RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 GAKO14976 1311 aa11.22□□□□□ -0.61
PDLIM5-209ENST00000506632 CAPN15O75808 1086 aa11.22□□□□□ -0.61
PDLIM5-209ENST00000506632 GJA5P36382 358 aa11.22□□□□□ -0.61
PDLIM5-209ENST00000506632 SREBF2Q12772 1141 aa11.22□□□□□ -0.61
PDLIM5-209ENST00000506632 MKRN3Q13064 507 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-209ENST00000506632 G3BP1Q13283 466 aaKnown RBP eCLIP11.22□□□□□ -0.618e-6■□□□□ 9
PDLIM5-209ENST00000506632 MVPQ14764 893 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-209ENST00000506632 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-209ENST00000506632 ANKRD13AQ8IZ07 590 aa11.22□□□□□ -0.61
PDLIM5-209ENST00000506632 ZGPATQ8N5A5 531 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-209ENST00000506632 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.22□□□□□ -0.61
PDLIM5-209ENST00000506632 GPR108Q9NPR9 543 aa11.22□□□□□ -0.61
PDLIM5-209ENST00000506632 TMOD2Q9NZR1 351 aa11.22□□□□□ -0.61
PDLIM5-209ENST00000506632 NOP58Q9Y2X3 529 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-209ENST00000506632 RFX7Q2KHR2 1363 aa11.21□□□□□ -0.61
PDLIM5-209ENST00000506632 MANSC4A6NHS7 340 aaPredicted RBP11.21□□□□□ -0.61
PDLIM5-209ENST00000506632 ARID4AP29374 1257 aaPredicted RBP11.21□□□□□ -0.61
PDLIM5-209ENST00000506632 NOM1Q5C9Z4 860 aaKnown RBP11.21□□□□□ -0.61
PDLIM5-209ENST00000506632 CDC42EP5Q6NZY7 148 aa11.21□□□□□ -0.61
PDLIM5-209ENST00000506632 FAM163AQ96GL9 167 aaPredicted RBP11.21□□□□□ -0.61
PDLIM5-209ENST00000506632 MCOLN1Q9GZU1 580 aa11.21□□□□□ -0.61
PDLIM5-209ENST00000506632 C1orf115Q9H7X2 142 aa11.21□□□□□ -0.61
PDLIM5-209ENST00000506632 MYH2Q9UKX2 1941 aa11.21□□□□□ -0.62
PDLIM5-209ENST00000506632 INHBEP58166 350 aa11.2□□□□□ -0.62
PDLIM5-209ENST00000506632 NFIAQ12857 509 aa11.2□□□□□ -0.62
PDLIM5-209ENST00000506632 PANK1Q8TE04 598 aa11.2□□□□□ -0.62
PDLIM5-209ENST00000506632 ZNF384Q8TF68 577 aa11.2□□□□□ -0.62
PDLIM5-209ENST00000506632 FAM151AQ8WW52 585 aa11.2□□□□□ -0.62
PDLIM5-209ENST00000506632 NEUROD6Q96NK8 337 aa11.2□□□□□ -0.62
PDLIM5-209ENST00000506632 HMG20BQ9P0W2 317 aa11.2□□□□□ -0.62
PDLIM5-209ENST00000506632 FAM198AQ9UFP1 575 aa11.2□□□□□ -0.62
PDLIM5-209ENST00000506632 TESPA1A2RU30 521 aaPredicted RBP11.19□□□□□ -0.62
PDLIM5-209ENST00000506632 IGF2BP3O00425 579 aaKnown RBP eCLIP11.19□□□□□ -0.62
PDLIM5-209ENST00000506632 TBC1D8O95759 1140 aa11.19□□□□□ -0.62
PDLIM5-209ENST00000506632 ALDH1A1P00352 501 aa11.19□□□□□ -0.62
PDLIM5-209ENST00000506632 MCAMP43121 646 aa11.19□□□□□ -0.62
PDLIM5-209ENST00000506632 MAP3K9P80192 1104 aa11.19□□□□□ -0.62
PDLIM5-209ENST00000506632 VGLL4Q14135 290 aa11.19□□□□□ -0.62
PDLIM5-209ENST00000506632 TNNI3KQ59H18 835 aa11.19□□□□□ -0.62
PDLIM5-209ENST00000506632 SPTY2D1Q68D10 685 aaPredicted RBP11.19□□□□□ -0.62
PDLIM5-209ENST00000506632 CEP85Q6P2H3 762 aa11.19□□□□□ -0.62
PDLIM5-209ENST00000506632 PI16Q6UXB8 463 aa11.19□□□□□ -0.62
PDLIM5-209ENST00000506632 IFNL1Q8IU54 200 aa11.19□□□□□ -0.62
PDLIM5-209ENST00000506632 IFNLR1Q8IU57 520 aaPredicted RBP11.19□□□□□ -0.62
PDLIM5-209ENST00000506632 SPATA5Q8NB90 893 aa11.19□□□□□ -0.62
PDLIM5-209ENST00000506632 HOOK2Q96ED9 719 aa11.19□□□□□ -0.62
PDLIM5-209ENST00000506632 R3HDMLQ9H3Y0 253 aa11.19□□□□□ -0.62
PDLIM5-209ENST00000506632 ELP3Q9H9T3 547 aa11.19□□□□□ -0.62
PDLIM5-209ENST00000506632 FPGT-TNNI3KV9GXZ4 949 aa11.19□□□□□ -0.62
PDLIM5-209ENST00000506632 ATRNL1Q5VV63 1379 aa11.18□□□□□ -0.62
PDLIM5-209ENST00000506632 GPR25O00155 361 aa11.18□□□□□ -0.62
PDLIM5-209ENST00000506632 SURF6O75683 361 aaKnown RBP11.18□□□□□ -0.62
PDLIM5-209ENST00000506632 DGKZQ13574 1117 aa11.18□□□□□ -0.62
PDLIM5-209ENST00000506632 ZNF296Q8WUU4 475 aaPredicted RBP11.18□□□□□ -0.62
PDLIM5-209ENST00000506632 OPTNQ96CV9 577 aa11.18□□□□□ -0.62
PDLIM5-209ENST00000506632 MS4A4AQ96JQ5 239 aa11.18□□□□□ -0.62
PDLIM5-209ENST00000506632 IDI2Q9BXS1 227 aa11.18□□□□□ -0.62
PDLIM5-209ENST00000506632 USP40Q9NVE5 1235 aa11.18□□□□□ -0.62
PDLIM5-209ENST00000506632 ABCF2Q9UG63 623 aa11.18□□□□□ -0.62
PDLIM5-209ENST00000506632 ZNF112Q9UJU3 913 aa11.18□□□□□ -0.62
PDLIM5-209ENST00000506632 SNCAIPQ9Y6H5 919 aa11.18□□□□□ -0.62
PDLIM5-209ENST00000506632 MROH7-TTC4A0A0A0MT08 1334 aa11.17□□□□□ -0.62
PDLIM5-209ENST00000506632 GPR75-ASB3A0A0A6YYF3 556 aa11.17□□□□□ -0.62
PDLIM5-209ENST00000506632 SPDYE5A6NIY4 337 aa11.17□□□□□ -0.62
PDLIM5-209ENST00000506632 ENTPD3O75355 529 aa11.17□□□□□ -0.62
PDLIM5-209ENST00000506632 UQCRFS1P1P0C7P4 283 aa11.17□□□□□ -0.62
PDLIM5-209ENST00000506632 MS4A1P11836 297 aa11.17□□□□□ -0.62
PDLIM5-209ENST00000506632 MECOMQ03112 1051 aa11.17□□□□□ -0.62
PDLIM5-209ENST00000506632 GORABQ5T7V8 394 aa11.17□□□□□ -0.62
PDLIM5-209ENST00000506632 DCAF15Q66K64 600 aa11.17□□□□□ -0.62
PDLIM5-209ENST00000506632 ERICH6Q7L0X2 663 aa11.17□□□□□ -0.62
PDLIM5-209ENST00000506632 CTU1Q7Z7A3 348 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-209ENST00000506632 DZIP1Q86YF9 867 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-209ENST00000506632 ZFPM1Q8IX07 1006 aa11.17□□□□□ -0.62
PDLIM5-209ENST00000506632 SLF2Q8IX21 1173 aa11.17□□□□□ -0.62
PDLIM5-209ENST00000506632 ZNF512BQ96KM6 892 aaPredicted RBP11.17□□□□□ -0.62
PDLIM5-209ENST00000506632 WRNIP1Q96S55 665 aa11.17□□□□□ -0.62
PDLIM5-209ENST00000506632 PTPN18Q99952 460 aa11.17□□□□□ -0.62
PDLIM5-209ENST00000506632 DBNDD2Q9BQY9 259 aa11.17□□□□□ -0.62
PDLIM5-209ENST00000506632 RCAN3Q9UKA8 241 aa11.17□□□□□ -0.62
PDLIM5-209ENST00000506632 WDHD1O75717 1129 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-209ENST00000506632 BTDP43251 543 aa11.16□□□□□ -0.62
PDLIM5-209ENST00000506632 RGS3P49796 1198 aa11.16□□□□□ -0.62
PDLIM5-209ENST00000506632 RHBDL3P58872 404 aa11.16□□□□□ -0.62
PDLIM5-209ENST00000506632 TCP10Q12799 353 aa11.16□□□□□ -0.62
PDLIM5-209ENST00000506632 OS9Q13438 667 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-209ENST00000506632 TBC1D9Q6ZT07 1266 aa11.16□□□□□ -0.62
PDLIM5-209ENST00000506632 SH3BP5LQ7L8J4 393 aa11.16□□□□□ -0.62
PDLIM5-209ENST00000506632 ERO1BQ86YB8 467 aa11.16□□□□□ -0.62
PDLIM5-209ENST00000506632 ZKSCAN4Q969J2 545 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-209ENST00000506632 NSUN4Q96CB9 384 aaKnown RBP11.16□□□□□ -0.62
PDLIM5-209ENST00000506632 ZNF341Q9BYN7 854 aa11.16□□□□□ -0.62
PDLIM5-209ENST00000506632 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-209ENST00000506632 DBNLQ9UJU6 430 aaKnown RBP11.16□□□□□ -0.62
PDLIM5-209ENST00000506632 CSADQ9Y600 493 aa11.16□□□□□ -0.62
PDLIM5-209ENST00000506632 DOCK2Q92608 1830 aa11.16□□□□□ -0.62
PDLIM5-209ENST00000506632 FKTNO75072 461 aa11.15□□□□□ -0.62
PDLIM5-209ENST00000506632 MAP4K4O95819 1239 aaPredicted RBP11.15□□□□□ -0.62
PDLIM5-209ENST00000506632 INPP5BP32019 993 aa11.15□□□□□ -0.62
PDLIM5-209ENST00000506632 GTF2A2P52657 109 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms