RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 FAM205AQ6ZU69 1335 aa13.67□□□□□ -0.22
UBE2D3-232ENST00000514755 ADM5C9JUS6 153 aa13.67□□□□□ -0.22
UBE2D3-232ENST00000514755 IFIT1P09914 478 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-232ENST00000514755 SLC5A1P13866 664 aa13.67□□□□□ -0.22
UBE2D3-232ENST00000514755 ADORA1P30542 326 aa13.67□□□□□ -0.22
UBE2D3-232ENST00000514755 TIMM10P62072 90 aa13.67□□□□□ -0.22
UBE2D3-232ENST00000514755 CAVIN4Q5BKX8 364 aa13.67□□□□□ -0.22
UBE2D3-232ENST00000514755 ANGEL2Q5VTE6 544 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-232ENST00000514755 CST9Q5W186 159 aa13.67□□□□□ -0.22
UBE2D3-232ENST00000514755 CEP85Q6P2H3 762 aa13.67□□□□□ -0.22
UBE2D3-232ENST00000514755 SSH3Q8TE77 659 aa13.67□□□□□ -0.22
UBE2D3-232ENST00000514755 COL1A1P02452 1464 aaPredicted RBP13.67□□□□□ -0.22
UBE2D3-232ENST00000514755 AOX1Q06278 1338 aa13.66□□□□□ -0.22
UBE2D3-232ENST00000514755 TMEM88BA6NKF7 163 aa13.66□□□□□ -0.22
UBE2D3-232ENST00000514755 WNT10BO00744 389 aa13.66□□□□□ -0.22
UBE2D3-232ENST00000514755 CHAF1AQ13111 956 aaPredicted RBP13.66□□□□□ -0.22
UBE2D3-232ENST00000514755 TSR1Q2NL82 804 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-232ENST00000514755 MFSD14BQ5SR56 506 aa13.66□□□□□ -0.22
UBE2D3-232ENST00000514755 CDC37L1Q7L3B6 337 aa13.66□□□□□ -0.22
UBE2D3-232ENST00000514755 VPS37DQ86XT2 251 aa13.66□□□□□ -0.22
UBE2D3-232ENST00000514755 KLRG1Q96E93 195 aa13.66□□□□□ -0.22
UBE2D3-232ENST00000514755 TRPM7Q96QT4 1865 aa13.65□□□□□ -0.22
UBE2D3-232ENST00000514755 ARAP2Q8WZ64 1704 aa13.65□□□□□ -0.22
UBE2D3-232ENST00000514755 ZMYND10O75800 440 aa13.65□□□□□ -0.22
UBE2D3-232ENST00000514755 MS4A1P11836 297 aa13.65□□□□□ -0.22
UBE2D3-232ENST00000514755 PHKA1P46020 1223 aa13.65□□□□□ -0.22
UBE2D3-232ENST00000514755 FKBP1AP62942 108 aaKnown RBP13.65□□□□□ -0.22
UBE2D3-232ENST00000514755 PTGDRQ13258 359 aa13.65□□□□□ -0.22
UBE2D3-232ENST00000514755 VARS2Q5ST30 1063 aaKnown RBP13.65□□□□□ -0.22
UBE2D3-232ENST00000514755 C6orf132Q5T0Z8 1188 aa13.65□□□□□ -0.22
UBE2D3-232ENST00000514755 KRT26Q7Z3Y9 468 aa13.65□□□□□ -0.22
UBE2D3-232ENST00000514755 OGFOD1Q8N543 542 aa13.65□□□□□ -0.22
UBE2D3-232ENST00000514755 DCPSQ96C86 337 aaKnown RBP13.65□□□□□ -0.22
UBE2D3-232ENST00000514755 ZBED3Q96IU2 234 aaPredicted RBP13.65□□□□□ -0.22
UBE2D3-232ENST00000514755 CDHR5Q9HBB8 845 aa13.65□□□□□ -0.22
UBE2D3-232ENST00000514755 MKRN1Q9UHC7 482 aaKnown RBP13.65□□□□□ -0.22
UBE2D3-232ENST00000514755 A0A1B0GUL7 405 aa13.64□□□□□ -0.23
UBE2D3-232ENST00000514755 CELF2O95319 508 aaKnown RBP13.64□□□□□ -0.23
UBE2D3-232ENST00000514755 G3BP1Q13283 466 aaKnown RBP eCLIP13.64□□□□□ -0.23
UBE2D3-232ENST00000514755 ZNF408Q9H9D4 720 aa13.64□□□□□ -0.23
UBE2D3-232ENST00000514755 ZBTB40Q9NUA8 1239 aa13.64□□□□□ -0.23
UBE2D3-232ENST00000514755 HDAC9Q9UKV0 1011 aa13.64□□□□□ -0.23
UBE2D3-232ENST00000514755 DDX19BQ9UMR2 479 aa13.64□□□□□ -0.23
UBE2D3-232ENST00000514755 MYH13Q9UKX3 1938 aa13.63□□□□□ -0.23
UBE2D3-232ENST00000514755 FRAT2O75474 233 aaPredicted RBP13.63□□□□□ -0.23
UBE2D3-232ENST00000514755 SURF6O75683 361 aaKnown RBP13.63□□□□□ -0.23
UBE2D3-232ENST00000514755 CFAP100Q494V2 611 aa13.63□□□□□ -0.23
UBE2D3-232ENST00000514755 PRAMEF18Q5VWM3 479 aa13.63□□□□□ -0.23
UBE2D3-232ENST00000514755 CCDC102BQ68D86 513 aa13.63□□□□□ -0.23
UBE2D3-232ENST00000514755 SIRT2Q8IXJ6 389 aa13.63□□□□□ -0.23
UBE2D3-232ENST00000514755 XAGE2Q96GT9 111 aa13.63□□□□□ -0.23
UBE2D3-232ENST00000514755 NPDC1Q9NQX5 325 aaPredicted RBP13.63□□□□□ -0.23
UBE2D3-232ENST00000514755 TTF2Q9UNY4 1162 aaKnown RBP13.63□□□□□ -0.23
UBE2D3-232ENST00000514755 PDE3AQ14432 1141 aa13.62□□□□□ -0.23
UBE2D3-232ENST00000514755 PRMT6Q96LA8 375 aaPredicted RBP13.62□□□□□ -0.23
UBE2D3-232ENST00000514755 NEUROD6Q96NK8 337 aa13.62□□□□□ -0.23
UBE2D3-232ENST00000514755 ABT1Q9ULW3 272 aaKnown RBP13.62□□□□□ -0.23
UBE2D3-232ENST00000514755 NOP58Q9Y2X3 529 aaKnown RBP13.62□□□□□ -0.23
UBE2D3-232ENST00000514755 CNTNAP1P78357 1384 aa13.61□□□□□ -0.23
UBE2D3-232ENST00000514755 HIC1Q14526 733 aa13.61□□□□□ -0.23
UBE2D3-232ENST00000514755 DLGAP5Q15398 846 aa13.61□□□□□ -0.23
UBE2D3-232ENST00000514755 SULF1Q8IWU6 871 aa13.61□□□□□ -0.23
UBE2D3-232ENST00000514755 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.61□□□□□ -0.23
UBE2D3-232ENST00000514755 MTMR14Q8NCE2 650 aa13.61□□□□□ -0.23
UBE2D3-232ENST00000514755 CDCA5Q96FF9 252 aa13.61□□□□□ -0.23
UBE2D3-232ENST00000514755 EXOC6BQ9Y2D4 811 aa13.61□□□□□ -0.23
UBE2D3-232ENST00000514755 AKAP2Q9Y2D5 859 aa13.61□□□□□ -0.23
UBE2D3-232ENST00000514755 TLL2Q9Y6L7 1015 aa13.61□□□□□ -0.23
UBE2D3-232ENST00000514755 PITPNM2Q9BZ72 1349 aa13.61□□□□□ -0.23
UBE2D3-232ENST00000514755 CLRN2A0PK11 232 aa13.6□□□□□ -0.23
UBE2D3-232ENST00000514755 RASSF10A6NK89 507 aa13.6□□□□□ -0.23
UBE2D3-232ENST00000514755 RBM5P52756 815 aaKnown RBP eCLIP13.6□□□□□ -0.23
UBE2D3-232ENST00000514755 RRP1P56182 461 aaKnown RBP13.6□□□□□ -0.23
UBE2D3-232ENST00000514755 OS9Q13438 667 aaPredicted RBP13.6□□□□□ -0.23
UBE2D3-232ENST00000514755 ECM29Q5VYK3 1845 aa13.6□□□□□ -0.23
UBE2D3-232ENST00000514755 FAM205CA6NFA0 338 aa13.59□□□□□ -0.23
UBE2D3-232ENST00000514755 PRDX5P30044 214 aa13.59□□□□□ -0.23
UBE2D3-232ENST00000514755 CRKP46108 304 aa13.59□□□□□ -0.23
UBE2D3-232ENST00000514755 VEGFBP49765 207 aa13.59□□□□□ -0.23
UBE2D3-232ENST00000514755 MMP14P50281 582 aa13.59□□□□□ -0.23
UBE2D3-232ENST00000514755 RASGRF1Q13972 1273 aa13.59□□□□□ -0.23
UBE2D3-232ENST00000514755 DEFB115Q30KQ5 88 aa13.59□□□□□ -0.23
UBE2D3-232ENST00000514755 TNNI3KQ59H18 835 aa13.59□□□□□ -0.23
UBE2D3-232ENST00000514755 PI16Q6UXB8 463 aa13.59□□□□□ -0.23
UBE2D3-232ENST00000514755 SAPCD2Q86UD0 394 aa13.59□□□□□ -0.23
UBE2D3-232ENST00000514755 JMYQ8N9B5 988 aa13.59□□□□□ -0.23
UBE2D3-232ENST00000514755 TBC1D22AQ8WUA7 517 aa13.59□□□□□ -0.23
UBE2D3-232ENST00000514755 DBNDD2Q9BQY9 259 aa13.59□□□□□ -0.23
UBE2D3-232ENST00000514755 SERPINA10Q9UK55 444 aa13.59□□□□□ -0.23
UBE2D3-232ENST00000514755 FPGT-TNNI3KV9GXZ4 949 aa13.59□□□□□ -0.23
UBE2D3-232ENST00000514755 PTPREP23469 700 aa13.58□□□□□ -0.24
UBE2D3-232ENST00000514755 CYP4F22Q6NT55 531 aa13.58□□□□□ -0.24
UBE2D3-232ENST00000514755 MOB2Q70IA6 237 aa13.58□□□□□ -0.24
UBE2D3-232ENST00000514755 RPAP2Q8IXW5 612 aaPredicted RBP13.58□□□□□ -0.24
UBE2D3-232ENST00000514755 WDR66Q8TBY9 1149 aa13.58□□□□□ -0.24
UBE2D3-232ENST00000514755 TDRD3Q9H7E2 651 aaKnown RBP13.58□□□□□ -0.24
UBE2D3-232ENST00000514755 GNL3LQ9NVN8 582 aaKnown RBP13.58□□□□□ -0.24
UBE2D3-232ENST00000514755 TLR7Q9NYK1 1049 aaKnown RBP13.58□□□□□ -0.24
UBE2D3-232ENST00000514755 DENND2AQ9ULE3 1009 aa13.58□□□□□ -0.24
UBE2D3-232ENST00000514755 EAF2Q96CJ1 260 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms