RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 LGR6Q9HBX8 967 aa7.07□□□□□ -1.28
HDAC2-208ENST00000520746 ANO2Q9NQ90 1003 aa7.07□□□□□ -1.28
HDAC2-208ENST00000520746 PPP1R9AQ9ULJ8 1098 aa7.07□□□□□ -1.28
HDAC2-208ENST00000520746 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.07□□□□□ -1.28
HDAC2-208ENST00000520746 ZNF648Q5T619 568 aaPredicted RBP7.06□□□□□ -1.28
HDAC2-208ENST00000520746 USPL1Q5W0Q7 1092 aa7.06□□□□□ -1.28
HDAC2-208ENST00000520746 KRTAP4-9Q9BYQ8 210 aa7.06□□□□□ -1.28
HDAC2-208ENST00000520746 CARMIL2Q6F5E8 1435 aa7.06□□□□□ -1.28
HDAC2-208ENST00000520746 ABL1P00519 1130 aa7.05□□□□□ -1.28
HDAC2-208ENST00000520746 ITPKAP23677 461 aa7.05□□□□□ -1.28
HDAC2-208ENST00000520746 PDE3AQ14432 1141 aa7.05□□□□□ -1.28
HDAC2-208ENST00000520746 KIAA0319Q5VV43 1072 aa7.05□□□□□ -1.28
HDAC2-208ENST00000520746 DDX54Q8TDD1 881 aaKnown RBP7.05□□□□□ -1.28
HDAC2-208ENST00000520746 MTMR7Q9Y216 660 aa7.05□□□□□ -1.28
HDAC2-208ENST00000520746 SYNGAP1Q96PV0 1343 aa7.04□□□□□ -1.28
HDAC2-208ENST00000520746 TMPRSS2O15393 492 aa7.04□□□□□ -1.28
HDAC2-208ENST00000520746 BNIP3Q12983 259 aa7.04□□□□□ -1.28
HDAC2-208ENST00000520746 CYP27C1Q4G0S4 372 aa7.04□□□□□ -1.28
HDAC2-208ENST00000520746 PLD6Q8N2A8 252 aaKnown RBP7.04□□□□□ -1.28
HDAC2-208ENST00000520746 MISP3Q96FF7 219 aa7.04□□□□□ -1.28
HDAC2-208ENST00000520746 BIN1O00499 593 aa7.03□□□□□ -1.28
HDAC2-208ENST00000520746 CDK5R2Q13319 367 aa7.03□□□□□ -1.28
HDAC2-208ENST00000520746 AP3B2Q13367 1082 aa7.03□□□□□ -1.28
HDAC2-208ENST00000520746 LCE4AQ5TA78 99 aa7.03□□□□□ -1.28
HDAC2-208ENST00000520746 FAM181AQ8N9Y4 354 aa7.03□□□□□ -1.28
HDAC2-208ENST00000520746 FAM87AP0C7U9 286 aa7.02□□□□□ -1.29
HDAC2-208ENST00000520746 CD8BP10966 210 aa7.02□□□□□ -1.29
HDAC2-208ENST00000520746 FUT4P22083 530 aa7.02□□□□□ -1.29
HDAC2-208ENST00000520746 ZNF124Q15973 351 aa7.02□□□□□ -1.29
HDAC2-208ENST00000520746 NETO1Q8TDF5 533 aa7.02□□□□□ -1.29
HDAC2-208ENST00000520746 WDR89Q96FK6 387 aaPredicted RBP7.02□□□□□ -1.29
HDAC2-208ENST00000520746 EHD4Q9H223 541 aa7.02□□□□□ -1.29
HDAC2-208ENST00000520746 CRIM1Q9NZV1 1036 aa7.02□□□□□ -1.29
HDAC2-208ENST00000520746 U3KQE9 123 aa7.02□□□□□ -1.29
HDAC2-208ENST00000520746 CARNS1A5YM72 827 aa7.01□□□□□ -1.29
HDAC2-208ENST00000520746 LIG1P18858 919 aa7.01□□□□□ -1.29
HDAC2-208ENST00000520746 ATG4DQ86TL0 474 aaPredicted RBP7.01□□□□□ -1.29
HDAC2-208ENST00000520746 GLIS3Q8NEA6 775 aa7.01□□□□□ -1.29
HDAC2-208ENST00000520746 CCDC86Q9H6F5 360 aaKnown RBP7.01□□□□□ -1.29
HDAC2-208ENST00000520746 RC3H2Q9HBD1 1191 aaKnown RBP7.01□□□□□ -1.29
HDAC2-208ENST00000520746 ABCB6Q9NP58 842 aa7.01□□□□□ -1.29
HDAC2-208ENST00000520746 NPHS2Q9NP85 383 aa7.01□□□□□ -1.29
HDAC2-208ENST00000520746 MBNL3Q9NUK0 354 aaKnown RBP7.01□□□□□ -1.29
HDAC2-208ENST00000520746 ADAMTS6Q9UKP5 1117 aa7.01□□□□□ -1.29
HDAC2-208ENST00000520746 RNASE1P07998 156 aaKnown RBP7□□□□□ -1.29
HDAC2-208ENST00000520746 CD96P40200 585 aa7□□□□□ -1.29
HDAC2-208ENST00000520746 PTPN12Q05209 780 aaKnown RBP7□□□□□ -1.29
HDAC2-208ENST00000520746 ORC1Q13415 861 aa7□□□□□ -1.29
HDAC2-208ENST00000520746 FAM168AQ92567 244 aa7□□□□□ -1.29
HDAC2-208ENST00000520746 FANCD2OSQ96PS1 177 aa7□□□□□ -1.29
HDAC2-208ENST00000520746 PIDD1Q9HB75 910 aa7□□□□□ -1.29
HDAC2-208ENST00000520746 ATXN3LQ9H3M9 355 aa6.99□□□□□ -1.29
HDAC2-208ENST00000520746 PCDHGC5Q9Y5F6 944 aa6.99□□□□□ -1.29
HDAC2-208ENST00000520746 DBX1A6NMT0 343 aa6.98□□□□□ -1.29
HDAC2-208ENST00000520746 ZNF862O60290 1169 aa6.98□□□□□ -1.29
HDAC2-208ENST00000520746 ICMTO60725 284 aa6.98□□□□□ -1.29
HDAC2-208ENST00000520746 CPNE3O75131 537 aaKnown RBP6.98□□□□□ -1.29
HDAC2-208ENST00000520746 PPP1R15AO75807 674 aaPredicted RBP6.98□□□□□ -1.29
HDAC2-208ENST00000520746 ID3Q02535 119 aa6.98□□□□□ -1.29
HDAC2-208ENST00000520746 PRKCQQ04759 706 aa6.98□□□□□ -1.29
HDAC2-208ENST00000520746 FAAP100Q0VG06 881 aa6.98□□□□□ -1.29
HDAC2-208ENST00000520746 ECM1Q16610 540 aa6.98□□□□□ -1.29
HDAC2-208ENST00000520746 PRPF40BQ6NWY9 871 aaKnown RBP6.98□□□□□ -1.29
HDAC2-208ENST00000520746 SMYD4Q8IYR2 804 aaPredicted RBP6.98□□□□□ -1.29
HDAC2-208ENST00000520746 LRRN4CLQ8ND94 238 aa6.98□□□□□ -1.29
HDAC2-208ENST00000520746 ZC3H12CQ9C0D7 883 aaKnown RBP6.98□□□□□ -1.29
HDAC2-208ENST00000520746 DISC1Q9NRI5 854 aa6.98□□□□□ -1.29
HDAC2-208ENST00000520746 EGFL7Q9UHF1 273 aa6.98□□□□□ -1.29
HDAC2-208ENST00000520746 VAV3Q9UKW4 847 aa6.98□□□□□ -1.29
HDAC2-208ENST00000520746 BRPF3Q9ULD4 1205 aa6.98□□□□□ -1.29
HDAC2-208ENST00000520746 LEFTY1O75610 366 aa6.97□□□□□ -1.29
HDAC2-208ENST00000520746 FARP2O94887 1054 aaPredicted RBP6.97□□□□□ -1.29
HDAC2-208ENST00000520746 NEFLP07196 543 aa6.97□□□□□ -1.29
HDAC2-208ENST00000520746 ZNF157P51786 506 aaPredicted RBP6.97□□□□□ -1.29
HDAC2-208ENST00000520746 IFI16Q16666 785 aaKnown RBP6.97□□□□□ -1.29
HDAC2-208ENST00000520746 RPS26P11Q5JNZ5 115 aaPredicted RBP6.97□□□□□ -1.29
HDAC2-208ENST00000520746 SPOCD1Q6ZMY3 1216 aa6.97□□□□□ -1.29
HDAC2-208ENST00000520746 H3BRB1 525 aa6.96□□□□□ -1.3
HDAC2-208ENST00000520746 SLFN14P0C7P3 912 aa6.96□□□□□ -1.3
HDAC2-208ENST00000520746 TTLL4Q14679 1199 aa6.96□□□□□ -1.3
HDAC2-208ENST00000520746 KIF4BQ2VIQ3 1234 aa6.96□□□□□ -1.3
HDAC2-208ENST00000520746 PI4K2BQ8TCG2 481 aa6.96□□□□□ -1.3
HDAC2-208ENST00000520746 FAM129BQ96TA1 746 aa6.96□□□□□ -1.3
HDAC2-208ENST00000520746 TUT1Q9H6E5 874 aaKnown RBP6.96□□□□□ -1.3
HDAC2-208ENST00000520746 TMEM238LA0A1B0GVL6 79 aa6.95□□□□□ -1.3
HDAC2-208ENST00000520746 CEACAM5P06731 702 aa6.95□□□□□ -1.3
HDAC2-208ENST00000520746 GSTP1P09211 210 aaKnown RBP6.95□□□□□ -1.3
HDAC2-208ENST00000520746 HCLS1P14317 486 aaPredicted RBP6.95□□□□□ -1.3
HDAC2-208ENST00000520746 OXCT1P55809 520 aa6.95□□□□□ -1.3
HDAC2-208ENST00000520746 ARHGAP4P98171 946 aa6.95□□□□□ -1.3
HDAC2-208ENST00000520746 AOC3Q16853 763 aa6.95□□□□□ -1.3
HDAC2-208ENST00000520746 TMEM40Q8WWA1 233 aa6.95□□□□□ -1.3
HDAC2-208ENST00000520746 DUSP23Q9BVJ7 150 aa6.95□□□□□ -1.3
HDAC2-208ENST00000520746 MKNK2Q9HBH9 465 aa6.95□□□□□ -1.3
HDAC2-208ENST00000520746 KRT82Q9NSB4 513 aa6.95□□□□□ -1.3
HDAC2-208ENST00000520746 PLAGL2Q9UPG8 496 aa6.95□□□□□ -1.3
HDAC2-208ENST00000520746 RNGTTO60942 597 aaKnown RBP6.94□□□□□ -1.3
HDAC2-208ENST00000520746 FBLN7Q53RD9 439 aa6.94□□□□□ -1.3
HDAC2-208ENST00000520746 GLYCTKQ8IVS8 523 aa6.94□□□□□ -1.3
HDAC2-208ENST00000520746 CCDC74AQ96AQ1 378 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms