RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 JARID2Q92833 1246 aaPredicted RBP8.45□□□□□ -1.06
SKP1-208ENST00000521216 RSRP1Q9BUV0 290 aa8.45□□□□□ -1.06
SKP1-208ENST00000521216 RNF208Q9H0X6 261 aa8.45□□□□□ -1.06
SKP1-208ENST00000521216 PCDHB5Q9Y5E4 795 aa8.45□□□□□ -1.06
SKP1-208ENST00000521216 C1QTNF9BB2RNN3 333 aa8.44□□□□□ -1.06
SKP1-208ENST00000521216 GDF11O95390 407 aa8.44□□□□□ -1.06
SKP1-208ENST00000521216 GLB1P16278 677 aa8.44□□□□□ -1.06
SKP1-208ENST00000521216 CHRNA4P43681 627 aa8.44□□□□□ -1.06
SKP1-208ENST00000521216 FAM160A1Q05DH4 1040 aa8.44□□□□□ -1.06
SKP1-208ENST00000521216 AKAP4Q5JQC9 854 aa8.44□□□□□ -1.06
SKP1-208ENST00000521216 AGMOQ6ZNB7 445 aa8.44□□□□□ -1.06
SKP1-208ENST00000521216 ERMP1Q7Z2K6 904 aa8.44□□□□□ -1.06
SKP1-208ENST00000521216 USP48Q86UV5 1035 aa8.44□□□□□ -1.06
SKP1-208ENST00000521216 NT5DC4Q86YG4 428 aa8.44□□□□□ -1.06
SKP1-208ENST00000521216 TMEM130Q8N3G9 435 aa8.44□□□□□ -1.06
SKP1-208ENST00000521216 C12orf50Q8NA57 414 aaPredicted RBP8.44□□□□□ -1.06
SKP1-208ENST00000521216 WFDC12Q8WWY7 111 aa8.44□□□□□ -1.06
SKP1-208ENST00000521216 TMEM74Q96NL1 305 aa8.44□□□□□ -1.06
SKP1-208ENST00000521216 PCDHGB7Q9Y5F8 929 aa8.44□□□□□ -1.06
SKP1-208ENST00000521216 PF4P02776 101 aa8.43□□□□□ -1.06
SKP1-208ENST00000521216 TFE3P19532 575 aaPredicted RBP8.43□□□□□ -1.06
SKP1-208ENST00000521216 RPS26P62854 115 aaKnown RBP8.43□□□□□ -1.06
SKP1-208ENST00000521216 HNRNPUQ00839 825 aaKnown RBP eCLIP8.43□□□□□ -1.06
SKP1-208ENST00000521216 ZNF252P-AS1Q0IIN9 211 aa8.43□□□□□ -1.06
SKP1-208ENST00000521216 SEPT6Q14141 434 aa8.43□□□□□ -1.06
SKP1-208ENST00000521216 ZNF394Q53GI3 561 aa8.43□□□□□ -1.06
SKP1-208ENST00000521216 FDX2Q6P4F2 183 aa8.43□□□□□ -1.06
SKP1-208ENST00000521216 CD163Q86VB7 1156 aa8.43□□□□□ -1.06
SKP1-208ENST00000521216 PHC3Q8NDX5 983 aa8.43□□□□□ -1.06
SKP1-208ENST00000521216 GPBAR1Q8TDU6 330 aa8.43□□□□□ -1.06
SKP1-208ENST00000521216 WDR89Q96FK6 387 aaPredicted RBP8.43□□□□□ -1.06
SKP1-208ENST00000521216 MIR1-1HGQ9H1L0 117 aa8.43□□□□□ -1.06
SKP1-208ENST00000521216 CYP4F12Q9HCS2 524 aa8.43□□□□□ -1.06
SKP1-208ENST00000521216 SART1O43290 800 aaKnown RBP8.42□□□□□ -1.06
SKP1-208ENST00000521216 AOC2O75106 756 aa8.42□□□□□ -1.06
SKP1-208ENST00000521216 NOS3P29474 1203 aa8.42□□□□□ -1.06
SKP1-208ENST00000521216 CAMK2GQ13555 558 aaPredicted RBP8.42□□□□□ -1.06
SKP1-208ENST00000521216 MBTPS1Q14703 1052 aa8.42□□□□□ -1.06
SKP1-208ENST00000521216 SNAP47Q5SQN1 464 aa8.42□□□□□ -1.06
SKP1-208ENST00000521216 TMEM151AQ8N4L1 468 aa8.42□□□□□ -1.06
SKP1-208ENST00000521216 TMPRSS13Q9BYE2 586 aa8.42□□□□□ -1.06
SKP1-208ENST00000521216 PCDHA4Q9UN74 947 aa8.42□□□□□ -1.06
SKP1-208ENST00000521216 ZNF862O60290 1169 aa8.41□□□□□ -1.06
SKP1-208ENST00000521216 TRIM37O94972 964 aa8.41□□□□□ -1.06
SKP1-208ENST00000521216 SLFN14P0C7P3 912 aa8.41□□□□□ -1.06
SKP1-208ENST00000521216 DRD2P14416 443 aa8.41□□□□□ -1.06
SKP1-208ENST00000521216 ERCC5P28715 1186 aaPredicted RBP8.41□□□□□ -1.06
SKP1-208ENST00000521216 ADGRE1Q14246 886 aa8.41□□□□□ -1.06
SKP1-208ENST00000521216 METTL16Q86W50 562 aaKnown RBP8.41□□□□□ -1.06
SKP1-208ENST00000521216 KRT82Q9NSB4 513 aa8.41□□□□□ -1.06
SKP1-208ENST00000521216 AP4E1Q9UPM8 1137 aa8.41□□□□□ -1.06
SKP1-208ENST00000521216 MEGF11A6BM72 1044 aa8.4□□□□□ -1.06
SKP1-208ENST00000521216 GSK3AP49840 483 aa8.4□□□□□ -1.06
SKP1-208ENST00000521216 PTPN11Q06124 597 aaPredicted RBP8.4□□□□□ -1.06
SKP1-208ENST00000521216 DIEXFQ68CQ4 756 aaKnown RBP8.4□□□□□ -1.06
SKP1-208ENST00000521216 TXNRD3Q86VQ6 643 aa8.4□□□□□ -1.06
SKP1-208ENST00000521216 GOLM1Q8NBJ4 401 aa8.4□□□□□ -1.06
SKP1-208ENST00000521216 WDR18Q9BV38 432 aa8.4□□□□□ -1.06
SKP1-208ENST00000521216 EIF4A3P38919 411 aaKnown RBP8.39□□□□□ -1.07
SKP1-208ENST00000521216 LMNB2Q03252 620 aa8.39□□□□□ -1.07
SKP1-208ENST00000521216 ANKRD34AQ69YU3 496 aa8.39□□□□□ -1.07
SKP1-208ENST00000521216 DYMQ7RTS9 669 aa8.39□□□□□ -1.07
SKP1-208ENST00000521216 TRIM42Q8IWZ5 723 aa8.39□□□□□ -1.07
SKP1-208ENST00000521216 CEP41Q9BYV8 373 aa8.39□□□□□ -1.07
SKP1-208ENST00000521216 CSADQ9Y600 493 aa8.39□□□□□ -1.07
SKP1-208ENST00000521216 DCDC2CA8MYV0 355 aa8.38□□□□□ -1.07
SKP1-208ENST00000521216 GATA4P43694 442 aa8.38□□□□□ -1.07
SKP1-208ENST00000521216 RACK1P63244 317 aaKnown RBP8.38□□□□□ -1.07
SKP1-208ENST00000521216 SOX4Q06945 474 aaPredicted RBP8.38□□□□□ -1.07
SKP1-208ENST00000521216 KIF4BQ2VIQ3 1234 aa8.38□□□□□ -1.07
SKP1-208ENST00000521216 PLA2G4EQ3MJ16 856 aa8.38□□□□□ -1.07
SKP1-208ENST00000521216 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.38□□□□□ -1.07
SKP1-208ENST00000521216 BNC2Q6ZN30 1099 aaPredicted RBP8.38□□□□□ -1.07
SKP1-208ENST00000521216 ZNF654Q8IZM8 581 aa8.38□□□□□ -1.07
SKP1-208ENST00000521216 SMG8Q8ND04 991 aaKnown RBP8.38□□□□□ -1.07
SKP1-208ENST00000521216 ZNF296Q8WUU4 475 aaPredicted RBP8.38□□□□□ -1.07
SKP1-208ENST00000521216 RHOVQ96L33 236 aa8.38□□□□□ -1.07
SKP1-208ENST00000521216 SPON2Q9BUD6 331 aa8.38□□□□□ -1.07
SKP1-208ENST00000521216 PICK1Q9NRD5 415 aa8.38□□□□□ -1.07
SKP1-208ENST00000521216 DDX41Q9UJV9 622 aaKnown RBP8.38□□□□□ -1.07
SKP1-208ENST00000521216 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.38□□□□□ -1.07
SKP1-208ENST00000521216 GAS2O43903 313 aaKnown RBP8.37□□□□□ -1.07
SKP1-208ENST00000521216 ADH5P11766 374 aa8.37□□□□□ -1.07
SKP1-208ENST00000521216 FBXL19Q6PCT2 694 aa8.37□□□□□ -1.07
SKP1-208ENST00000521216 GAL3ST3Q96A11 431 aa8.37□□□□□ -1.07
SKP1-208ENST00000521216 ELMO3Q96BJ8 720 aa8.37□□□□□ -1.07
SKP1-208ENST00000521216 MEGF10Q96KG7 1140 aa8.37□□□□□ -1.07
SKP1-208ENST00000521216 UBL7Q96S82 380 aaPredicted RBP8.37□□□□□ -1.07
SKP1-208ENST00000521216 CCSER2Q9H7U1 834 aa8.37□□□□□ -1.07
SKP1-208ENST00000521216 SUGCTQ9HAC7 445 aa8.37□□□□□ -1.07
SKP1-208ENST00000521216 ADAMTS1Q9UHI8 967 aa8.37□□□□□ -1.07
SKP1-208ENST00000521216 PPP1R9AQ9ULJ8 1098 aa8.37□□□□□ -1.07
SKP1-208ENST00000521216 BPNT1O95861 308 aa8.36□□□□□ -1.07
SKP1-208ENST00000521216 F13A1P00488 732 aa8.36□□□□□ -1.07
SKP1-208ENST00000521216 PREPP48147 710 aa8.36□□□□□ -1.07
SKP1-208ENST00000521216 USP11P51784 963 aa8.36□□□□□ -1.07
SKP1-208ENST00000521216 ID3Q02535 119 aa8.36□□□□□ -1.07
SKP1-208ENST00000521216 INPP5AQ14642 412 aa8.36□□□□□ -1.07
SKP1-208ENST00000521216 SCARA3Q6AZY7 606 aa8.36□□□□□ -1.07
SKP1-208ENST00000521216 C12orf40Q86WS4 652 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms