RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 ZNF532Q9HCE3 1301 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 SPTLC2O15270 562 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 CPA1P15085 419 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 SCRN1Q12765 414 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 RESTQ13127 1097 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 VPS72Q15906 364 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 MEX3CQ5U5Q3 659 aaKnown RBP8.55□□□□□ -1.04
PDGFC-203ENST00000502773 CCDC129Q6ZRS4 1044 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 CDC37L1Q7L3B6 337 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 FBXO18Q8NFZ0 1043 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 SLC4A4Q9Y6R1 1079 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 ATRNO75882 1429 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 KDM4FA0A1W2PPD8 638 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 DEXIO95424 95 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 ZNF165P49910 485 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 RTN1Q16799 776 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 SGMS1Q86VZ5 419 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 WDR66Q8TBY9 1149 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 ALG1Q9BT22 464 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 NUTM2BA6NNL0 878 aaPredicted RBP8.54□□□□□ -1.04
PDGFC-203ENST00000502773 NUTM2EB1AL46 878 aaPredicted RBP8.54□□□□□ -1.04
PDGFC-203ENST00000502773 PPP6R2O75170 966 aa8.54□□□□□ -1.04
PDGFC-203ENST00000502773 SMC2O95347 1197 aa8.54□□□□□ -1.04
PDGFC-203ENST00000502773 ADCY5O95622 1261 aa8.54□□□□□ -1.04
PDGFC-203ENST00000502773 CYP7A1P22680 504 aa8.54□□□□□ -1.04
PDGFC-203ENST00000502773 CCT2P78371 535 aaKnown RBP8.54□□□□□ -1.04
PDGFC-203ENST00000502773 SLC10A5Q5PT55 438 aa8.54□□□□□ -1.04
PDGFC-203ENST00000502773 NBPF5PQ86XG9 351 aaPredicted RBP8.54□□□□□ -1.04
PDGFC-203ENST00000502773 NUTM2AQ8IVF1 878 aaPredicted RBP8.54□□□□□ -1.04
PDGFC-203ENST00000502773 FSIP1Q8NA03 581 aa8.54□□□□□ -1.04
PDGFC-203ENST00000502773 UBR2Q8IWV8 1755 aa8.54□□□□□ -1.04
PDGFC-203ENST00000502773 RPS6KA4O75676 772 aa8.54□□□□□ -1.04
PDGFC-203ENST00000502773 RBM6P78332 1123 aaKnown RBP8.54□□□□□ -1.04
PDGFC-203ENST00000502773 MB21D2Q8IYB1 491 aaPredicted RBP8.54□□□□□ -1.04
PDGFC-203ENST00000502773 ELOA2Q8IYF1 753 aaPredicted RBP8.54□□□□□ -1.04
PDGFC-203ENST00000502773 IFNL3Q8IZI9 196 aa8.54□□□□□ -1.04
PDGFC-203ENST00000502773 MAGEB6Q8N7X4 407 aa8.54□□□□□ -1.04
PDGFC-203ENST00000502773 ANKRD20A12PQ8NF67 263 aa8.54□□□□□ -1.04
PDGFC-203ENST00000502773 CTCFLQ8NI51 663 aaPredicted RBP8.54□□□□□ -1.04
PDGFC-203ENST00000502773 GDPD2Q9HCC8 539 aa8.54□□□□□ -1.04
PDGFC-203ENST00000502773 PAPPAQ13219 1627 aa8.54□□□□□ -1.04
PDGFC-203ENST00000502773 CUTAO60888 179 aa8.54□□□□□ -1.04
PDGFC-203ENST00000502773 CDC25BP30305 580 aa8.54□□□□□ -1.04
PDGFC-203ENST00000502773 HOXA7P31268 230 aaPredicted RBP8.54□□□□□ -1.04
PDGFC-203ENST00000502773 TXLNAP40222 546 aa8.54□□□□□ -1.04
PDGFC-203ENST00000502773 EDC3Q96F86 508 aaKnown RBP8.54□□□□□ -1.04
PDGFC-203ENST00000502773 IL25Q9H293 177 aa8.54□□□□□ -1.04
PDGFC-203ENST00000502773 LEMD3Q9Y2U8 911 aa8.54□□□□□ -1.04
PDGFC-203ENST00000502773 CALML3P27482 149 aa8.54□□□□□ -1.04
PDGFC-203ENST00000502773 ZNF804AQ7Z570 1209 aa8.54□□□□□ -1.04
PDGFC-203ENST00000502773 CCDC12Q8WUD4 166 aaPredicted RBP8.54□□□□□ -1.04
PDGFC-203ENST00000502773 STAG1Q8WVM7 1258 aa8.54□□□□□ -1.04
PDGFC-203ENST00000502773 STRBPQ96SI9 672 aaKnown RBP8.54□□□□□ -1.04
PDGFC-203ENST00000502773 BRIP1Q9BX63 1249 aa8.54□□□□□ -1.04
PDGFC-203ENST00000502773 ATP8A2Q9NTI2 1148 aa8.54□□□□□ -1.04
PDGFC-203ENST00000502773 TUBGCP6Q96RT7 1819 aa8.53□□□□□ -1.04
PDGFC-203ENST00000502773 M0R2C6 588 aa8.53□□□□□ -1.04
PDGFC-203ENST00000502773 TTC6Q86TZ1 520 aa8.53□□□□□ -1.04
PDGFC-203ENST00000502773 GOLGA6L1Q8N7Z2 621 aa8.53□□□□□ -1.04
PDGFC-203ENST00000502773 CCDC85AQ96PX6 553 aaPredicted RBP8.53□□□□□ -1.04
PDGFC-203ENST00000502773 SEC62Q99442 399 aaKnown RBP8.53□□□□□ -1.04
PDGFC-203ENST00000502773 LZTS2Q9BRK4 669 aa8.53□□□□□ -1.04
PDGFC-203ENST00000502773 TFIP11Q9UBB9 837 aaKnown RBP8.53□□□□□ -1.04
PDGFC-203ENST00000502773 TAOK2Q9UL54 1235 aa8.53□□□□□ -1.04
PDGFC-203ENST00000502773 GADD45BO75293 160 aaPredicted RBP8.53□□□□□ -1.04
PDGFC-203ENST00000502773 FGFR2P21802 821 aa8.53□□□□□ -1.04
PDGFC-203ENST00000502773 CMA1P23946 247 aa8.53□□□□□ -1.04
PDGFC-203ENST00000502773 RPS8P62241 208 aaKnown RBP8.53□□□□□ -1.04
PDGFC-203ENST00000502773 SEMA3FQ13275 785 aa8.53□□□□□ -1.04
PDGFC-203ENST00000502773 HLFQ16534 295 aa8.53□□□□□ -1.04
PDGFC-203ENST00000502773 ANO1Q5XXA6 986 aa8.53□□□□□ -1.04
PDGFC-203ENST00000502773 BCCIPQ9P287 314 aaKnown RBP eCLIP8.53□□□□□ -1.04
PDGFC-203ENST00000502773 NARFQ9UHQ1 456 aa8.53□□□□□ -1.04
PDGFC-203ENST00000502773 STRCP1A6NGW2 1772 aa8.53□□□□□ -1.04
PDGFC-203ENST00000502773 CAMTA2O94983 1202 aa8.53□□□□□ -1.04
PDGFC-203ENST00000502773 MBD4O95243 580 aa8.53□□□□□ -1.04
PDGFC-203ENST00000502773 LARGE1O95461 756 aa8.53□□□□□ -1.04
PDGFC-203ENST00000502773 TPM1P09493 284 aa8.53□□□□□ -1.04
PDGFC-203ENST00000502773 HCLS1P14317 486 aaPredicted RBP8.53□□□□□ -1.04
PDGFC-203ENST00000502773 ADORA1P30542 326 aa8.53□□□□□ -1.04
PDGFC-203ENST00000502773 RFC4P35249 363 aa8.53□□□□□ -1.04
PDGFC-203ENST00000502773 MCAMP43121 646 aa8.53□□□□□ -1.04
PDGFC-203ENST00000502773 ST5P78524 1137 aa8.53□□□□□ -1.04
PDGFC-203ENST00000502773 IMPACTQ9P2X3 320 aa8.53□□□□□ -1.04
PDGFC-203ENST00000502773 ARPP21Q9UBL0 812 aaPredicted RBP8.53□□□□□ -1.04
PDGFC-203ENST00000502773 COL22A1Q8NFW1 1626 aaPredicted RBP8.53□□□□□ -1.04
PDGFC-203ENST00000502773 SH2B2O14492 632 aaPredicted RBP8.52□□□□□ -1.04
PDGFC-203ENST00000502773 DDAH1O94760 285 aa8.52□□□□□ -1.04
PDGFC-203ENST00000502773 IFNAR1P17181 557 aa8.52□□□□□ -1.04
PDGFC-203ENST00000502773 HIBADHP31937 336 aaKnown RBP8.52□□□□□ -1.04
PDGFC-203ENST00000502773 SUSD4Q5VX71 490 aa8.52□□□□□ -1.04
PDGFC-203ENST00000502773 LARP6Q9BRS8 491 aaKnown RBP8.52□□□□□ -1.04
PDGFC-203ENST00000502773 CHRNDQ07001 517 aa8.52□□□□□ -1.05
PDGFC-203ENST00000502773 TRAPPC3LQ5T215 181 aa8.52□□□□□ -1.05
PDGFC-203ENST00000502773 GALNT17Q6IS24 598 aa8.52□□□□□ -1.05
PDGFC-203ENST00000502773 TRIM34Q9BYJ4 488 aa8.52□□□□□ -1.05
PDGFC-203ENST00000502773 FOXP1Q9H334 677 aaPredicted RBP8.52□□□□□ -1.05
PDGFC-203ENST00000502773 ABCF2Q9UG63 623 aa8.52□□□□□ -1.05
PDGFC-203ENST00000502773 HAND2P61296 217 aa8.52□□□□□ -1.05
PDGFC-203ENST00000502773 MYSM1Q5VVJ2 828 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms