RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 FILIP1Q7Z7B0 1213 aa7.72□□□□□ -1.17
CDH12-203ENST00000517378 SGMS1Q86VZ5 419 aa7.72□□□□□ -1.17
CDH12-203ENST00000517378 KIF18AQ8NI77 898 aa7.72□□□□□ -1.17
CDH12-203ENST00000517378 ERCC4Q92889 916 aaPredicted RBP7.72□□□□□ -1.17
CDH12-203ENST00000517378 ERO1AQ96HE7 468 aa7.72□□□□□ -1.17
CDH12-203ENST00000517378 MAP3K14Q99558 947 aa7.72□□□□□ -1.17
CDH12-203ENST00000517378 ARID3AQ99856 593 aa7.72□□□□□ -1.17
CDH12-203ENST00000517378 XPO4Q9C0E2 1151 aaKnown RBP7.72□□□□□ -1.17
CDH12-203ENST00000517378 L2HGDHQ9H9P8 463 aa7.72□□□□□ -1.17
CDH12-203ENST00000517378 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.72□□□□□ -1.17
CDH12-203ENST00000517378 WNK3Q9BYP7 1800 aa7.72□□□□□ -1.17
CDH12-203ENST00000517378 TCRBV5S4A2TA0A5A2 114 aa7.72□□□□□ -1.17
CDH12-203ENST00000517378 PPFIA3O75145 1194 aa7.72□□□□□ -1.17
CDH12-203ENST00000517378 CBX1P83916 185 aa7.72□□□□□ -1.17
CDH12-203ENST00000517378 ZRSR1Q15695 479 aaKnown RBP7.72□□□□□ -1.17
CDH12-203ENST00000517378 RESP18Q5W5W9 173 aa7.72□□□□□ -1.17
CDH12-203ENST00000517378 BRINP3Q76B58 766 aa7.72□□□□□ -1.17
CDH12-203ENST00000517378 JMYQ8N9B5 988 aa7.72□□□□□ -1.17
CDH12-203ENST00000517378 PRDM11Q9NQV5 511 aa7.72□□□□□ -1.17
CDH12-203ENST00000517378 DDX41Q9UJV9 622 aaKnown RBP7.72□□□□□ -1.17
CDH12-203ENST00000517378 CICQ96RK0 1608 aaPredicted RBP7.72□□□□□ -1.17
CDH12-203ENST00000517378 METAP2P50579 478 aaKnown RBP eCLIP7.71□□□□□ -1.17
CDH12-203ENST00000517378 CTSWP56202 376 aa7.71□□□□□ -1.17
CDH12-203ENST00000517378 TRDNQ13061 729 aa7.71□□□□□ -1.17
CDH12-203ENST00000517378 NTRK3Q16288 839 aa7.71□□□□□ -1.17
CDH12-203ENST00000517378 PI16Q6UXB8 463 aa7.71□□□□□ -1.17
CDH12-203ENST00000517378 CYB5R4Q7L1T6 521 aa7.71□□□□□ -1.17
CDH12-203ENST00000517378 VPS37DQ86XT2 251 aa7.71□□□□□ -1.17
CDH12-203ENST00000517378 TTLL11Q8NHH1 800 aa7.71□□□□□ -1.17
CDH12-203ENST00000517378 PPP1R13BQ96KQ4 1090 aa7.71□□□□□ -1.17
CDH12-203ENST00000517378 ALG1Q9BT22 464 aa7.71□□□□□ -1.17
CDH12-203ENST00000517378 FAM53CQ9NYF3 392 aa7.71□□□□□ -1.17
CDH12-203ENST00000517378 IFNKQ9P0W0 207 aa7.71□□□□□ -1.17
CDH12-203ENST00000517378 MORC2Q9Y6X9 1032 aaPredicted RBP7.71□□□□□ -1.17
CDH12-203ENST00000517378 RREB1Q92766 1687 aa7.71□□□□□ -1.17
CDH12-203ENST00000517378 PHLPP1O60346 1717 aa7.71□□□□□ -1.18
CDH12-203ENST00000517378 NPM3O75607 178 aaKnown RBP7.71□□□□□ -1.18
CDH12-203ENST00000517378 ITGA6P23229 1130 aa7.71□□□□□ -1.18
CDH12-203ENST00000517378 LIFRP42702 1097 aa7.71□□□□□ -1.18
CDH12-203ENST00000517378 CCDC93Q567U6 631 aa7.71□□□□□ -1.18
CDH12-203ENST00000517378 HSP90AB3PQ58FF7 597 aa7.71□□□□□ -1.18
CDH12-203ENST00000517378 TAF7LQ5H9L4 462 aa7.71□□□□□ -1.18
CDH12-203ENST00000517378 METTL24Q5JXM2 366 aa7.71□□□□□ -1.18
CDH12-203ENST00000517378 KRT40Q6A162 431 aa7.71□□□□□ -1.18
CDH12-203ENST00000517378 SHC4Q6S5L8 630 aa7.71□□□□□ -1.18
CDH12-203ENST00000517378 NLRP10Q86W26 655 aa7.71□□□□□ -1.18
CDH12-203ENST00000517378 ZNF397Q8NF99 534 aaPredicted RBP7.71□□□□□ -1.18
CDH12-203ENST00000517378 IGDCC4Q8TDY8 1250 aa7.71□□□□□ -1.18
CDH12-203ENST00000517378 FAM89AQ96GI7 184 aa7.71□□□□□ -1.18
CDH12-203ENST00000517378 GJB4Q9NTQ9 266 aa7.71□□□□□ -1.18
CDH12-203ENST00000517378 SLIT2O94813 1529 aa7.71□□□□□ -1.18
CDH12-203ENST00000517378 CUTAO60888 179 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 SFPQP23246 707 aaKnown RBP eCLIP7.7□□□□□ -1.18
CDH12-203ENST00000517378 CDC27P30260 824 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 SYKP43405 635 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 NKX2-3Q8TAU0 364 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 TMX1Q9H3N1 280 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 LY9Q9HBG7 655 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 PIH1D3Q9NQM4 214 aaKnown RBP7.7□□□□□ -1.18
CDH12-203ENST00000517378 FAM217BQ9NTX9 383 aaPredicted RBP7.7□□□□□ -1.18
CDH12-203ENST00000517378 TMOD3Q9NYL9 352 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 ZNF215Q9UL58 517 aaPredicted RBP7.7□□□□□ -1.18
CDH12-203ENST00000517378 DISP2A7MBM2 1401 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 UBN2Q6ZU65 1347 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 ANKRD18BA2A2Z9 1011 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 CCP110O43303 1012 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 PDE8BO95263 885 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 SMC2O95347 1197 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 SLU7O95391 586 aaKnown RBP7.7□□□□□ -1.18
CDH12-203ENST00000517378 UQCRFS1P1P0C7P4 283 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 FGFR2P21802 821 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 FANCCQ00597 558 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 MYL5Q02045 173 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 SLC9C2Q5TAH2 1124 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 CPLX2Q6PUV4 134 aaKnown RBP7.7□□□□□ -1.18
CDH12-203ENST00000517378 TMC6Q7Z403 805 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 FCHSD1Q86WN1 690 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 MTA3Q9BTC8 594 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 GREM2Q9H772 168 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 PRDM10Q9NQV6 1147 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 DLEC1Q9Y238 1755 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 PHLPP2Q6ZVD8 1323 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 ZNF532Q9HCE3 1301 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 CBFA2T2O43439 604 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 NRDCO43847 1150 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 RANBP6O60518 1105 aaKnown RBP7.7□□□□□ -1.18
CDH12-203ENST00000517378 PDE6AP16499 860 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 RCAN1P53805 252 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 NAA30Q147X3 362 aaPredicted RBP7.7□□□□□ -1.18
CDH12-203ENST00000517378 LDHAL6AQ6ZMR3 332 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 ZNF592Q92610 1267 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 AK7Q96M32 723 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 STRBPQ96SI9 672 aaKnown RBP7.7□□□□□ -1.18
CDH12-203ENST00000517378 DENND2AQ9ULE3 1009 aa7.7□□□□□ -1.18
CDH12-203ENST00000517378 A0A1B0GUL6 1792 aa7.69□□□□□ -1.18
CDH12-203ENST00000517378 BCL9O00512 1426 aa7.69□□□□□ -1.18
CDH12-203ENST00000517378 ZBTB43O43298 467 aa7.69□□□□□ -1.18
CDH12-203ENST00000517378 KIF20AO95235 890 aa7.69□□□□□ -1.18
CDH12-203ENST00000517378 FMNL1O95466 1100 aaPredicted RBP7.69□□□□□ -1.18
CDH12-203ENST00000517378 STARD3NLO95772 234 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms