RNA–Protein interactions for RNA: ENST00000519938.5

IKBKB-213, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 2

Gene IKBKB, Length 2,403 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-213ENST00000519938 C4AP0C0L4 1744 aa20.52■□□□□ 0.88
IKBKB-213ENST00000519938 C4BP0C0L5 1744 aa20.52■□□□□ 0.88
IKBKB-213ENST00000519938 CAMTA2O94983 1202 aa20.52■□□□□ 0.87
IKBKB-213ENST00000519938 GNAT2P19087 354 aa20.52■□□□□ 0.87
IKBKB-213ENST00000519938 NKX2-3Q8TAU0 364 aa20.52■□□□□ 0.87
IKBKB-213ENST00000519938 LY9Q9HBG7 655 aa20.52■□□□□ 0.87
IKBKB-213ENST00000519938 NRBP1Q9UHY1 535 aa20.52■□□□□ 0.87
IKBKB-213ENST00000519938 RTL9Q8NET4 1388 aa20.52■□□□□ 0.87
IKBKB-213ENST00000519938 MYO5AQ9Y4I1 1855 aaKnown RBP20.51■□□□□ 0.87
IKBKB-213ENST00000519938 DOT1LQ8TEK3 1739 aa20.51■□□□□ 0.87
IKBKB-213ENST00000519938 FAM177BA6PVY3 158 aa20.51■□□□□ 0.87
IKBKB-213ENST00000519938 TMEM67Q5HYA8 995 aa20.51■□□□□ 0.87
IKBKB-213ENST00000519938 DHX40Q8IX18 779 aaKnown RBP20.51■□□□□ 0.87
IKBKB-213ENST00000519938 LOC102724428A0A0B4J2F2 783 aa20.51■□□□□ 0.87
IKBKB-213ENST00000519938 CMA1P23946 247 aa20.51■□□□□ 0.87
IKBKB-213ENST00000519938 SIK1P57059 783 aa20.51■□□□□ 0.87
IKBKB-213ENST00000519938 SLC39A14Q15043 492 aa20.51■□□□□ 0.87
IKBKB-213ENST00000519938 MAP7D2Q96T17 732 aa20.51■□□□□ 0.87
IKBKB-213ENST00000519938 KRT23Q9C075 422 aa20.51■□□□□ 0.87
IKBKB-213ENST00000519938 EPB41L4AQ9HCS5 686 aaPredicted RBP20.51■□□□□ 0.87
IKBKB-213ENST00000519938 KIAA1468Q9P260 1216 aa20.51■□□□□ 0.87
IKBKB-213ENST00000519938 WNK3Q9BYP7 1800 aa20.5■□□□□ 0.87
IKBKB-213ENST00000519938 CDC27P30260 824 aa20.5■□□□□ 0.87
IKBKB-213ENST00000519938 IARSP41252 1262 aaKnown RBP20.5■□□□□ 0.87
IKBKB-213ENST00000519938 ZRSR1Q15695 479 aaKnown RBP20.5■□□□□ 0.87
IKBKB-213ENST00000519938 KRT40Q6A162 431 aa20.5■□□□□ 0.87
IKBKB-213ENST00000519938 MICU3Q86XE3 530 aa20.5■□□□□ 0.87
IKBKB-213ENST00000519938 NACAP1Q9BZK3 213 aa20.5■□□□□ 0.87
IKBKB-213ENST00000519938 SPATA31A1Q5TZJ5 1347 aa20.5■□□□□ 0.87
IKBKB-213ENST00000519938 RBM10P98175 930 aaKnown RBP20.49■□□□□ 0.87
IKBKB-213ENST00000519938 AKNAD1Q5T1N1 836 aa20.49■□□□□ 0.87
IKBKB-213ENST00000519938 ARMT1Q9H993 441 aa20.49■□□□□ 0.87
IKBKB-213ENST00000519938 FAM13BQ9NYF5 915 aa20.49■□□□□ 0.87
IKBKB-213ENST00000519938 ZSWIM5Q9P217 1185 aa20.49■□□□□ 0.87
IKBKB-213ENST00000519938 GOLGA8AA7E2F4 631 aa20.49■□□□□ 0.87
IKBKB-213ENST00000519938 GSG1L2A8MUP6 293 aa20.49■□□□□ 0.87
IKBKB-213ENST00000519938 GTF2F1P35269 517 aaKnown RBP eCLIP20.49■□□□□ 0.87
IKBKB-213ENST00000519938 NTRK3Q16288 839 aa20.49■□□□□ 0.87
IKBKB-213ENST00000519938 AXDND1Q5T1B0 1012 aaPredicted RBP20.49■□□□□ 0.87
IKBKB-213ENST00000519938 SENP2Q9HC62 589 aa20.49■□□□□ 0.87
IKBKB-213ENST00000519938 SLC12A7Q9Y666 1083 aa20.49■□□□□ 0.87
IKBKB-213ENST00000519938 PNPLA7Q6ZV29 1317 aa20.49■□□□□ 0.87
IKBKB-213ENST00000519938 SNAP23O00161 211 aa20.48■□□□□ 0.87
IKBKB-213ENST00000519938 IFIT3O14879 490 aaKnown RBP20.48■□□□□ 0.87
IKBKB-213ENST00000519938 ZNF202O95125 648 aa20.48■□□□□ 0.87
IKBKB-213ENST00000519938 RXRAP19793 462 aa20.48■□□□□ 0.87
IKBKB-213ENST00000519938 CHAF1AQ13111 956 aaPredicted RBP20.48■□□□□ 0.87
IKBKB-213ENST00000519938 TRIM29Q14134 588 aa20.48■□□□□ 0.87
IKBKB-213ENST00000519938 MFSD6Q6ZSS7 791 aa20.48■□□□□ 0.87
IKBKB-213ENST00000519938 VPS37DQ86XT2 251 aa20.48■□□□□ 0.87
IKBKB-213ENST00000519938 NIP7Q9Y221 180 aaKnown RBP eCLIP20.48■□□□□ 0.87
IKBKB-213ENST00000519938 AHDC1Q5TGY3 1603 aaPredicted RBP20.48■□□□□ 0.87
IKBKB-213ENST00000519938 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.48■□□□□ 0.87
IKBKB-213ENST00000519938 A0A0G2JS52 829 aa20.48■□□□□ 0.87
IKBKB-213ENST00000519938 NTSR2O95665 410 aa20.48■□□□□ 0.87
IKBKB-213ENST00000519938 BCAMP50895 628 aa20.48■□□□□ 0.87
IKBKB-213ENST00000519938 CTDSPL2Q05D32 466 aa20.48■□□□□ 0.87
IKBKB-213ENST00000519938 GNL2Q13823 731 aaKnown RBP20.48■□□□□ 0.87
IKBKB-213ENST00000519938 JMYQ8N9B5 988 aa20.48■□□□□ 0.87
IKBKB-213ENST00000519938 PHKBQ93100 1093 aa20.48■□□□□ 0.87
IKBKB-213ENST00000519938 AIFM3Q96NN9 605 aa20.48■□□□□ 0.87
IKBKB-213ENST00000519938 CCDC69A6NI79 296 aa20.47■□□□□ 0.87
IKBKB-213ENST00000519938 LRMPQ12912 555 aa20.47■□□□□ 0.87
IKBKB-213ENST00000519938 MTERF4Q7Z6M4 381 aaKnown RBP20.47■□□□□ 0.87
IKBKB-213ENST00000519938 ACSBG1Q96GR2 724 aa20.47■□□□□ 0.87
IKBKB-213ENST00000519938 BPIFA3Q9BQP9 254 aa20.47■□□□□ 0.87
IKBKB-213ENST00000519938 INCENPQ9NQS7 918 aa20.47■□□□□ 0.87
IKBKB-213ENST00000519938 FAM217BQ9NTX9 383 aaPredicted RBP20.47■□□□□ 0.87
IKBKB-213ENST00000519938 DOCK2Q92608 1830 aa20.47■□□□□ 0.87
IKBKB-213ENST00000519938 STK36Q9NRP7 1315 aa20.47■□□□□ 0.87
IKBKB-213ENST00000519938 NEMFO60524 1076 aa20.47■□□□□ 0.87
IKBKB-213ENST00000519938 PPP6R2O75170 966 aa20.47■□□□□ 0.87
IKBKB-213ENST00000519938 SLC3A2P08195 630 aaKnown RBP20.47■□□□□ 0.87
IKBKB-213ENST00000519938 RBM6P78332 1123 aaKnown RBP20.47■□□□□ 0.87
IKBKB-213ENST00000519938 ROBO1Q9Y6N7 1651 aa20.47■□□□□ 0.87
IKBKB-213ENST00000519938 U2AF2P26368 475 aaKnown RBP eCLIP20.46■□□□□ 0.871e-7■■■□□ 18.2
IKBKB-213ENST00000519938 SSRP1Q08945 709 aaKnown RBP20.46■□□□□ 0.87
IKBKB-213ENST00000519938 ITPK1Q13572 414 aa20.46■□□□□ 0.87
IKBKB-213ENST00000519938 STAG1Q8WVM7 1258 aa20.46■□□□□ 0.87
IKBKB-213ENST00000519938 WASF1Q92558 559 aa20.46■□□□□ 0.87
IKBKB-213ENST00000519938 ERCC4Q92889 916 aaPredicted RBP20.46■□□□□ 0.87
IKBKB-213ENST00000519938 TIGD1Q96MW7 591 aa20.46■□□□□ 0.87
IKBKB-213ENST00000519938 MTA3Q9BTC8 594 aa20.46■□□□□ 0.87
IKBKB-213ENST00000519938 SLC4A4Q9Y6R1 1079 aa20.46■□□□□ 0.87
IKBKB-213ENST00000519938 PFKFB1P16118 471 aa20.46■□□□□ 0.87
IKBKB-213ENST00000519938 TDO2P48775 406 aa20.46■□□□□ 0.87
IKBKB-213ENST00000519938 CHRNDQ07001 517 aa20.46■□□□□ 0.87
IKBKB-213ENST00000519938 SART3Q15020 963 aaKnown RBP20.46■□□□□ 0.87
IKBKB-213ENST00000519938 CCDC144CPQ8IYA2 1237 aa20.46■□□□□ 0.87
IKBKB-213ENST00000519938 AOPEPQ8N6M6 819 aa20.46■□□□□ 0.87
IKBKB-213ENST00000519938 MARCH10Q8NA82 808 aaPredicted RBP20.46■□□□□ 0.87
IKBKB-213ENST00000519938 CCDC144BQ3MJ40 725 aa20.45■□□□□ 0.86
IKBKB-213ENST00000519938 CACTINQ8WUQ7 758 aaKnown RBP20.45■□□□□ 0.86
IKBKB-213ENST00000519938 LRP2BPQ9P2M1 347 aa20.45■□□□□ 0.86
IKBKB-213ENST00000519938 ZNF652Q9Y2D9 606 aa20.45■□□□□ 0.86
IKBKB-213ENST00000519938 A0A087WWV3 80 aa20.45■□□□□ 0.86
IKBKB-213ENST00000519938 RANBP6O60518 1105 aaKnown RBP20.45■□□□□ 0.86
IKBKB-213ENST00000519938 WDHD1O75717 1129 aaPredicted RBP20.45■□□□□ 0.86
IKBKB-213ENST00000519938 TMTC2Q8N394 836 aa20.45■□□□□ 0.86
IKBKB-213ENST00000519938 LCORLQ8N3X6 602 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms