RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 DENND2AQ9ULE3 1009 aa18.88■□□□□ 0.61
SQSTM1-213ENST00000510187 DUOX1Q9NRD9 1551 aa18.88■□□□□ 0.61
SQSTM1-213ENST00000510187 WASHC4Q2M389 1173 aa18.88■□□□□ 0.61
SQSTM1-213ENST00000510187 GRIPAP1Q4V328 841 aa18.88■□□□□ 0.61
SQSTM1-213ENST00000510187 NLGN2Q8NFZ4 835 aa18.88■□□□□ 0.61
SQSTM1-213ENST00000510187 EYA3Q99504 573 aa18.88■□□□□ 0.61
SQSTM1-213ENST00000510187 AKAP11Q9UKA4 1901 aa18.87■□□□□ 0.61
SQSTM1-213ENST00000510187 PTMAP06454 111 aaKnown RBP18.87■□□□□ 0.61
SQSTM1-213ENST00000510187 RTKN2Q8IZC4 609 aa18.87■□□□□ 0.61
SQSTM1-213ENST00000510187 RTFDC1Q9BY42 306 aaPredicted RBP18.87■□□□□ 0.61
SQSTM1-213ENST00000510187 MCMDC2Q4G0Z9 681 aa18.86■□□□□ 0.61
SQSTM1-213ENST00000510187 SOGA3Q5TF21 947 aa18.86■□□□□ 0.61
SQSTM1-213ENST00000510187 SCAND2PQ9GZW5 306 aaPredicted RBP18.86■□□□□ 0.61
SQSTM1-213ENST00000510187 CD209Q9NNX6 404 aa18.86■□□□□ 0.61
SQSTM1-213ENST00000510187 SNED1Q8TER0 1413 aa18.86■□□□□ 0.61
SQSTM1-213ENST00000510187 RRP9O43818 475 aaKnown RBP18.86■□□□□ 0.61
SQSTM1-213ENST00000510187 TDRD7Q8NHU6 1098 aaKnown RBP18.86■□□□□ 0.61
SQSTM1-213ENST00000510187 NEK1Q96PY6 1258 aa18.86■□□□□ 0.61
SQSTM1-213ENST00000510187 FHDC1Q9C0D6 1143 aaPredicted RBP18.86■□□□□ 0.61
SQSTM1-213ENST00000510187 PIH1D3Q9NQM4 214 aaKnown RBP18.86■□□□□ 0.61
SQSTM1-213ENST00000510187 COL1A1P02452 1464 aaPredicted RBP18.85■□□□□ 0.61
SQSTM1-213ENST00000510187 CHAF1AQ13111 956 aaPredicted RBP18.85■□□□□ 0.61
SQSTM1-213ENST00000510187 LRRFIP1Q32MZ4 808 aaKnown RBP18.85■□□□□ 0.61
SQSTM1-213ENST00000510187 CDC37L1Q7L3B6 337 aa18.85■□□□□ 0.61
SQSTM1-213ENST00000510187 SUPT20HQ8NEM7 779 aa18.85■□□□□ 0.61
SQSTM1-213ENST00000510187 GTF3C6Q969F1 213 aa18.85■□□□□ 0.61
SQSTM1-213ENST00000510187 BCS1LQ9Y276 419 aa18.85■□□□□ 0.61
SQSTM1-213ENST00000510187 PDS5AQ29RF7 1337 aaKnown RBP18.84■□□□□ 0.61
SQSTM1-213ENST00000510187 SOCS7O14512 581 aa18.84■□□□□ 0.61
SQSTM1-213ENST00000510187 ZBTB22O15209 634 aa18.84■□□□□ 0.61
SQSTM1-213ENST00000510187 IDH1O75874 414 aaKnown RBP18.84■□□□□ 0.61
SQSTM1-213ENST00000510187 HMGB1P09429 215 aaKnown RBP18.84■□□□□ 0.61
SQSTM1-213ENST00000510187 IL1R1P14778 569 aa18.84■□□□□ 0.61
SQSTM1-213ENST00000510187 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.84■□□□□ 0.61
SQSTM1-213ENST00000510187 COA1Q9GZY4 146 aa18.84■□□□□ 0.61
SQSTM1-213ENST00000510187 G3V3G9 751 aa18.83■□□□□ 0.61
SQSTM1-213ENST00000510187 CHGBP05060 677 aa18.83■□□□□ 0.61
SQSTM1-213ENST00000510187 KIAA2012Q0VF49 1180 aa18.83■□□□□ 0.61
SQSTM1-213ENST00000510187 DCAF8Q5TAQ9 597 aa18.83■□□□□ 0.61
SQSTM1-213ENST00000510187 HELLSQ9NRZ9 838 aa18.83■□□□□ 0.61
SQSTM1-213ENST00000510187 ABCF2Q9UG63 623 aa18.83■□□□□ 0.61
SQSTM1-213ENST00000510187 JAG2Q9Y219 1238 aa18.83■□□□□ 0.61
SQSTM1-213ENST00000510187 TAF6LQ9Y6J9 622 aa18.83■□□□□ 0.61
SQSTM1-213ENST00000510187 BRCA1P38398 1863 aaKnown RBP18.83■□□□□ 0.6
SQSTM1-213ENST00000510187 RNF113AO15541 343 aaKnown RBP18.83■□□□□ 0.6
SQSTM1-213ENST00000510187 KDM4AO75164 1064 aa18.83■□□□□ 0.6
SQSTM1-213ENST00000510187 CCDC192P0DO97 292 aa18.83■□□□□ 0.6
SQSTM1-213ENST00000510187 DOK7Q18PE1 504 aa18.83■□□□□ 0.6
SQSTM1-213ENST00000510187 TTC6Q86TZ1 520 aa18.83■□□□□ 0.6
SQSTM1-213ENST00000510187 PSMD1Q99460 953 aa18.83■□□□□ 0.6
SQSTM1-213ENST00000510187 LRP2BPQ9P2M1 347 aa18.83■□□□□ 0.6
SQSTM1-213ENST00000510187 USP25Q9UHP3 1055 aa18.83■□□□□ 0.6
SQSTM1-213ENST00000510187 ZFYP08048 801 aaPredicted RBP18.82■□□□□ 0.6
SQSTM1-213ENST00000510187 MAP3K12Q12852 859 aa18.82■□□□□ 0.6
SQSTM1-213ENST00000510187 ZSCAN25Q6NSZ9 544 aa18.82■□□□□ 0.6
SQSTM1-213ENST00000510187 LLPHQ9BRT6 129 aaKnown RBP18.82■□□□□ 0.6
SQSTM1-213ENST00000510187 DSCC1Q9BVC3 393 aa18.82■□□□□ 0.6
SQSTM1-213ENST00000510187 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.82■□□□□ 0.68e-8■■■■□ 19.4
SQSTM1-213ENST00000510187 ADCY5O95622 1261 aa18.81■□□□□ 0.6
SQSTM1-213ENST00000510187 COL9A3Q14050 684 aaPredicted RBP18.81■□□□□ 0.6
SQSTM1-213ENST00000510187 AOC3Q16853 763 aa18.81■□□□□ 0.6
SQSTM1-213ENST00000510187 SLFNL1Q499Z3 407 aa18.81■□□□□ 0.6
SQSTM1-213ENST00000510187 SLC9C2Q5TAH2 1124 aa18.81■□□□□ 0.6
SQSTM1-213ENST00000510187 GIMAP6Q6P9H5 292 aa18.81■□□□□ 0.6
SQSTM1-213ENST00000510187 PPIP5K2O43314 1243 aa18.8■□□□□ 0.6
SQSTM1-213ENST00000510187 WDR66Q8TBY9 1149 aa18.8■□□□□ 0.6
SQSTM1-213ENST00000510187 TCEANC2Q96MN5 208 aa18.8■□□□□ 0.6
SQSTM1-213ENST00000510187 NUP62CLQ9H1M0 184 aa18.8■□□□□ 0.6
SQSTM1-213ENST00000510187 DBNDD1Q9H9R9 158 aa18.8■□□□□ 0.6
SQSTM1-213ENST00000510187 DDX19AQ9NUU7 478 aaKnown RBP18.8■□□□□ 0.6
SQSTM1-213ENST00000510187 TPM3P06753 285 aa18.8■□□□□ 0.6
SQSTM1-213ENST00000510187 CYP21A2P08686 494 aa18.8■□□□□ 0.6
SQSTM1-213ENST00000510187 MAP3K11Q16584 847 aa18.8■□□□□ 0.6
SQSTM1-213ENST00000510187 SYT17Q9BSW7 474 aa18.8■□□□□ 0.6
SQSTM1-213ENST00000510187 RAI14Q9P0K7 980 aa18.8■□□□□ 0.6
SQSTM1-213ENST00000510187 MYH13Q9UKX3 1938 aa18.79■□□□□ 0.6
SQSTM1-213ENST00000510187 PDE6AP16499 860 aa18.79■□□□□ 0.6
SQSTM1-213ENST00000510187 ADD2P35612 726 aa18.79■□□□□ 0.6
SQSTM1-213ENST00000510187 ZMYM1Q5SVZ6 1142 aa18.79■□□□□ 0.6
SQSTM1-213ENST00000510187 Q6ZUG5 572 aa18.79■□□□□ 0.6
SQSTM1-213ENST00000510187 PODNQ7Z5L7 613 aa18.79■□□□□ 0.6
SQSTM1-213ENST00000510187 CHMP4CQ96CF2 233 aa18.79■□□□□ 0.6
SQSTM1-213ENST00000510187 SEC62Q99442 399 aaKnown RBP18.79■□□□□ 0.6
SQSTM1-213ENST00000510187 ZSCAN16Q9H4T2 348 aaPredicted RBP18.79■□□□□ 0.6
SQSTM1-213ENST00000510187 ZNF277Q9NRM2 450 aaPredicted RBP18.79■□□□□ 0.6
SQSTM1-213ENST00000510187 MAGEB6Q8N7X4 407 aa18.78■□□□□ 0.6
SQSTM1-213ENST00000510187 SMARCC2Q8TAQ2 1214 aa18.78■□□□□ 0.6
SQSTM1-213ENST00000510187 SPATA32Q96LK8 384 aa18.78■□□□□ 0.6
SQSTM1-213ENST00000510187 ZNF532Q9HCE3 1301 aa18.78■□□□□ 0.6
SQSTM1-213ENST00000510187 SALL1Q9NSC2 1324 aa18.78■□□□□ 0.6
SQSTM1-213ENST00000510187 SRCAPQ6ZRS2 3230 aa18.77■□□□□ 0.6
SQSTM1-213ENST00000510187 ECE2O60344 883 aa18.77■□□□□ 0.6
SQSTM1-213ENST00000510187 PFKFB2O60825 505 aa18.77■□□□□ 0.6
SQSTM1-213ENST00000510187 GTF2IP78347 998 aa18.77■□□□□ 0.6
SQSTM1-213ENST00000510187 RESTQ13127 1097 aa18.77■□□□□ 0.6
SQSTM1-213ENST00000510187 UBE3CQ15386 1083 aa18.77■□□□□ 0.6
SQSTM1-213ENST00000510187 CCDC129Q6ZRS4 1044 aa18.77■□□□□ 0.6
SQSTM1-213ENST00000510187 RBM43Q6ZSC3 357 aaKnown RBP18.77■□□□□ 0.6
SQSTM1-213ENST00000510187 FERMT3Q86UX7 667 aa18.77■□□□□ 0.6
SQSTM1-213ENST00000510187 LEO1Q8WVC0 666 aaPredicted RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms