ -0.7
SPARC-204ENST00000521569 INPP5BP32019 993 aa10.66□□□□□ -0.7
SPARC-204ENST00000521569 PSMC4P43686 418 aa10.66□□□□□ -0.7
SPARC-204ENST00000521569 GJA8P48165 433 aa10.66□□□□□ -0.7
SPARC-204ENST00000521569 CACNB3P54284 484 aa10.66□□□□□ -0.7
SPARC-204ENST00000521569 ALDH1L2Q3SY69 923 aa10.66□□□□□ -0.7
SPARC-204ENST00000521569 CDC42EP5Q6NZY7 148 aa10.66□□□□□ -0.7
SPARC-204ENST00000521569 TRIM47Q96LD4 638 aa10.66□□□□□ -0.7
SPARC-204ENST00000521569 IQSEC3Q9UPP2 1182 aaPredicted RBP10.66□□□□□ -0.7
SPARC-204ENST00000521569 ARAP2Q8WZ64 1704 aa10.66□□□□□ -0.7
SPARC-204ENST00000521569 MAP4K4O95819 1239 aaPredicted RBP10.65□□□□□ -0.7
SPARC-204ENST00000521569 CT47B1P0C2W7 299 aaPredicted RBP10.65□□□□□ -0.7
SPARC-204ENST00000521569 CTGFP29279 349 aa10.65□□□□□ -0.7
SPARC-204ENST00000521569 GRK4P32298 578 aa10.65□□□□□ -0.7
SPARC-204ENST00000521569 GPAT2Q6NUI2 795 aa10.65□□□□□ -0.7
SPARC-204ENST00000521569 FASTKD5Q7L8L6 764 aaKnown RBP10.65□□□□□ -0.7
SPARC-204ENST00000521569 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.65□□□□□ -0.7
SPARC-204ENST00000521569 SHISA4Q96DD7 197 aa10.65□□□□□ -0.7
SPARC-204ENST00000521569 PARK7Q99497 189 aaKnown RBP10.65□□□□□ -0.7
SPARC-204ENST00000521569 PRO3102Q9H379 93 aa10.65□□□□□ -0.7
SPARC-204ENST00000521569 GNL3LQ9NVN8 582 aaKnown RBP10.65□□□□□ -0.7
SPARC-204ENST00000521569 FAM198AQ9UFP1 575 aa10.65□□□□□ -0.7
SPARC-204ENST00000521569 HDAC5Q9UQL6 1122 aa10.65□□□□□ -0.7
SPARC-204ENST00000521569 COLQQ9Y215 455 aaPredicted RBP10.65□□□□□ -0.7
SPARC-204ENST00000521569 OTOFQ9HC10 1997 aa10.65□□□□□ -0.71
SPARC-204ENST00000521569 CEP290O15078 2479 aa10.64□□□□□ -0.71
SPARC-204ENST00000521569 GAKO14976 1311 aa10.64□□□□□ -0.71
SPARC-204ENST00000521569 A0A0G2JLL6 359 aaPredicted RBP10.64□□□□□ -0.71
SPARC-204ENST00000521569 H0YGN5 161 aa10.64□□□□□ -0.71
SPARC-204ENST00000521569 ENTPD3O75355 529 aa10.64□□□□□ -0.71
SPARC-204ENST00000521569 OSBPP22059 807 aa10.64□□□□□ -0.71
SPARC-204ENST00000521569 MIGA2Q7L4E1 593 aa10.64□□□□□ -0.71
SPARC-204ENST00000521569 PRRT2Q7Z6L0 340 aaPredicted RBP10.64□□□□□ -0.71
SPARC-204ENST00000521569 TRMT2AQ8IZ69 625 aaKnown RBP10.64□□□□□ -0.71
SPARC-204ENST00000521569 ZGPATQ8N5A5 531 aaKnown RBP10.64□□□□□ -0.71
SPARC-204ENST00000521569 KLHDC4Q8TBB5 520 aa10.64□□□□□ -0.71
SPARC-204ENST00000521569 PXYLP1Q8TE99 480 aa10.64□□□□□ -0.71
SPARC-204ENST00000521569 SH3TC2Q8TF17 1288 aa10.64□□□□□ -0.71
SPARC-204ENST00000521569 SSH1Q8WYL5 1049 aa10.64□□□□□ -0.71
SPARC-204ENST00000521569 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.64□□□□□ -0.71
SPARC-204ENST00000521569 DENND2AQ9ULE3 1009 aa10.64□□□□□ -0.71
SPARC-204ENST00000521569 SALL2Q9Y467 1007 aaPredicted RBP10.64□□□□□ -0.71
SPARC-204ENST00000521569 RFX7Q2KHR2 1363 aa10.64□□□□□ -0.71
SPARC-204ENST00000521569 A0A1W2PPC1 479 aa10.63□□□□□ -0.71
SPARC-204ENST00000521569 TBC1D12O60347 775 aa10.63□□□□□ -0.71
SPARC-204ENST00000521569 CTNND1O60716 968 aaKnown RBP10.63□□□□□ -0.71
SPARC-204ENST00000521569 LDHBP07195 334 aaKnown RBP10.63□□□□□ -0.71
SPARC-204ENST00000521569 PTPRAP18433 802 aa10.63□□□□□ -0.71
SPARC-204ENST00000521569 IL15P40933 162 aaPredicted RBP10.63□□□□□ -0.71
SPARC-204ENST00000521569 NFIAQ12857 509 aa10.63□□□□□ -0.71
SPARC-204ENST00000521569 IRF5Q13568 498 aa10.63□□□□□ -0.71
SPARC-204ENST00000521569 SLAIN1Q8ND83 568 aa10.63□□□□□ -0.71
SPARC-204ENST00000521569 COPRSQ9NQ92 184 aa10.63□□□□□ -0.71
SPARC-204ENST00000521569 CEP126Q9P2H0 1117 aa10.63□□□□□ -0.71
SPARC-204ENST00000521569 AFG3L2Q9Y4W6 797 aa10.63□□□□□ -0.71
SPARC-204ENST00000521569 PRDX5P30044 214 aa10.62□□□□□ -0.71
SPARC-204ENST00000521569 FCGRTP55899 365 aa10.62□□□□□ -0.71
SPARC-204ENST00000521569 UBXN2AP68543 259 aa10.62□□□□□ -0.71
SPARC-204ENST00000521569 SLFN5Q08AF3 891 aa10.62□□□□□ -0.71
SPARC-204ENST00000521569 MTFR1Q15390 333 aa10.62□□□□□ -0.71
SPARC-204ENST00000521569 SLF2Q8IX21 1173 aa10.62□□□□□ -0.71
SPARC-204ENST00000521569 SCYL3Q8IZE3 742 aa10.62□□□□□ -0.71
SPARC-204ENST00000521569 RAET1EQ8TD07 263 aa10.62□□□□□ -0.71
SPARC-204ENST00000521569 USP40Q9NVE5 1235 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms