RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 RGL3Q3MIN7 710 aa9.84□□□□□ -0.83
RFC1-213ENST00000512275 COL13A1Q5TAT6 717 aaPredicted RBP9.84□□□□□ -0.83
RFC1-213ENST00000512275 USP48Q86UV5 1035 aa9.84□□□□□ -0.83
RFC1-213ENST00000512275 ZNF654Q8IZM8 581 aa9.84□□□□□ -0.83
RFC1-213ENST00000512275 ANKRD24Q8TF21 1146 aa9.84□□□□□ -0.83
RFC1-213ENST00000512275 UBXN4Q92575 508 aa9.84□□□□□ -0.83
RFC1-213ENST00000512275 ZNF837Q96EG3 531 aaPredicted RBP9.84□□□□□ -0.83
RFC1-213ENST00000512275 GMCL1Q96IK5 515 aa9.84□□□□□ -0.83
RFC1-213ENST00000512275 SLC30A3Q99726 388 aa9.84□□□□□ -0.83
RFC1-213ENST00000512275 EHD4Q9H223 541 aa9.84□□□□□ -0.83
RFC1-213ENST00000512275 ABCB6Q9NP58 842 aa9.84□□□□□ -0.83
RFC1-213ENST00000512275 GGT7Q9UJ14 662 aa9.84□□□□□ -0.83
RFC1-213ENST00000512275 PCDHGB7Q9Y5F8 929 aa9.84□□□□□ -0.83
RFC1-213ENST00000512275 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.84□□□□□ -0.83
RFC1-213ENST00000512275 MYO3AQ8NEV4 1616 aa9.84□□□□□ -0.83
RFC1-213ENST00000512275 RNF225M0QZC1 329 aaPredicted RBP9.83□□□□□ -0.84
RFC1-213ENST00000512275 ARHGEF15O94989 841 aa9.83□□□□□ -0.84
RFC1-213ENST00000512275 TNNI2P48788 182 aa9.83□□□□□ -0.84
RFC1-213ENST00000512275 ABHD17AQ96GS6 310 aa9.83□□□□□ -0.84
RFC1-213ENST00000512275 TCF12Q99081 682 aa9.83□□□□□ -0.84
RFC1-213ENST00000512275 CAPN10Q9HC96 672 aa9.83□□□□□ -0.84
RFC1-213ENST00000512275 TRPM1Q7Z4N2 1603 aa9.82□□□□□ -0.84
RFC1-213ENST00000512275 UBR1Q8IWV7 1749 aa9.82□□□□□ -0.84
RFC1-213ENST00000512275 CEBPAP49715 358 aaPredicted RBP9.82□□□□□ -0.84
RFC1-213ENST00000512275 MAP3K10Q02779 954 aa9.82□□□□□ -0.84
RFC1-213ENST00000512275 RASSF7Q02833 373 aa9.82□□□□□ -0.84
RFC1-213ENST00000512275 FAM182BQ5T319 152 aa9.82□□□□□ -0.84
RFC1-213ENST00000512275 TMEM151AQ8N4L1 468 aa9.82□□□□□ -0.84
RFC1-213ENST00000512275 GMLQ99445 158 aa9.82□□□□□ -0.84
RFC1-213ENST00000512275 NOC4LQ9BVI4 516 aaKnown RBP9.82□□□□□ -0.84
RFC1-213ENST00000512275 ATXN7L1Q9ULK2 861 aaPredicted RBP9.82□□□□□ -0.84
RFC1-213ENST00000512275 PPM1HQ9ULR3 514 aa9.82□□□□□ -0.84
RFC1-213ENST00000512275 TNRQ92752 1358 aa9.82□□□□□ -0.84
RFC1-213ENST00000512275 PSAPP07602 524 aa9.81□□□□□ -0.84
RFC1-213ENST00000512275 CD33P20138 364 aa9.81□□□□□ -0.84
RFC1-213ENST00000512275 SRSF11Q05519 484 aaKnown RBP9.81□□□□□ -0.84
RFC1-213ENST00000512275 CCNJLQ8IV13 435 aa9.81□□□□□ -0.84
RFC1-213ENST00000512275 DCAF11Q8TEB1 546 aa9.81□□□□□ -0.84
RFC1-213ENST00000512275 PNMA5Q96PV4 448 aa9.81□□□□□ -0.84
RFC1-213ENST00000512275 ZKSCAN3Q9BRR0 538 aa9.81□□□□□ -0.84
RFC1-213ENST00000512275 NEXMIFQ5QGS0 1516 aa9.81□□□□□ -0.84
RFC1-213ENST00000512275 KDM5AP29375 1690 aaKnown RBP9.8□□□□□ -0.84
RFC1-213ENST00000512275 TMEM238LA0A1B0GVL6 79 aa9.8□□□□□ -0.84
RFC1-213ENST00000512275 GDF11O95390 407 aa9.8□□□□□ -0.84
RFC1-213ENST00000512275 XRCC5P13010 732 aaKnown RBP9.8□□□□□ -0.84
RFC1-213ENST00000512275 ACPPP15309 386 aa9.8□□□□□ -0.84
RFC1-213ENST00000512275 HYAL2Q12891 473 aa9.8□□□□□ -0.84
RFC1-213ENST00000512275 IDI1Q13907 227 aa9.8□□□□□ -0.84
RFC1-213ENST00000512275 NBPF8Q3BBV2 869 aa9.8□□□□□ -0.84
RFC1-213ENST00000512275 LYPD4Q6UWN0 246 aa9.8□□□□□ -0.84
RFC1-213ENST00000512275 CEP120Q8N960 986 aa9.8□□□□□ -0.84
RFC1-213ENST00000512275 LIN7BQ9HAP6 207 aa9.8□□□□□ -0.84
RFC1-213ENST00000512275 COPRSQ9NQ92 184 aa9.8□□□□□ -0.84
RFC1-213ENST00000512275 GPR25O00155 361 aa9.79□□□□□ -0.84
RFC1-213ENST00000512275 NRLP54845 237 aa9.79□□□□□ -0.84
RFC1-213ENST00000512275 PLAURQ03405 335 aa9.79□□□□□ -0.84
RFC1-213ENST00000512275 DHX32Q7L7V1 743 aaKnown RBP9.79□□□□□ -0.84
RFC1-213ENST00000512275 RAB44Q7Z6P3 723 aaPredicted RBP9.79□□□□□ -0.84
RFC1-213ENST00000512275 BHMTQ93088 406 aa9.79□□□□□ -0.84
RFC1-213ENST00000512275 OXCT2Q9BYC2 517 aaPredicted RBP9.79□□□□□ -0.84
RFC1-213ENST00000512275 PPP4R2Q9NY27 417 aa9.79□□□□□ -0.84
RFC1-213ENST00000512275 UHRF1BP1Q6BDS2 1440 aa9.79□□□□□ -0.84
RFC1-213ENST00000512275 PRAG1Q86YV5 1406 aa9.79□□□□□ -0.84
RFC1-213ENST00000512275 MYOM2P54296 1465 aa9.79□□□□□ -0.84
RFC1-213ENST00000512275 RALGAPBQ86X10 1494 aa9.79□□□□□ -0.84
RFC1-213ENST00000512275 ZNF142P52746 1687 aaPredicted RBP9.78□□□□□ -0.84
RFC1-213ENST00000512275 FCGRTP55899 365 aa9.78□□□□□ -0.84
RFC1-213ENST00000512275 GNL2Q13823 731 aaKnown RBP9.78□□□□□ -0.84
RFC1-213ENST00000512275 NCAPG2Q86XI2 1143 aa9.78□□□□□ -0.84
RFC1-213ENST00000512275 GTPBP3Q969Y2 492 aaKnown RBP9.78□□□□□ -0.84
RFC1-213ENST00000512275 OSMRQ99650 979 aa9.78□□□□□ -0.84
RFC1-213ENST00000512275 TANGO6Q9C0B7 1094 aa9.78□□□□□ -0.84
RFC1-213ENST00000512275 DZANK1Q9NVP4 752 aa9.78□□□□□ -0.84
RFC1-213ENST00000512275 SLC52A1Q9NWF4 448 aa9.78□□□□□ -0.84
RFC1-213ENST00000512275 TTF2Q9UNY4 1162 aaKnown RBP9.78□□□□□ -0.84
RFC1-213ENST00000512275 KIAA1210Q9ULL0 1709 aa9.78□□□□□ -0.84
RFC1-213ENST00000512275 A2ML1A8K2U0 1454 aa9.78□□□□□ -0.84
RFC1-213ENST00000512275 PTPRMP28827 1452 aa9.78□□□□□ -0.84
RFC1-213ENST00000512275 CEP170BQ9Y4F5 1589 aaPredicted RBP9.77□□□□□ -0.85
RFC1-213ENST00000512275 NFKBIEO00221 500 aa9.77□□□□□ -0.85
RFC1-213ENST00000512275 FGFR3P22607 806 aa9.77□□□□□ -0.85
RFC1-213ENST00000512275 GJA8P48165 433 aa9.77□□□□□ -0.85
RFC1-213ENST00000512275 FOXR1Q6PIV2 292 aa9.77□□□□□ -0.85
RFC1-213ENST00000512275 TRPM4Q8TD43 1214 aa9.77□□□□□ -0.85
RFC1-213ENST00000512275 RSRP1Q9BUV0 290 aa9.77□□□□□ -0.85
RFC1-213ENST00000512275 BHLHE41Q9C0J9 482 aaPredicted RBP9.77□□□□□ -0.85
RFC1-213ENST00000512275 PRKAG2Q9UGJ0 569 aa9.77□□□□□ -0.85
RFC1-213ENST00000512275 INPP5FQ9Y2H2 1132 aa9.77□□□□□ -0.85
RFC1-213ENST00000512275 NLRP1Q9C000 1473 aa9.77□□□□□ -0.85
RFC1-213ENST00000512275 CELA2BP08218 269 aaPredicted RBP9.76□□□□□ -0.85
RFC1-213ENST00000512275 ITPKAP23677 461 aa9.76□□□□□ -0.85
RFC1-213ENST00000512275 GPLD1P80108 840 aa9.76□□□□□ -0.85
RFC1-213ENST00000512275 NSUN5Q96P11 429 aaKnown RBP9.76□□□□□ -0.85
RFC1-213ENST00000512275 MBIPQ9NS73 344 aa9.76□□□□□ -0.85
RFC1-213ENST00000512275 KBTBD4Q9NVX7 518 aa9.76□□□□□ -0.85
RFC1-213ENST00000512275 LAMC1P11047 1609 aa9.75□□□□□ -0.85
RFC1-213ENST00000512275 IQGAP1P46940 1657 aa9.75□□□□□ -0.85
RFC1-213ENST00000512275 TMEM102Q8N9M5 508 aaPredicted RBP9.75□□□□□ -0.85
RFC1-213ENST00000512275 PPP1R1BQ9UD71 204 aaPredicted RBP9.75□□□□□ -0.85
RFC1-213ENST00000512275 PHF24Q9UPV7 400 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms