RNA–Protein interactions for RNA: ENST00000504015.2

ALYREF-201, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 254 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-201ENST00000504015 ZNF335Q9H4Z2 1342 aaPredicted RBP4.51□□□□□ -1.69
ALYREF-201ENST00000504015 ZNF532Q9HCE3 1301 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 COL16A1Q07092 1604 aaPredicted RBP4.51□□□□□ -1.69
ALYREF-201ENST00000504015 BCORQ6W2J9 1755 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 SEMA3EO15041 775 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 ZBTB43O43298 467 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 CUTAO60888 179 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 CHGBP05060 677 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 APPP05067 770 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 SLC3A2P08195 630 aaKnown RBP4.51□□□□□ -1.69
ALYREF-201ENST00000504015 PDE6AP16499 860 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 IFNAR1P17181 557 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 U2AF2P26368 475 aaKnown RBP eCLIP4.51□□□□□ -1.698e-6■■■■□ 25
ALYREF-201ENST00000504015 IGHMBP2P38935 993 aaKnown RBP4.51□□□□□ -1.69
ALYREF-201ENST00000504015 IARSP41252 1262 aaKnown RBP4.51□□□□□ -1.69
ALYREF-201ENST00000504015 METAP2P50579 478 aaKnown RBP eCLIP4.51□□□□□ -1.69
ALYREF-201ENST00000504015 ANTXR2P58335 489 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 KIF23Q02241 960 aaPredicted RBP4.51□□□□□ -1.69
ALYREF-201ENST00000504015 SAFBQ15424 915 aaKnown RBP eCLIP4.51□□□□□ -1.69
ALYREF-201ENST00000504015 CCDC152Q4G0S7 254 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 CT47A1Q5JQC4 288 aaPredicted RBP4.51□□□□□ -1.69
ALYREF-201ENST00000504015 AKNAD1Q5T1N1 836 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 ANO1Q5XXA6 986 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 KANK3Q6NY19 840 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 APOA5Q6Q788 366 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 CLEC4GQ6UXB4 293 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 CCDC186Q7Z3E2 898 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 IFNL3Q8IZI9 196 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 IGDCC4Q8TDY8 1250 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 STAG1Q8WVM7 1258 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 UBE2Q2Q8WVN8 375 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 SMARCC1Q92922 1105 aaPredicted RBP4.51□□□□□ -1.69
ALYREF-201ENST00000504015 AIDAQ96BJ3 306 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 CCDC34Q96HJ3 373 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 MPHOSPH8Q99549 860 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 ALG1Q9BT22 464 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 UTP14AQ9BVJ6 771 aaKnown RBP4.51□□□□□ -1.69
ALYREF-201ENST00000504015 NAPBQ9H115 298 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 DNAJC25Q9H1X3 360 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 CCDC87Q9NVE4 849 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 GNL3LQ9NVN8 582 aaKnown RBP4.51□□□□□ -1.69
ALYREF-201ENST00000504015 CLIP2Q9UDT6 1046 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 ANAPC4Q9UJX5 808 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 NAP1L2Q9ULW6 460 aaPredicted RBP4.51□□□□□ -1.69
ALYREF-201ENST00000504015 ZNF652Q9Y2D9 606 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 CCDC9Q9Y3X0 531 aaKnown RBP4.51□□□□□ -1.69
ALYREF-201ENST00000504015 PHLPP1O60346 1717 aa4.51□□□□□ -1.69
ALYREF-201ENST00000504015 CHD4Q14839 1912 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 NRAPQ86VF7 1730 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 ERICH2A1L162 156 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 CCDC69A6NI79 296 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 CCP110O43303 1012 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 CBFA2T2O43439 604 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 IDH1O75874 414 aaKnown RBP4.5□□□□□ -1.69
ALYREF-201ENST00000504015 ZNF202O95125 648 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 DEXIO95424 95 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 FMNL1O95466 1100 aaPredicted RBP4.5□□□□□ -1.69
ALYREF-201ENST00000504015 CALM1P0DP23 149 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 CALM2P0DP24 149 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 CALM3P0DP25 149 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 PTGS1P23219 599 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 GPTP24298 496 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 PHKA1P46020 1223 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 NDUFA8P51970 172 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 NLRP12P59046 1061 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 HAND2P61296 217 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 CEBPZQ03701 1054 aaKnown RBP4.5□□□□□ -1.69
ALYREF-201ENST00000504015 SSRP1Q08945 709 aaKnown RBP4.5□□□□□ -1.69
ALYREF-201ENST00000504015 UBE4AQ14139 1066 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 NTRK3Q16288 839 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 DDB1Q16531 1140 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 SLFNL1Q499Z3 407 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 RILPL1Q5EBL4 403 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 TMEM67Q5HYA8 995 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 AXDND1Q5T1B0 1012 aaPredicted RBP4.5□□□□□ -1.69
ALYREF-201ENST00000504015 INTS5Q6P9B9 1019 aaKnown RBP4.5□□□□□ -1.69
ALYREF-201ENST00000504015 NFXL1Q6ZNB6 911 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 MFSD6Q6ZSS7 791 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 BARGINQ6ZT62 677 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 CYB5R4Q7L1T6 521 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 CHST3Q7LGC8 479 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 LRRC8AQ8IWT6 810 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 TRIM22Q8IYM9 498 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 ZNF579Q8NAF0 562 aaKnown RBP4.5□□□□□ -1.69
ALYREF-201ENST00000504015 SPC24Q8NBT2 197 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 CCDC150Q8NCX0 1101 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 ZNF830Q96NB3 372 aaPredicted RBP4.5□□□□□ -1.69
ALYREF-201ENST00000504015 SLC4A9Q96Q91 983 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 NBPF3Q9H094 633 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 OSBPL5Q9H0X9 879 aaPredicted RBP4.5□□□□□ -1.69
ALYREF-201ENST00000504015 FOXP1Q9H334 677 aaPredicted RBP4.5□□□□□ -1.69
ALYREF-201ENST00000504015 KCNF1Q9H3M0 494 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 GOLPH3LQ9H4A5 285 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 LY9Q9HBG7 655 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 PIH1D3Q9NQM4 214 aaKnown RBP4.5□□□□□ -1.69
ALYREF-201ENST00000504015 ZSWIM5Q9P217 1185 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 TUBE1Q9UJT0 475 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 CEP131Q9UPN4 1083 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 HPSEQ9Y251 543 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 ZBTB1Q9Y2K1 713 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms