RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 MYH13Q9UKX3 1938 aa22.58■■□□□ 1.21
CLDND1-217ENST00000508071 IFIT1P09914 478 aaKnown RBP22.57■■□□□ 1.2
CLDND1-217ENST00000508071 PUM3Q15397 648 aaKnown RBP22.57■■□□□ 1.2
CLDND1-217ENST00000508071 MIGA2Q7L4E1 593 aa22.57■■□□□ 1.2
CLDND1-217ENST00000508071 TRIOBPQ9H2D6 2365 aa22.57■■□□□ 1.2
CLDND1-217ENST00000508071 KIF16BQ96L93 1317 aa22.57■■□□□ 1.2
CLDND1-217ENST00000508071 ANP32CO43423 234 aa22.56■■□□□ 1.2
CLDND1-217ENST00000508071 ECM2O94769 699 aaPredicted RBP22.56■■□□□ 1.2
CLDND1-217ENST00000508071 KLHDC4Q8TBB5 520 aa22.56■■□□□ 1.2
CLDND1-217ENST00000508071 C17orf99Q6UX52 265 aa22.55■■□□□ 1.2
CLDND1-217ENST00000508071 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.55■■□□□ 1.2
CLDND1-217ENST00000508071 CPA4Q9UI42 421 aa22.55■■□□□ 1.2
CLDND1-217ENST00000508071 H0YGN5 161 aa22.54■■□□□ 1.2
CLDND1-217ENST00000508071 HOXD10P28358 340 aa22.54■■□□□ 1.2
CLDND1-217ENST00000508071 INPP5BP32019 993 aa22.54■■□□□ 1.2
CLDND1-217ENST00000508071 PSMC4P43686 418 aa22.54■■□□□ 1.2
CLDND1-217ENST00000508071 ANKRD23Q86SG2 305 aa22.54■■□□□ 1.2
CLDND1-217ENST00000508071 WDR66Q8TBY9 1149 aa22.54■■□□□ 1.2
CLDND1-217ENST00000508071 FAM151AQ8WW52 585 aa22.54■■□□□ 1.2
CLDND1-217ENST00000508071 PDHXO00330 501 aa22.53■■□□□ 1.2
CLDND1-217ENST00000508071 FGFR2P21802 821 aa22.53■■□□□ 1.2
CLDND1-217ENST00000508071 ZEB1P37275 1124 aaPredicted RBP22.53■■□□□ 1.2
CLDND1-217ENST00000508071 SRRDQ9UH36 339 aa22.53■■□□□ 1.2
CLDND1-217ENST00000508071 SLC5A1P13866 664 aa22.52■■□□□ 1.2
CLDND1-217ENST00000508071 RAET1EQ8TD07 263 aa22.52■■□□□ 1.2
CLDND1-217ENST00000508071 KCNH4Q9UQ05 1017 aa22.52■■□□□ 1.2
CLDND1-217ENST00000508071 FMNL1O95466 1100 aaPredicted RBP22.51■■□□□ 1.19
CLDND1-217ENST00000508071 TCP10Q12799 353 aa22.51■■□□□ 1.19
CLDND1-217ENST00000508071 MRPL50Q8N5N7 158 aaKnown RBP22.51■■□□□ 1.19
CLDND1-217ENST00000508071 LPIN2Q92539 896 aa22.51■■□□□ 1.19
CLDND1-217ENST00000508071 TRIM47Q96LD4 638 aa22.51■■□□□ 1.19
CLDND1-217ENST00000508071 ZNF112Q9UJU3 913 aa22.51■■□□□ 1.19
CLDND1-217ENST00000508071 PTPRCP08575 1304 aa22.51■■□□□ 1.19
CLDND1-217ENST00000508071 OSBPP22059 807 aa22.5■■□□□ 1.19
CLDND1-217ENST00000508071 CTGFP29279 349 aa22.5■■□□□ 1.19
CLDND1-217ENST00000508071 MTFR1Q15390 333 aa22.5■■□□□ 1.19
CLDND1-217ENST00000508071 FAM9BQ8IZU0 186 aa22.5■■□□□ 1.19
CLDND1-217ENST00000508071 NKX2-3Q8TAU0 364 aa22.5■■□□□ 1.19
CLDND1-217ENST00000508071 DAGLAQ9Y4D2 1042 aa22.5■■□□□ 1.19
CLDND1-217ENST00000508071 EYA2O00167 538 aa22.49■■□□□ 1.19
CLDND1-217ENST00000508071 GRK4P32298 578 aa22.49■■□□□ 1.19
CLDND1-217ENST00000508071 CDC42EP5Q6NZY7 148 aa22.49■■□□□ 1.19
CLDND1-217ENST00000508071 DPF3Q92784 378 aa22.49■■□□□ 1.19
CLDND1-217ENST00000508071 USP44Q9H0E7 712 aa22.49■■□□□ 1.19
CLDND1-217ENST00000508071 MYPNQ86TC9 1320 aa22.49■■□□□ 1.19
CLDND1-217ENST00000508071 ADGRA2Q96PE1 1338 aa22.49■■□□□ 1.19
CLDND1-217ENST00000508071 DIXDC1Q155Q3 683 aa22.48■■□□□ 1.19
CLDND1-217ENST00000508071 NOL9Q5SY16 702 aaKnown RBP22.48■■□□□ 1.19
CLDND1-217ENST00000508071 SHISA4Q96DD7 197 aa22.48■■□□□ 1.19
CLDND1-217ENST00000508071 PARK7Q99497 189 aaKnown RBP22.48■■□□□ 1.19
CLDND1-217ENST00000508071 NFIAQ12857 509 aa22.47■■□□□ 1.19
CLDND1-217ENST00000508071 CHRDL2Q6WN34 429 aa22.47■■□□□ 1.19
CLDND1-217ENST00000508071 BIN2Q9UBW5 565 aaPredicted RBP22.47■■□□□ 1.19
CLDND1-217ENST00000508071 LDHBP07195 334 aaKnown RBP22.46■■□□□ 1.19
CLDND1-217ENST00000508071 MOGSQ13724 837 aa22.46■■□□□ 1.19
CLDND1-217ENST00000508071 USP40Q9NVE5 1235 aa22.46■■□□□ 1.19
CLDND1-217ENST00000508071 GNL3LQ9NVN8 582 aaKnown RBP22.46■■□□□ 1.19
CLDND1-217ENST00000508071 MGAMO43451 1857 aa22.45■■□□□ 1.19
CLDND1-217ENST00000508071 CXCL11O14625 94 aa22.45■■□□□ 1.18
CLDND1-217ENST00000508071 CCL5P13501 91 aa22.45■■□□□ 1.18
CLDND1-217ENST00000508071 PRDX5P30044 214 aa22.45■■□□□ 1.18
CLDND1-217ENST00000508071 GJA8P48165 433 aa22.45■■□□□ 1.18
CLDND1-217ENST00000508071 RFX5P48382 616 aaPredicted RBP22.45■■□□□ 1.18
CLDND1-217ENST00000508071 FCGRTP55899 365 aa22.45■■□□□ 1.18
CLDND1-217ENST00000508071 UBXN2AP68543 259 aa22.45■■□□□ 1.18
CLDND1-217ENST00000508071 RNF208Q9H0X6 261 aa22.45■■□□□ 1.18
CLDND1-217ENST00000508071 FAM198AQ9UFP1 575 aa22.45■■□□□ 1.18
CLDND1-217ENST00000508071 SZT2Q5T011 3432 aa22.45■■□□□ 1.18
CLDND1-217ENST00000508071 GJB1P08034 283 aa22.44■■□□□ 1.18
CLDND1-217ENST00000508071 RANBP2P49792 3224 aaKnown RBP22.44■■□□□ 1.18
CLDND1-217ENST00000508071 HTATIP2Q9BUP3 242 aa22.44■■□□□ 1.18
CLDND1-217ENST00000508071 DOCK2Q92608 1830 aa22.43■■□□□ 1.18
CLDND1-217ENST00000508071 ZNF521Q96K83 1311 aa22.43■■□□□ 1.18
CLDND1-217ENST00000508071 CYP2C8P10632 490 aa22.43■■□□□ 1.18
CLDND1-217ENST00000508071 BCRP11274 1271 aa22.43■■□□□ 1.18
CLDND1-217ENST00000508071 PRKCZQ05513 592 aa22.43■■□□□ 1.18
CLDND1-217ENST00000508071 GPAT2Q6NUI2 795 aa22.43■■□□□ 1.18
CLDND1-217ENST00000508071 ATG9AQ7Z3C6 839 aa22.43■■□□□ 1.18
CLDND1-217ENST00000508071 SSH1Q8WYL5 1049 aa22.43■■□□□ 1.18
CLDND1-217ENST00000508071 MYH2Q9UKX2 1941 aa22.42■■□□□ 1.18
CLDND1-217ENST00000508071 ATP2B3Q16720 1220 aa22.42■■□□□ 1.18
CLDND1-217ENST00000508071 FASTKD5Q7L8L6 764 aaKnown RBP22.42■■□□□ 1.18
CLDND1-217ENST00000508071 ZFPM1Q8IX07 1006 aa22.42■■□□□ 1.18
CLDND1-217ENST00000508071 SLAIN1Q8ND83 568 aa22.42■■□□□ 1.18
CLDND1-217ENST00000508071 SIL1Q9H173 461 aa22.42■■□□□ 1.18
CLDND1-217ENST00000508071 PICK1Q9NRD5 415 aa22.42■■□□□ 1.18
CLDND1-217ENST00000508071 CEP126Q9P2H0 1117 aa22.42■■□□□ 1.18
CLDND1-217ENST00000508071 SALL1Q9NSC2 1324 aa22.41■■□□□ 1.18
CLDND1-217ENST00000508071 SCYL3Q8IZE3 742 aa22.41■■□□□ 1.18
CLDND1-217ENST00000508071 RBM27Q9P2N5 1060 aaKnown RBP22.41■■□□□ 1.18
CLDND1-217ENST00000508071 FBXO3Q9UK99 471 aa22.41■■□□□ 1.18
CLDND1-217ENST00000508071 DENND2AQ9ULE3 1009 aa22.41■■□□□ 1.18
CLDND1-217ENST00000508071 ZHX2Q9Y6X8 837 aa22.41■■□□□ 1.18
CLDND1-217ENST00000508071 PHF20L1A8MW92 1017 aa22.4■■□□□ 1.18
CLDND1-217ENST00000508071 SEMA3EO15041 775 aa22.4■■□□□ 1.18
CLDND1-217ENST00000508071 CIAO1O76071 339 aa22.4■■□□□ 1.18
CLDND1-217ENST00000508071 UBE2Q1Q7Z7E8 422 aa22.4■■□□□ 1.18
CLDND1-217ENST00000508071 A0A0G2JLL6 359 aaPredicted RBP22.39■■□□□ 1.17
CLDND1-217ENST00000508071 RGS3P49796 1198 aa22.39■■□□□ 1.17
CLDND1-217ENST00000508071 GADL1Q6ZQY3 521 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms