RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 OLFM3Q96PB7 478 aa17.22■□□□□ 0.35
UBR5-207ENST00000520539 TYRO3Q06418 890 aa17.22■□□□□ 0.35
UBR5-207ENST00000520539 PRPF40BQ6NWY9 871 aaKnown RBP17.22■□□□□ 0.35
UBR5-207ENST00000520539 KRT4P19013 534 aa17.22■□□□□ 0.35
UBR5-207ENST00000520539 OAS2P29728 719 aaKnown RBP17.22■□□□□ 0.35
UBR5-207ENST00000520539 NPHP3Q7Z494 1330 aa17.22■□□□□ 0.35
UBR5-207ENST00000520539 GOLGA8CPA6NN73 597 aa17.22■□□□□ 0.35
UBR5-207ENST00000520539 B4DLN1 442 aa17.22■□□□□ 0.35
UBR5-207ENST00000520539 MRPL12P52815 198 aaKnown RBP17.22■□□□□ 0.35
UBR5-207ENST00000520539 DDX21Q9NR30 783 aaKnown RBP eCLIP17.22■□□□□ 0.35
UBR5-207ENST00000520539 PHKBQ93100 1093 aa17.21■□□□□ 0.35
UBR5-207ENST00000520539 OCA2Q04671 838 aa17.21■□□□□ 0.35
UBR5-207ENST00000520539 TCP11L2Q8N4U5 519 aa17.21■□□□□ 0.35
UBR5-207ENST00000520539 POLR3CQ9BUI4 534 aaPredicted RBP17.21■□□□□ 0.35
UBR5-207ENST00000520539 STK38LQ9Y2H1 464 aa17.21■□□□□ 0.35
UBR5-207ENST00000520539 DMTNQ08495 405 aa17.21■□□□□ 0.35
UBR5-207ENST00000520539 ARHGAP18Q8N392 663 aa17.21■□□□□ 0.35
UBR5-207ENST00000520539 MKNK2Q9HBH9 465 aa17.21■□□□□ 0.35
UBR5-207ENST00000520539 SESN3P58005 492 aa17.21■□□□□ 0.35
UBR5-207ENST00000520539 PPP2R5DQ14738 602 aa17.21■□□□□ 0.35
UBR5-207ENST00000520539 ALDH1L2Q3SY69 923 aa17.21■□□□□ 0.35
UBR5-207ENST00000520539 FCHSD1Q86WN1 690 aa17.21■□□□□ 0.35
UBR5-207ENST00000520539 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.21■□□□□ 0.35
UBR5-207ENST00000520539 SLC4A2P04920 1241 aa17.21■□□□□ 0.35
UBR5-207ENST00000520539 RUNDC3BQ96NL0 473 aa17.21■□□□□ 0.35
UBR5-207ENST00000520539 MAD1L1Q9Y6D9 718 aa17.21■□□□□ 0.35
UBR5-207ENST00000520539 ERICH3Q5RHP9 1530 aa17.21■□□□□ 0.34
UBR5-207ENST00000520539 PFDN6O15212 129 aa17.21■□□□□ 0.34
UBR5-207ENST00000520539 ANGPT1Q15389 498 aa17.21■□□□□ 0.34
UBR5-207ENST00000520539 TMCO4Q5TGY1 634 aa17.21■□□□□ 0.34
UBR5-207ENST00000520539 TRIM8Q9BZR9 551 aa17.21■□□□□ 0.34
UBR5-207ENST00000520539 BRAPQ7Z569 592 aa17.2■□□□□ 0.34
UBR5-207ENST00000520539 TYW1Q9NV66 732 aaKnown RBP17.2■□□□□ 0.34
UBR5-207ENST00000520539 STK24Q9Y6E0 443 aa17.2■□□□□ 0.34
UBR5-207ENST00000520539 HS2ST1Q7LGA3 356 aa17.2■□□□□ 0.34
UBR5-207ENST00000520539 CAPS2Q9BXY5 557 aa17.2■□□□□ 0.34
UBR5-207ENST00000520539 FAM13AO94988 1023 aa17.2■□□□□ 0.34
UBR5-207ENST00000520539 CAVIN4Q5BKX8 364 aa17.2■□□□□ 0.34
UBR5-207ENST00000520539 RASGRF2O14827 1237 aa17.2■□□□□ 0.34
UBR5-207ENST00000520539 MAP3K7O43318 606 aa17.2■□□□□ 0.34
UBR5-207ENST00000520539 IARSP41252 1262 aaKnown RBP17.2■□□□□ 0.34
UBR5-207ENST00000520539 CCDC186Q7Z3E2 898 aa17.2■□□□□ 0.34
UBR5-207ENST00000520539 CCT6AP40227 531 aaKnown RBP17.2■□□□□ 0.34
UBR5-207ENST00000520539 SLC12A2P55011 1212 aa17.2■□□□□ 0.34
UBR5-207ENST00000520539 NUP58Q9BVL2 599 aa17.2■□□□□ 0.34
UBR5-207ENST00000520539 TBC1D2Q9BYX2 928 aa17.2■□□□□ 0.34
UBR5-207ENST00000520539 TRIM15Q9C019 465 aa17.2■□□□□ 0.34
UBR5-207ENST00000520539 MAP3K10Q02779 954 aa17.19■□□□□ 0.34
UBR5-207ENST00000520539 C6orf118Q5T5N4 469 aa17.19■□□□□ 0.34
UBR5-207ENST00000520539 LZTFL1Q9NQ48 299 aa17.19■□□□□ 0.34
UBR5-207ENST00000520539 METAP2P50579 478 aaKnown RBP eCLIP17.19■□□□□ 0.34
UBR5-207ENST00000520539 FGFR1OP2Q9NVK5 253 aa17.19■□□□□ 0.34
UBR5-207ENST00000520539 STX10O60499 249 aa17.19■□□□□ 0.34
UBR5-207ENST00000520539 SSFA2P28290 1259 aa17.19■□□□□ 0.34
UBR5-207ENST00000520539 CNOT10Q9H9A5 744 aaKnown RBP17.19■□□□□ 0.34
UBR5-207ENST00000520539 CALML3P27482 149 aa17.19■□□□□ 0.34
UBR5-207ENST00000520539 N4BP2L2Q92802 583 aaPredicted RBP17.19■□□□□ 0.34
UBR5-207ENST00000520539 CNNM2Q9H8M5 875 aa17.19■□□□□ 0.34
UBR5-207ENST00000520539 ABCC8Q09428 1581 aa17.19■□□□□ 0.34
UBR5-207ENST00000520539 SESN1Q9Y6P5 492 aa17.19■□□□□ 0.34
UBR5-207ENST00000520539 SART1O43290 800 aaKnown RBP17.19■□□□□ 0.34
UBR5-207ENST00000520539 HDAC4P56524 1084 aa17.19■□□□□ 0.34
UBR5-207ENST00000520539 TRIML1Q8N9V2 468 aa17.19■□□□□ 0.34
UBR5-207ENST00000520539 OPTNQ96CV9 577 aa17.19■□□□□ 0.34
UBR5-207ENST00000520539 EXOC5O00471 708 aa17.19■□□□□ 0.34
UBR5-207ENST00000520539 GLE1Q53GS7 698 aaKnown RBP17.19■□□□□ 0.34
UBR5-207ENST00000520539 RAPGEF2Q9Y4G8 1499 aa17.19■□□□□ 0.34
UBR5-207ENST00000520539 JADE1Q6IE81 842 aa17.18■□□□□ 0.34
UBR5-207ENST00000520539 XRCC6P12956 609 aaKnown RBP eCLIP17.18■□□□□ 0.346e-7■■■■■ 32.2
UBR5-207ENST00000520539 GRK7Q8WTQ7 553 aa17.18■□□□□ 0.34
UBR5-207ENST00000520539 KRT15P19012 456 aa17.18■□□□□ 0.34
UBR5-207ENST00000520539 GJC2Q5T442 439 aaPredicted RBP17.18■□□□□ 0.34
UBR5-207ENST00000520539 CRACR2BQ8N4Y2 399 aaPredicted RBP17.18■□□□□ 0.34
UBR5-207ENST00000520539 PACSIN2Q9UNF0 486 aaPredicted RBP17.18■□□□□ 0.34
UBR5-207ENST00000520539 ARHGAP10A1A4S6 786 aa17.18■□□□□ 0.34
UBR5-207ENST00000520539 PTGS1P23219 599 aa17.18■□□□□ 0.34
UBR5-207ENST00000520539 TEX12Q9BXU0 123 aa17.18■□□□□ 0.34
UBR5-207ENST00000520539 ITGB1BP2Q9UKP3 347 aa17.18■□□□□ 0.34
UBR5-207ENST00000520539 TRIM6Q9C030 488 aaPredicted RBP17.18■□□□□ 0.34
UBR5-207ENST00000520539 SAMM50Q9Y512 469 aa17.18■□□□□ 0.34
UBR5-207ENST00000520539 NBPF10Q6P3W6 841 aaKnown RBP17.18■□□□□ 0.34
UBR5-207ENST00000520539 KRT71Q3SY84 523 aa17.18■□□□□ 0.34
UBR5-207ENST00000520539 RIOK3O14730 519 aaKnown RBP17.18■□□□□ 0.34
UBR5-207ENST00000520539 CLTAP09496 248 aa17.18■□□□□ 0.34
UBR5-207ENST00000520539 AOPEPQ8N6M6 819 aa17.18■□□□□ 0.34
UBR5-207ENST00000520539 HARSP12081 509 aaKnown RBP17.17■□□□□ 0.34
UBR5-207ENST00000520539 ZNF213O14771 459 aa17.17■□□□□ 0.34
UBR5-207ENST00000520539 SPOPO43791 374 aa17.17■□□□□ 0.34
UBR5-207ENST00000520539 C1orf115Q9H7X2 142 aa17.17■□□□□ 0.34
UBR5-207ENST00000520539 MRPL28Q13084 256 aaKnown RBP17.17■□□□□ 0.34
UBR5-207ENST00000520539 SLC38A10Q9HBR0 1119 aa17.17■□□□□ 0.34
UBR5-207ENST00000520539 MCM7P33993 719 aa17.17■□□□□ 0.34
UBR5-207ENST00000520539 IDH1O75874 414 aaKnown RBP17.17■□□□□ 0.34
UBR5-207ENST00000520539 SAAL1Q96ER3 474 aa17.17■□□□□ 0.34
UBR5-207ENST00000520539 ACTR5Q9H9F9 607 aaPredicted RBP17.17■□□□□ 0.34
UBR5-207ENST00000520539 ZNF652Q9Y2D9 606 aa17.17■□□□□ 0.34
UBR5-207ENST00000520539 ASIC1P78348 528 aa17.17■□□□□ 0.34
UBR5-207ENST00000520539 KRT23Q9C075 422 aa17.17■□□□□ 0.34
UBR5-207ENST00000520539 RTL9Q8NET4 1388 aa17.17■□□□□ 0.34
UBR5-207ENST00000520539 DDX42Q86XP3 938 aaKnown RBP eCLIP17.17■□□□□ 0.342e-7■■■■□ 20.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms