RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 SLFN14P0C7P3 912 aa5.75□□□□□ -1.49
RNU4-49P-201ENST00000516080 ADMP35318 185 aa5.75□□□□□ -1.49
RNU4-49P-201ENST00000516080 PPP2R3AQ06190 1150 aa5.75□□□□□ -1.49
RNU4-49P-201ENST00000516080 MSMPQ1L6U9 139 aa5.75□□□□□ -1.49
RNU4-49P-201ENST00000516080 DTHD1Q6ZMT9 781 aa5.75□□□□□ -1.49
RNU4-49P-201ENST00000516080 TMC7Q7Z402 723 aa5.75□□□□□ -1.49
RNU4-49P-201ENST00000516080 WDR18Q9BV38 432 aa5.75□□□□□ -1.49
RNU4-49P-201ENST00000516080 FAM105AQ9NUU6 356 aa5.75□□□□□ -1.49
RNU4-49P-201ENST00000516080 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.74□□□□□ -1.49
RNU4-49P-201ENST00000516080 PRNPP04156 253 aa5.74□□□□□ -1.49
RNU4-49P-201ENST00000516080 PLCB3Q01970 1234 aa5.74□□□□□ -1.49
RNU4-49P-201ENST00000516080 FAAP100Q0VG06 881 aa5.74□□□□□ -1.49
RNU4-49P-201ENST00000516080 GATA6Q92908 595 aa5.74□□□□□ -1.49
RNU4-49P-201ENST00000516080 KRT82Q9NSB4 513 aa5.74□□□□□ -1.49
RNU4-49P-201ENST00000516080 TMEM39AQ9NV64 488 aa5.74□□□□□ -1.49
RNU4-49P-201ENST00000516080 BSDC1Q9NW68 430 aaPredicted RBP5.74□□□□□ -1.49
RNU4-49P-201ENST00000516080 FAM170BA6NMN3 283 aa5.73□□□□□ -1.49
RNU4-49P-201ENST00000516080 GSTP1P09211 210 aaKnown RBP5.73□□□□□ -1.49
RNU4-49P-201ENST00000516080 ZNF157P51786 506 aaPredicted RBP5.73□□□□□ -1.49
RNU4-49P-201ENST00000516080 FCGRTP55899 365 aa5.73□□□□□ -1.49
RNU4-49P-201ENST00000516080 VSIG10LQ86VR7 867 aa5.73□□□□□ -1.49
RNU4-49P-201ENST00000516080 SHISA5Q8N114 240 aa5.73□□□□□ -1.49
RNU4-49P-201ENST00000516080 FBXL18Q96ME1 805 aa5.73□□□□□ -1.49
RNU4-49P-201ENST00000516080 BCO2Q9BYV7 579 aa5.73□□□□□ -1.49
RNU4-49P-201ENST00000516080 ATXN3LQ9H3M9 355 aa5.73□□□□□ -1.49
RNU4-49P-201ENST00000516080 CCDC86Q9H6F5 360 aaKnown RBP5.73□□□□□ -1.49
RNU4-49P-201ENST00000516080 PPP1R9AQ9ULJ8 1098 aa5.73□□□□□ -1.49
RNU4-49P-201ENST00000516080 DAGLAQ9Y4D2 1042 aa5.73□□□□□ -1.49
RNU4-49P-201ENST00000516080 KRTAP9-6A0A140TA67 174 aa5.72□□□□□ -1.49
RNU4-49P-201ENST00000516080 TREHO43280 583 aa5.72□□□□□ -1.49
RNU4-49P-201ENST00000516080 TAL1P17542 331 aaPredicted RBP5.72□□□□□ -1.49
RNU4-49P-201ENST00000516080 LIG1P18858 919 aa5.72□□□□□ -1.49
RNU4-49P-201ENST00000516080 MAPK1P28482 360 aa5.72□□□□□ -1.49
RNU4-49P-201ENST00000516080 ID3Q02535 119 aa5.72□□□□□ -1.49
RNU4-49P-201ENST00000516080 DSC3Q14574 896 aa5.72□□□□□ -1.49
RNU4-49P-201ENST00000516080 ENOX2Q16206 610 aaKnown RBP5.72□□□□□ -1.49
RNU4-49P-201ENST00000516080 KIF4BQ2VIQ3 1234 aa5.72□□□□□ -1.49
RNU4-49P-201ENST00000516080 SEZ6L2Q6UXD5 910 aa5.72□□□□□ -1.49
RNU4-49P-201ENST00000516080 PIDD1Q9HB75 910 aa5.72□□□□□ -1.49
RNU4-49P-201ENST00000516080 C1GALT1Q9NS00 363 aa5.72□□□□□ -1.49
RNU4-49P-201ENST00000516080 CRIM1Q9NZV1 1036 aa5.72□□□□□ -1.49
RNU4-49P-201ENST00000516080 CCDC39Q9UFE4 941 aa5.72□□□□□ -1.49
RNU4-49P-201ENST00000516080 GPN3Q9UHW5 284 aaPredicted RBP5.72□□□□□ -1.49
RNU4-49P-201ENST00000516080 PNMA6FA0A0J9YX94 578 aa5.71□□□□□ -1.5
RNU4-49P-201ENST00000516080 TMPRSS2O15393 492 aa5.71□□□□□ -1.5
RNU4-49P-201ENST00000516080 TXKP42681 527 aa5.71□□□□□ -1.5
RNU4-49P-201ENST00000516080 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.71□□□□□ -1.5
RNU4-49P-201ENST00000516080 CYP27C1Q4G0S4 372 aa5.71□□□□□ -1.5
RNU4-49P-201ENST00000516080 OGFOD3Q6PK18 319 aa5.71□□□□□ -1.5
RNU4-49P-201ENST00000516080 PI16Q6UXB8 463 aa5.71□□□□□ -1.5
RNU4-49P-201ENST00000516080 ZNF765Q7L2R6 523 aa5.71□□□□□ -1.5
RNU4-49P-201ENST00000516080 ZC3H12CQ9C0D7 883 aaKnown RBP5.71□□□□□ -1.5
RNU4-49P-201ENST00000516080 LRRC4CQ9HCJ2 640 aa5.71□□□□□ -1.5
RNU4-49P-201ENST00000516080 DYNC1LI2O43237 492 aaPredicted RBP5.7□□□□□ -1.5
RNU4-49P-201ENST00000516080 ZNF862O60290 1169 aa5.7□□□□□ -1.5
RNU4-49P-201ENST00000516080 ZSCAN29Q8IWY8 852 aaPredicted RBP5.7□□□□□ -1.5
RNU4-49P-201ENST00000516080 FBF1Q8TES7 1133 aa5.7□□□□□ -1.5
RNU4-49P-201ENST00000516080 WDR89Q96FK6 387 aaPredicted RBP5.7□□□□□ -1.5
RNU4-49P-201ENST00000516080 FANCD2OSQ96PS1 177 aa5.7□□□□□ -1.5
RNU4-49P-201ENST00000516080 EMILIN2Q9BXX0 1053 aa5.7□□□□□ -1.5
RNU4-49P-201ENST00000516080 ADGRE2Q9UHX3 823 aa5.7□□□□□ -1.5
RNU4-49P-201ENST00000516080 TIMELESSQ9UNS1 1208 aa5.7□□□□□ -1.5
RNU4-49P-201ENST00000516080 AKAP2Q9Y2D5 859 aa5.7□□□□□ -1.5
RNU4-49P-201ENST00000516080 ARNTP27540 789 aa5.69□□□□□ -1.5
RNU4-49P-201ENST00000516080 NXPE4Q6UWF7 544 aa5.69□□□□□ -1.5
RNU4-49P-201ENST00000516080 PDZD3Q86UT5 571 aa5.69□□□□□ -1.5
RNU4-49P-201ENST00000516080 SULF2Q8IWU5 870 aa5.69□□□□□ -1.5
RNU4-49P-201ENST00000516080 SMYD4Q8IYR2 804 aaPredicted RBP5.69□□□□□ -1.5
RNU4-49P-201ENST00000516080 ABI1Q8IZP0 508 aa5.69□□□□□ -1.5
RNU4-49P-201ENST00000516080 KCNB2Q92953 911 aa5.69□□□□□ -1.5
RNU4-49P-201ENST00000516080 FMNL2Q96PY5 1086 aa5.69□□□□□ -1.5
RNU4-49P-201ENST00000516080 SRCIN1Q9C0H9 1055 aa5.69□□□□□ -1.5
RNU4-49P-201ENST00000516080 DISC1Q9NRI5 854 aa5.69□□□□□ -1.5
RNU4-49P-201ENST00000516080 GIPC1O14908 333 aa5.68□□□□□ -1.5
RNU4-49P-201ENST00000516080 NME2P22392 152 aa5.68□□□□□ -1.5
RNU4-49P-201ENST00000516080 GSTT1P30711 240 aa5.68□□□□□ -1.5
RNU4-49P-201ENST00000516080 KCNA1Q09470 495 aa5.68□□□□□ -1.5
RNU4-49P-201ENST00000516080 TP53INP2Q8IXH6 220 aa5.68□□□□□ -1.5
RNU4-49P-201ENST00000516080 AGBL5Q8NDL9 886 aa5.68□□□□□ -1.5
RNU4-49P-201ENST00000516080 CEP44Q9C0F1 390 aa5.68□□□□□ -1.5
RNU4-49P-201ENST00000516080 GOLGA2P5Q9HBQ8 144 aa5.68□□□□□ -1.5
RNU4-49P-201ENST00000516080 LGR6Q9HBX8 967 aa5.68□□□□□ -1.5
RNU4-49P-201ENST00000516080 ZC3H7BQ9UGR2 993 aaKnown RBP5.68□□□□□ -1.5
RNU4-49P-201ENST00000516080 SAMM50Q9Y512 469 aa5.68□□□□□ -1.5
RNU4-49P-201ENST00000516080 PCDHGC5Q9Y5F6 944 aa5.68□□□□□ -1.5
RNU4-49P-201ENST00000516080 TTLL4Q14679 1199 aa5.67□□□□□ -1.5
RNU4-49P-201ENST00000516080 ALG1LQ6GMV1 187 aa5.67□□□□□ -1.5
RNU4-49P-201ENST00000516080 STK11IPQ8N1F8 1099 aa5.67□□□□□ -1.5
RNU4-49P-201ENST00000516080 C3orf58Q8NDZ4 430 aa5.67□□□□□ -1.5
RNU4-49P-201ENST00000516080 FLCNQ8NFG4 579 aa5.67□□□□□ -1.5
RNU4-49P-201ENST00000516080 KRTAP4-12Q9BQ66 201 aa5.67□□□□□ -1.5
RNU4-49P-201ENST00000516080 PCOLCE2Q9UKZ9 415 aa5.67□□□□□ -1.5
RNU4-49P-201ENST00000516080 PPM1HQ9ULR3 514 aa5.67□□□□□ -1.5
RNU4-49P-201ENST00000516080 RNGTTO60942 597 aaKnown RBP5.66□□□□□ -1.5
RNU4-49P-201ENST00000516080 FAM87AP0C7U9 286 aa5.66□□□□□ -1.5
RNU4-49P-201ENST00000516080 MAPK8P45983 427 aa5.66□□□□□ -1.5
RNU4-49P-201ENST00000516080 ERVK-24P63145 666 aa5.66□□□□□ -1.5
RNU4-49P-201ENST00000516080 ATP2B2Q01814 1243 aa5.66□□□□□ -1.5
RNU4-49P-201ENST00000516080 FMR1Q06787 632 aaKnown RBP eCLIP5.66□□□□□ -1.5
RNU4-49P-201ENST00000516080 CDK5R2Q13319 367 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms