RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 CDC27P30260 824 aa11.04□□□□□ -0.64
PHF3-208ENST00000506783 MATR3P43243 847 aaKnown RBP eCLIP11.04□□□□□ -0.647e-7■■□□□ 14.2
PHF3-208ENST00000506783 MFSD6Q6ZSS7 791 aa11.04□□□□□ -0.64
PHF3-208ENST00000506783 TRIM22Q8IYM9 498 aa11.04□□□□□ -0.64
PHF3-208ENST00000506783 ZBTB1Q9Y2K1 713 aa11.04□□□□□ -0.64
PHF3-208ENST00000506783 PCDHA5Q9Y5H7 936 aa11.04□□□□□ -0.64
PHF3-208ENST00000506783 DLG5Q8TDM6 1919 aa11.04□□□□□ -0.64
PHF3-208ENST00000506783 PXDNQ92626 1479 aa11.04□□□□□ -0.64
PHF3-208ENST00000506783 VWA3AA6NCI4 1184 aa11.04□□□□□ -0.64
PHF3-208ENST00000506783 IBSPP21815 317 aaPredicted RBP11.04□□□□□ -0.64
PHF3-208ENST00000506783 MCAMP43121 646 aa11.04□□□□□ -0.64
PHF3-208ENST00000506783 CYB5R4Q7L1T6 521 aa11.04□□□□□ -0.64
PHF3-208ENST00000506783 ATG9AQ7Z3C6 839 aa11.04□□□□□ -0.64
PHF3-208ENST00000506783 CCDC12Q8WUD4 166 aaPredicted RBP11.04□□□□□ -0.64
PHF3-208ENST00000506783 CPVLQ9H3G5 476 aa11.04□□□□□ -0.64
PHF3-208ENST00000506783 CARMIL3Q8ND23 1372 aa11.03□□□□□ -0.64
PHF3-208ENST00000506783 PFKFB2O60825 505 aa11.03□□□□□ -0.64
PHF3-208ENST00000506783 TPM3P06753 285 aa11.03□□□□□ -0.64
PHF3-208ENST00000506783 HMGB1P09429 215 aaKnown RBP11.03□□□□□ -0.64
PHF3-208ENST00000506783 SSRP1Q08945 709 aaKnown RBP11.03□□□□□ -0.64
PHF3-208ENST00000506783 CCDC102BQ68D86 513 aa11.03□□□□□ -0.64
PHF3-208ENST00000506783 DIS3L2Q8IYB7 885 aaKnown RBP11.03□□□□□ -0.64
PHF3-208ENST00000506783 FUCA2Q9BTY2 467 aa11.03□□□□□ -0.64
PHF3-208ENST00000506783 VPS16Q9H269 839 aa11.03□□□□□ -0.64
PHF3-208ENST00000506783 V9GY48 417 aaPredicted RBP11.03□□□□□ -0.64
PHF3-208ENST00000506783 WWC2Q6AWC2 1192 aa11.03□□□□□ -0.64
PHF3-208ENST00000506783 TBC1D10CQ8IV04 446 aa11.03□□□□□ -0.64
PHF3-208ENST00000506783 PIH1D3Q9NQM4 214 aaKnown RBP11.03□□□□□ -0.64
PHF3-208ENST00000506783 SERTAD1Q9UHV2 236 aa11.03□□□□□ -0.64
PHF3-208ENST00000506783 MCM7P33993 719 aa11.02□□□□□ -0.64
PHF3-208ENST00000506783 NAP1L1P55209 391 aaKnown RBP11.02□□□□□ -0.64
PHF3-208ENST00000506783 PTPROQ16827 1216 aa11.02□□□□□ -0.64
PHF3-208ENST00000506783 RASGRP4Q8TDF6 673 aa11.02□□□□□ -0.64
PHF3-208ENST00000506783 NFE2L3Q9Y4A8 694 aa11.02□□□□□ -0.64
PHF3-208ENST00000506783 SSBP05455 408 aaKnown RBP eCLIP11.02□□□□□ -0.65
PHF3-208ENST00000506783 LRRFIP1Q32MZ4 808 aaKnown RBP11.02□□□□□ -0.65
PHF3-208ENST00000506783 MTERF4Q7Z6M4 381 aaKnown RBP11.02□□□□□ -0.65
PHF3-208ENST00000506783 DZIP3Q86Y13 1208 aaKnown RBP11.02□□□□□ -0.65
PHF3-208ENST00000506783 FBXO18Q8NFZ0 1043 aa11.02□□□□□ -0.65
PHF3-208ENST00000506783 SAMSN1Q9NSI8 373 aaKnown RBP11.02□□□□□ -0.65
PHF3-208ENST00000506783 STX8Q9UNK0 236 aa11.02□□□□□ -0.65
PHF3-208ENST00000506783 FBXO38Q6PIJ6 1188 aa11.02□□□□□ -0.65
PHF3-208ENST00000506783 OXER1Q8TDS5 423 aa11.02□□□□□ -0.65
PHF3-208ENST00000506783 ZHX3Q9H4I2 956 aa11.02□□□□□ -0.65
PHF3-208ENST00000506783 KCNH3Q9ULD8 1083 aa11.02□□□□□ -0.65
PHF3-208ENST00000506783 NIP7Q9Y221 180 aaKnown RBP eCLIP11.02□□□□□ -0.65
PHF3-208ENST00000506783 AKAP2Q9Y2D5 859 aa11.02□□□□□ -0.65
PHF3-208ENST00000506783 USP31Q70CQ4 1352 aa11.02□□□□□ -0.65
PHF3-208ENST00000506783 NMT2O60551 498 aa11.01□□□□□ -0.65
PHF3-208ENST00000506783 FOXO4P98177 505 aa11.01□□□□□ -0.65
PHF3-208ENST00000506783 SF3A3Q12874 501 aaKnown RBP eCLIP11.01□□□□□ -0.65
PHF3-208ENST00000506783 MTF1Q14872 753 aa11.01□□□□□ -0.65
PHF3-208ENST00000506783 KIF4BQ2VIQ3 1234 aa11.01□□□□□ -0.65
PHF3-208ENST00000506783 LINC00301Q8NCQ3 95 aa11.01□□□□□ -0.65
PHF3-208ENST00000506783 CAPZA3Q96KX2 299 aa11.01□□□□□ -0.65
PHF3-208ENST00000506783 ZNF219Q9P2Y4 722 aaPredicted RBP11.01□□□□□ -0.65
PHF3-208ENST00000506783 SSH2Q76I76 1423 aa11.01□□□□□ -0.65
PHF3-208ENST00000506783 SMTNL1A8MU46 457 aa11.01□□□□□ -0.65
PHF3-208ENST00000506783 MARCH6O60337 910 aa11.01□□□□□ -0.65
PHF3-208ENST00000506783 ZPR1O75312 459 aa11.01□□□□□ -0.65
PHF3-208ENST00000506783 HOXB7P09629 217 aa11.01□□□□□ -0.65
PHF3-208ENST00000506783 USP5P45974 858 aa11.01□□□□□ -0.65
PHF3-208ENST00000506783 WTAPQ15007 396 aa11.01□□□□□ -0.65
PHF3-208ENST00000506783 SART3Q15020 963 aaKnown RBP11.01□□□□□ -0.65
PHF3-208ENST00000506783 ZMYM1Q5SVZ6 1142 aa11.01□□□□□ -0.65
PHF3-208ENST00000506783 GPR101Q96P66 508 aaPredicted RBP11.01□□□□□ -0.65
PHF3-208ENST00000506783 ZSWIM5Q9P217 1185 aa11.01□□□□□ -0.65
PHF3-208ENST00000506783 ANGEL1Q9UNK9 670 aaKnown RBP11.01□□□□□ -0.65
PHF3-208ENST00000506783 TFR2Q9UP52 801 aa11.01□□□□□ -0.65
PHF3-208ENST00000506783 NRKQ7Z2Y5 1582 aa11.01□□□□□ -0.65
PHF3-208ENST00000506783 F8W031 263 aaPredicted RBP11.01□□□□□ -0.65
PHF3-208ENST00000506783 ZMYND10O75800 440 aa11.01□□□□□ -0.65
PHF3-208ENST00000506783 EPSTI1Q96J88 318 aa11.01□□□□□ -0.65
PHF3-208ENST00000506783 SLU7O95391 586 aaKnown RBP11□□□□□ -0.65
PHF3-208ENST00000506783 HSPA1LP34931 641 aa11□□□□□ -0.65
PHF3-208ENST00000506783 RFX5P48382 616 aaPredicted RBP11□□□□□ -0.65
PHF3-208ENST00000506783 EIF6P56537 245 aaKnown RBP11□□□□□ -0.65
PHF3-208ENST00000506783 EVX2Q03828 476 aa11□□□□□ -0.65
PHF3-208ENST00000506783 MAP3K12Q12852 859 aa11□□□□□ -0.65
PHF3-208ENST00000506783 PPFIBP1Q86W92 1011 aa11□□□□□ -0.65
PHF3-208ENST00000506783 DHX40Q8IX18 779 aaKnown RBP11□□□□□ -0.65
PHF3-208ENST00000506783 NEK11Q8NG66 645 aa11□□□□□ -0.65
PHF3-208ENST00000506783 NOC3LQ8WTT2 800 aaKnown RBP11□□□□□ -0.65
PHF3-208ENST00000506783 DYNLL1P63167 89 aaKnown RBP11□□□□□ -0.65
PHF3-208ENST00000506783 KMT5BQ4FZB7 885 aa11□□□□□ -0.65
PHF3-208ENST00000506783 TMEM87AQ8NBN3 555 aa11□□□□□ -0.65
PHF3-208ENST00000506783 KCNG4Q8TDN1 519 aa11□□□□□ -0.65
PHF3-208ENST00000506783 PCDHB6Q9Y5E3 794 aa11□□□□□ -0.65
PHF3-208ENST00000506783 PRR29P0C7W0 189 aa11□□□□□ -0.65
PHF3-208ENST00000506783 TNNT3P45378 269 aaPredicted RBP11□□□□□ -0.65
PHF3-208ENST00000506783 IQCB1Q15051 598 aa11□□□□□ -0.65
PHF3-208ENST00000506783 RTN1Q16799 776 aa11□□□□□ -0.65
PHF3-208ENST00000506783 JMYQ8N9B5 988 aa11□□□□□ -0.65
PHF3-208ENST00000506783 APPBP2Q92624 585 aa11□□□□□ -0.65
PHF3-208ENST00000506783 CCDC102AQ96A19 550 aa11□□□□□ -0.65
PHF3-208ENST00000506783 RCOR1Q9UKL0 485 aa11□□□□□ -0.65
PHF3-208ENST00000506783 PDE6AP16499 860 aa10.99□□□□□ -0.65
PHF3-208ENST00000506783 NOM1Q5C9Z4 860 aaKnown RBP10.99□□□□□ -0.65
PHF3-208ENST00000506783 TMCO3Q6UWJ1 677 aa10.99□□□□□ -0.65
PHF3-208ENST00000506783 TDRD7Q8NHU6 1098 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms