RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 NOL10Q9BSC4 688 aaKnown RBP12.26□□□□□ -0.45
NEDD9-214ENST00000513989 MRIQ9BWK5 157 aa12.26□□□□□ -0.45
NEDD9-214ENST00000513989 TNRC18O15417 2968 aaPredicted RBP12.26□□□□□ -0.45
NEDD9-214ENST00000513989 H7C1D1 291 aa12.25□□□□□ -0.45
NEDD9-214ENST00000513989 USP17L8P0C7I0 530 aa12.25□□□□□ -0.45
NEDD9-214ENST00000513989 SDSP20132 328 aa12.25□□□□□ -0.45
NEDD9-214ENST00000513989 NAA16Q6N069 864 aaPredicted RBP12.25□□□□□ -0.45
NEDD9-214ENST00000513989 SKAP1Q86WV1 359 aa12.25□□□□□ -0.45
NEDD9-214ENST00000513989 ANTXR1Q9H6X2 564 aa12.25□□□□□ -0.45
NEDD9-214ENST00000513989 PIH1D3Q9NQM4 214 aaKnown RBP12.25□□□□□ -0.45
NEDD9-214ENST00000513989 TTF2Q9UNY4 1162 aaKnown RBP12.25□□□□□ -0.45
NEDD9-214ENST00000513989 NDUFB9Q9Y6M9 179 aa12.25□□□□□ -0.45
NEDD9-214ENST00000513989 F8W031 263 aaPredicted RBP12.24□□□□□ -0.45
NEDD9-214ENST00000513989 RNF113AO15541 343 aaKnown RBP12.24□□□□□ -0.45
NEDD9-214ENST00000513989 ASTN2O75129 1339 aaPredicted RBP12.24□□□□□ -0.45
NEDD9-214ENST00000513989 BAG3O95817 575 aa12.24□□□□□ -0.45
NEDD9-214ENST00000513989 ECE1P42892 770 aa12.24□□□□□ -0.45
NEDD9-214ENST00000513989 RBM5P52756 815 aaKnown RBP eCLIP12.24□□□□□ -0.451e-19■■■■■ 58.1
NEDD9-214ENST00000513989 HDLBPQ00341 1268 aaKnown RBP12.24□□□□□ -0.45
NEDD9-214ENST00000513989 GRM1Q13255 1194 aa12.24□□□□□ -0.45
NEDD9-214ENST00000513989 TBC1D10BQ4KMP7 808 aaPredicted RBP12.24□□□□□ -0.45
NEDD9-214ENST00000513989 PAXIP1Q6ZW49 1069 aaPredicted RBP12.24□□□□□ -0.45
NEDD9-214ENST00000513989 CDC37L1Q7L3B6 337 aa12.24□□□□□ -0.45
NEDD9-214ENST00000513989 CERS3Q8IU89 383 aa12.24□□□□□ -0.45
NEDD9-214ENST00000513989 KIAA0825Q8IV33 1275 aa12.24□□□□□ -0.45
NEDD9-214ENST00000513989 MAGEB6Q8N7X4 407 aa12.24□□□□□ -0.45
NEDD9-214ENST00000513989 RUFY2Q8WXA3 655 aa12.24□□□□□ -0.45
NEDD9-214ENST00000513989 HHIPL1Q96JK4 782 aa12.24□□□□□ -0.45
NEDD9-214ENST00000513989 ZIC5Q96T25 663 aa12.24□□□□□ -0.45
NEDD9-214ENST00000513989 DIAPH3Q9NSV4 1193 aa12.24□□□□□ -0.45
NEDD9-214ENST00000513989 TSKSQ9UJT2 592 aa12.24□□□□□ -0.45
NEDD9-214ENST00000513989 GSPT1P15170 499 aaKnown RBP12.23□□□□□ -0.45
NEDD9-214ENST00000513989 CYP7A1P22680 504 aa12.23□□□□□ -0.45
NEDD9-214ENST00000513989 MECOMQ03112 1051 aa12.23□□□□□ -0.45
NEDD9-214ENST00000513989 UBE3CQ15386 1083 aa12.23□□□□□ -0.45
NEDD9-214ENST00000513989 HHIPL2Q6UWX4 724 aa12.23□□□□□ -0.45
NEDD9-214ENST00000513989 USP48Q86UV5 1035 aa12.23□□□□□ -0.45
NEDD9-214ENST00000513989 TEKT1Q969V4 418 aa12.23□□□□□ -0.45
NEDD9-214ENST00000513989 NSUN4Q96CB9 384 aaKnown RBP12.23□□□□□ -0.45
NEDD9-214ENST00000513989 EDC3Q96F86 508 aaKnown RBP12.23□□□□□ -0.45
NEDD9-214ENST00000513989 SERPINA10Q9UK55 444 aa12.23□□□□□ -0.45
NEDD9-214ENST00000513989 ECM29Q5VYK3 1845 aa12.23□□□□□ -0.45
NEDD9-214ENST00000513989 ADM5C9JUS6 153 aa12.22□□□□□ -0.45
NEDD9-214ENST00000513989 PLCG2P16885 1265 aa12.22□□□□□ -0.45
NEDD9-214ENST00000513989 PRDX5P30044 214 aa12.22□□□□□ -0.45
NEDD9-214ENST00000513989 MAP2K2P36507 400 aa12.22□□□□□ -0.45
NEDD9-214ENST00000513989 MFAP1P55081 439 aaKnown RBP12.22□□□□□ -0.45
NEDD9-214ENST00000513989 CERS5Q8N5B7 392 aa12.22□□□□□ -0.45
NEDD9-214ENST00000513989 FAM163AQ96GL9 167 aaPredicted RBP12.22□□□□□ -0.45
NEDD9-214ENST00000513989 GMLQ99445 158 aa12.22□□□□□ -0.45
NEDD9-214ENST00000513989 MXD3Q9BW11 206 aa12.22□□□□□ -0.45
NEDD9-214ENST00000513989 ZNF408Q9H9D4 720 aa12.22□□□□□ -0.45
NEDD9-214ENST00000513989 ZNF532Q9HCE3 1301 aa12.21□□□□□ -0.45
NEDD9-214ENST00000513989 MYO1BO43795 1136 aa12.21□□□□□ -0.45
NEDD9-214ENST00000513989 CDC45O75419 566 aa12.21□□□□□ -0.45
NEDD9-214ENST00000513989 PDE6AP16499 860 aa12.21□□□□□ -0.45
NEDD9-214ENST00000513989 ADD2P35612 726 aa12.21□□□□□ -0.45
NEDD9-214ENST00000513989 DLGAP5Q15398 846 aa12.21□□□□□ -0.45
NEDD9-214ENST00000513989 ABHD8Q96I13 439 aa12.21□□□□□ -0.45
NEDD9-214ENST00000513989 HELLSQ9NRZ9 838 aa12.21□□□□□ -0.45
NEDD9-214ENST00000513989 FAM155AB1AL88 458 aaPredicted RBP12.2□□□□□ -0.46
NEDD9-214ENST00000513989 CRKP46108 304 aa12.2□□□□□ -0.46
NEDD9-214ENST00000513989 ZNF280AP59817 542 aaPredicted RBP12.2□□□□□ -0.46
NEDD9-214ENST00000513989 KIF4BQ2VIQ3 1234 aa12.2□□□□□ -0.46
NEDD9-214ENST00000513989 MCMDC2Q4G0Z9 681 aa12.2□□□□□ -0.46
NEDD9-214ENST00000513989 RBM26Q5T8P6 1007 aaKnown RBP12.2□□□□□ -0.46
NEDD9-214ENST00000513989 KRT26Q7Z3Y9 468 aa12.2□□□□□ -0.46
NEDD9-214ENST00000513989 APPBP2Q92624 585 aa12.2□□□□□ -0.46
NEDD9-214ENST00000513989 PAPPA2Q9BXP8 1791 aa12.2□□□□□ -0.46
NEDD9-214ENST00000513989 PDE4DIPQ5VU43 2346 aa12.2□□□□□ -0.46
NEDD9-214ENST00000513989 RFX7Q2KHR2 1363 aa12.19□□□□□ -0.46
NEDD9-214ENST00000513989 MAGEB6P1A0A0J9YX57 407 aa12.19□□□□□ -0.46
NEDD9-214ENST00000513989 CHMLP26374 656 aa12.19□□□□□ -0.46
NEDD9-214ENST00000513989 HUNKP57058 714 aa12.19□□□□□ -0.46
NEDD9-214ENST00000513989 PPP4CP60510 307 aa12.19□□□□□ -0.46
NEDD9-214ENST00000513989 CFAP100Q494V2 611 aa12.19□□□□□ -0.46
NEDD9-214ENST00000513989 ZMYM1Q5SVZ6 1142 aa12.19□□□□□ -0.46
NEDD9-214ENST00000513989 CWC27Q6UX04 472 aaKnown RBP12.19□□□□□ -0.46
NEDD9-214ENST00000513989 KIAA1211Q6ZU35 1233 aa12.19□□□□□ -0.46
NEDD9-214ENST00000513989 MTMR14Q8NCE2 650 aa12.19□□□□□ -0.46
NEDD9-214ENST00000513989 DDRGK1Q96HY6 314 aa12.19□□□□□ -0.46
NEDD9-214ENST00000513989 ZDHHC15Q96MV8 337 aa12.19□□□□□ -0.46
NEDD9-214ENST00000513989 MYOZ2Q9NPC6 264 aa12.19□□□□□ -0.46
NEDD9-214ENST00000513989 GGA3Q9NZ52 723 aa12.19□□□□□ -0.46
NEDD9-214ENST00000513989 LAMB1P07942 1786 aa12.19□□□□□ -0.46
NEDD9-214ENST00000513989 MROH7-TTC4A0A0A0MT08 1334 aa12.18□□□□□ -0.46
NEDD9-214ENST00000513989 GPR75-ASB3A0A0A6YYF3 556 aa12.18□□□□□ -0.46
NEDD9-214ENST00000513989 TCRBV5S4A2TA0A5A2 114 aa12.18□□□□□ -0.46
NEDD9-214ENST00000513989 GNAT2P19087 354 aa12.18□□□□□ -0.46
NEDD9-214ENST00000513989 DIXDC1Q155Q3 683 aa12.18□□□□□ -0.46
NEDD9-214ENST00000513989 GRIK5Q16478 980 aa12.18□□□□□ -0.46
NEDD9-214ENST00000513989 GBA2Q9HCG7 927 aaPredicted RBP12.18□□□□□ -0.46
NEDD9-214ENST00000513989 USP40Q9NVE5 1235 aa12.18□□□□□ -0.46
NEDD9-214ENST00000513989 TMOD2Q9NZR1 351 aa12.18□□□□□ -0.46
NEDD9-214ENST00000513989 COL1A1P02452 1464 aaPredicted RBP12.17□□□□□ -0.46
NEDD9-214ENST00000513989 NMIQ13287 307 aaPredicted RBP12.17□□□□□ -0.46
NEDD9-214ENST00000513989 MIGA1Q8NAN2 632 aa12.17□□□□□ -0.46
NEDD9-214ENST00000513989 CRNKL1Q9BZJ0 848 aaKnown RBP12.17□□□□□ -0.46
NEDD9-214ENST00000513989 AATFQ9NY61 560 aaKnown RBP eCLIP12.17□□□□□ -0.46
NEDD9-214ENST00000513989 DAGLAQ9Y4D2 1042 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms