RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 SHC4Q6S5L8 630 aa19.43■□□□□ 0.7
TSPAN17-209ENST00000515708 TBC1D10CQ8IV04 446 aa19.43■□□□□ 0.7
TSPAN17-209ENST00000515708 TNS2Q63HR2 1409 aa19.43■□□□□ 0.7
TSPAN17-209ENST00000515708 CDKL5O76039 1030 aa19.43■□□□□ 0.7
TSPAN17-209ENST00000515708 CSF1RP07333 972 aa19.43■□□□□ 0.7
TSPAN17-209ENST00000515708 TRIM28Q13263 835 aaKnown RBP19.43■□□□□ 0.7
TSPAN17-209ENST00000515708 PTPAQ15257 358 aa19.43■□□□□ 0.7
TSPAN17-209ENST00000515708 CYB5R4Q7L1T6 521 aa19.43■□□□□ 0.7
TSPAN17-209ENST00000515708 KRT222Q8N1A0 295 aa19.43■□□□□ 0.7
TSPAN17-209ENST00000515708 SYTL4Q96C24 671 aaPredicted RBP19.43■□□□□ 0.7
TSPAN17-209ENST00000515708 PLA2G12BQ9BX93 195 aa19.43■□□□□ 0.7
TSPAN17-209ENST00000515708 AKAP11Q9UKA4 1901 aa19.42■□□□□ 0.7
TSPAN17-209ENST00000515708 SPATA31A3Q5VYP0 1347 aa19.42■□□□□ 0.7
TSPAN17-209ENST00000515708 SH2B2O14492 632 aaPredicted RBP19.42■□□□□ 0.7
TSPAN17-209ENST00000515708 PCCAP05165 728 aaPredicted RBP19.42■□□□□ 0.7
TSPAN17-209ENST00000515708 RXRAP19793 462 aa19.42■□□□□ 0.7
TSPAN17-209ENST00000515708 ADD2P35612 726 aa19.42■□□□□ 0.7
TSPAN17-209ENST00000515708 CCDC93Q567U6 631 aa19.42■□□□□ 0.7
TSPAN17-209ENST00000515708 JMYQ8N9B5 988 aa19.42■□□□□ 0.7
TSPAN17-209ENST00000515708 ZNF330Q9Y3S2 320 aaPredicted RBP19.42■□□□□ 0.7
TSPAN17-209ENST00000515708 TUBB4AP04350 444 aa19.42■□□□□ 0.7
TSPAN17-209ENST00000515708 MYL5Q02045 173 aa19.42■□□□□ 0.7
TSPAN17-209ENST00000515708 NKX1-1Q15270 411 aaPredicted RBP19.42■□□□□ 0.7
TSPAN17-209ENST00000515708 APOA5Q6Q788 366 aa19.42■□□□□ 0.7
TSPAN17-209ENST00000515708 BRINP3Q76B58 766 aa19.42■□□□□ 0.7
TSPAN17-209ENST00000515708 WDR17Q8IZU2 1322 aa19.41■□□□□ 0.7
TSPAN17-209ENST00000515708 XIRP1Q702N8 1843 aaKnown RBP19.41■□□□□ 0.7
TSPAN17-209ENST00000515708 FAM237AA0A1B0GTK4 181 aa19.41■□□□□ 0.7
TSPAN17-209ENST00000515708 CDC27P30260 824 aa19.41■□□□□ 0.7
TSPAN17-209ENST00000515708 PNOCQ13519 176 aa19.41■□□□□ 0.7
TSPAN17-209ENST00000515708 SLC9C2Q5TAH2 1124 aa19.41■□□□□ 0.7
TSPAN17-209ENST00000515708 PHKBQ93100 1093 aa19.41■□□□□ 0.7
TSPAN17-209ENST00000515708 MAP3K14Q99558 947 aa19.41■□□□□ 0.7
TSPAN17-209ENST00000515708 FAM53CQ9NYF3 392 aa19.41■□□□□ 0.7
TSPAN17-209ENST00000515708 ATRNO75882 1429 aa19.41■□□□□ 0.7
TSPAN17-209ENST00000515708 UBASH3AP57075 661 aa19.41■□□□□ 0.7
TSPAN17-209ENST00000515708 METTL24Q5JXM2 366 aa19.41■□□□□ 0.7
TSPAN17-209ENST00000515708 ZBTB38Q8NAP3 1195 aaPredicted RBP19.41■□□□□ 0.7
TSPAN17-209ENST00000515708 DPF2Q92785 391 aa19.41■□□□□ 0.7
TSPAN17-209ENST00000515708 RIPOR2Q9Y4F9 1068 aa19.41■□□□□ 0.7
TSPAN17-209ENST00000515708 GNL2Q13823 731 aaKnown RBP19.4■□□□□ 0.7
TSPAN17-209ENST00000515708 RESP18Q5W5W9 173 aa19.4■□□□□ 0.7
TSPAN17-209ENST00000515708 CPLX2Q6PUV4 134 aaKnown RBP19.4■□□□□ 0.7
TSPAN17-209ENST00000515708 TOM1L2Q6ZVM7 507 aa19.4■□□□□ 0.7
TSPAN17-209ENST00000515708 SENP2Q9HC62 589 aa19.4■□□□□ 0.7
TSPAN17-209ENST00000515708 NPHP1O15259 732 aa19.4■□□□□ 0.7
TSPAN17-209ENST00000515708 ERCC6LQ2NKX8 1250 aa19.4■□□□□ 0.7
TSPAN17-209ENST00000515708 MICU3Q86XE3 530 aa19.4■□□□□ 0.7
TSPAN17-209ENST00000515708 LRRN4CLQ8ND94 238 aa19.4■□□□□ 0.7
TSPAN17-209ENST00000515708 CBFA2T2O43439 604 aa19.39■□□□□ 0.69
TSPAN17-209ENST00000515708 SERPINC1P01008 464 aa19.39■□□□□ 0.69
TSPAN17-209ENST00000515708 ETF1P62495 437 aaKnown RBP19.39■□□□□ 0.69
TSPAN17-209ENST00000515708 HOMER1Q86YM7 354 aa19.39■□□□□ 0.69
TSPAN17-209ENST00000515708 CLIC6Q96NY7 704 aa19.39■□□□□ 0.69
TSPAN17-209ENST00000515708 TAOK2Q9UL54 1235 aa19.39■□□□□ 0.69
TSPAN17-209ENST00000515708 ECM29Q5VYK3 1845 aa19.39■□□□□ 0.69
TSPAN17-209ENST00000515708 B4E1Z4 1266 aa19.39■□□□□ 0.69
TSPAN17-209ENST00000515708 CCP110O43303 1012 aa19.39■□□□□ 0.69
TSPAN17-209ENST00000515708 APPP05067 770 aa19.39■□□□□ 0.69
TSPAN17-209ENST00000515708 H2AFXP16104 143 aaPredicted RBP19.39■□□□□ 0.69
TSPAN17-209ENST00000515708 NTRK3Q16288 839 aa19.39■□□□□ 0.69
TSPAN17-209ENST00000515708 LDHAL6AQ6ZMR3 332 aa19.39■□□□□ 0.69
TSPAN17-209ENST00000515708 METTL16Q86W50 562 aaKnown RBP19.39■□□□□ 0.69
TSPAN17-209ENST00000515708 BBXQ8WY36 941 aaPredicted RBP19.39■□□□□ 0.69
TSPAN17-209ENST00000515708 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.39■□□□□ 0.69
TSPAN17-209ENST00000515708 ZNF446Q9NWS9 450 aa19.39■□□□□ 0.69
TSPAN17-209ENST00000515708 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.39■□□□□ 0.69
TSPAN17-209ENST00000515708 SLFN14P0C7P3 912 aa19.38■□□□□ 0.69
TSPAN17-209ENST00000515708 TTF1Q15361 905 aaPredicted RBP19.38■□□□□ 0.69
TSPAN17-209ENST00000515708 CFAP100Q494V2 611 aa19.38■□□□□ 0.69
TSPAN17-209ENST00000515708 ZNF771Q7L3S4 317 aaPredicted RBP19.38■□□□□ 0.69
TSPAN17-209ENST00000515708 ZNF512BQ96KM6 892 aaPredicted RBP19.38■□□□□ 0.69
TSPAN17-209ENST00000515708 TMX1Q9H3N1 280 aa19.38■□□□□ 0.69
TSPAN17-209ENST00000515708 PIH1D3Q9NQM4 214 aaKnown RBP19.38■□□□□ 0.69
TSPAN17-209ENST00000515708 ZBTB43O43298 467 aa19.37■□□□□ 0.69
TSPAN17-209ENST00000515708 IDH1O75874 414 aaKnown RBP19.37■□□□□ 0.69
TSPAN17-209ENST00000515708 UBE3CQ15386 1083 aa19.37■□□□□ 0.69
TSPAN17-209ENST00000515708 KIF6Q6ZMV9 814 aa19.37■□□□□ 0.69
TSPAN17-209ENST00000515708 SYNE4Q8N205 404 aa19.37■□□□□ 0.69
TSPAN17-209ENST00000515708 IGDCC4Q8TDY8 1250 aa19.37■□□□□ 0.69
TSPAN17-209ENST00000515708 TMEM87BQ96K49 555 aa19.37■□□□□ 0.69
TSPAN17-209ENST00000515708 MYO5AQ9Y4I1 1855 aaKnown RBP19.37■□□□□ 0.69
TSPAN17-209ENST00000515708 PHLPP2Q6ZVD8 1323 aa19.37■□□□□ 0.69
TSPAN17-209ENST00000515708 RANBP6O60518 1105 aaKnown RBP19.37■□□□□ 0.69
TSPAN17-209ENST00000515708 CUTAO60888 179 aa19.37■□□□□ 0.69
TSPAN17-209ENST00000515708 ITGA6P23229 1130 aa19.37■□□□□ 0.69
TSPAN17-209ENST00000515708 IARSP41252 1262 aaKnown RBP19.37■□□□□ 0.69
TSPAN17-209ENST00000515708 LONRF3Q496Y0 759 aa19.37■□□□□ 0.69
TSPAN17-209ENST00000515708 FOXP4Q8IVH2 680 aaPredicted RBP19.37■□□□□ 0.69
TSPAN17-209ENST00000515708 VSTM4Q8IW00 320 aa19.37■□□□□ 0.69
TSPAN17-209ENST00000515708 UBN2Q6ZU65 1347 aa19.37■□□□□ 0.69
TSPAN17-209ENST00000515708 TRIM29Q14134 588 aa19.36■□□□□ 0.69
TSPAN17-209ENST00000515708 CCDC102BQ68D86 513 aa19.36■□□□□ 0.69
TSPAN17-209ENST00000515708 OLFM4Q6UX06 510 aa19.36■□□□□ 0.69
TSPAN17-209ENST00000515708 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.36■□□□□ 0.69
TSPAN17-209ENST00000515708 GREM2Q9H772 168 aa19.36■□□□□ 0.69
TSPAN17-209ENST00000515708 PRDM11Q9NQV5 511 aa19.36■□□□□ 0.69
TSPAN17-209ENST00000515708 FAM217BQ9NTX9 383 aaPredicted RBP19.36■□□□□ 0.69
TSPAN17-209ENST00000515708 DNAI1Q9UI46 699 aa19.36■□□□□ 0.69
TSPAN17-209ENST00000515708 KCNH3Q9ULD8 1083 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms