RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 CLRN2A0PK11 232 aa14.01□□□□□ -0.17
UBE2D3-211ENST00000502404 EPHA10Q5JZY3 1008 aa14.01□□□□□ -0.17
UBE2D3-211ENST00000502404 FAM9BQ8IZU0 186 aa14.01□□□□□ -0.17
UBE2D3-211ENST00000502404 ZNF594Q96JF6 807 aaPredicted RBP14.01□□□□□ -0.17
UBE2D3-211ENST00000502404 PRMT6Q96LA8 375 aaPredicted RBP14.01□□□□□ -0.17
UBE2D3-211ENST00000502404 SERPINA10Q9UK55 444 aa14.01□□□□□ -0.17
UBE2D3-211ENST00000502404 FRAT2O75474 233 aaPredicted RBP14□□□□□ -0.17
UBE2D3-211ENST00000502404 TNNI2P48788 182 aa14□□□□□ -0.17
UBE2D3-211ENST00000502404 RASA3Q14644 834 aa14□□□□□ -0.17
UBE2D3-211ENST00000502404 CAVIN4Q5BKX8 364 aa14□□□□□ -0.17
UBE2D3-211ENST00000502404 MFSD14BQ5SR56 506 aa14□□□□□ -0.17
UBE2D3-211ENST00000502404 GPR153Q6NV75 609 aa14□□□□□ -0.17
UBE2D3-211ENST00000502404 ANKRD13AQ8IZ07 590 aa14□□□□□ -0.17
UBE2D3-211ENST00000502404 TDRD7Q8NHU6 1098 aaKnown RBP14□□□□□ -0.17
UBE2D3-211ENST00000502404 TTF2Q9UNY4 1162 aaKnown RBP14□□□□□ -0.17
UBE2D3-211ENST00000502404 ZNF710Q8N1W2 664 aa13.99□□□□□ -0.17
UBE2D3-211ENST00000502404 TBC1D22AQ8WUA7 517 aa13.99□□□□□ -0.17
UBE2D3-211ENST00000502404 WNK4Q96J92 1243 aa13.99□□□□□ -0.17
UBE2D3-211ENST00000502404 MLLT3P42568 568 aaPredicted RBP13.98□□□□□ -0.17
UBE2D3-211ENST00000502404 GYG1P46976 350 aa13.98□□□□□ -0.17
UBE2D3-211ENST00000502404 NBPF12Q5TAG4 269 aaPredicted RBP13.98□□□□□ -0.17
UBE2D3-211ENST00000502404 FAM84BQ96KN1 310 aaPredicted RBP13.98□□□□□ -0.17
UBE2D3-211ENST00000502404 JAG2Q9Y219 1238 aa13.98□□□□□ -0.17
UBE2D3-211ENST00000502404 USP2O75604 605 aaPredicted RBP13.97□□□□□ -0.17
UBE2D3-211ENST00000502404 WDHD1O75717 1129 aaPredicted RBP13.97□□□□□ -0.17
UBE2D3-211ENST00000502404 HDLBPQ00341 1268 aaKnown RBP13.97□□□□□ -0.17
UBE2D3-211ENST00000502404 ARHGEF6Q15052 776 aa13.97□□□□□ -0.17
UBE2D3-211ENST00000502404 METTL24Q5JXM2 366 aa13.97□□□□□ -0.17
UBE2D3-211ENST00000502404 DZIP1LQ8IYY4 767 aaKnown RBP13.97□□□□□ -0.17
UBE2D3-211ENST00000502404 HOOK2Q96ED9 719 aa13.97□□□□□ -0.17
UBE2D3-211ENST00000502404 ERO1AQ96HE7 468 aa13.97□□□□□ -0.17
UBE2D3-211ENST00000502404 SUCLG2Q96I99 432 aa13.97□□□□□ -0.17
UBE2D3-211ENST00000502404 ZNF70Q9UC06 446 aaPredicted RBP13.97□□□□□ -0.17
UBE2D3-211ENST00000502404 RIPOR2Q9Y4F9 1068 aa13.97□□□□□ -0.17
UBE2D3-211ENST00000502404 UTYO14607 1347 aa13.96□□□□□ -0.17
UBE2D3-211ENST00000502404 PTPRCP08575 1304 aa13.96□□□□□ -0.17
UBE2D3-211ENST00000502404 PDE4DIPQ5VU43 2346 aa13.96□□□□□ -0.17
UBE2D3-211ENST00000502404 TULP1O00294 542 aaPredicted RBP13.96□□□□□ -0.17
UBE2D3-211ENST00000502404 ARSIQ5FYB1 569 aa13.96□□□□□ -0.17
UBE2D3-211ENST00000502404 INTS3Q68E01 1043 aaKnown RBP13.96□□□□□ -0.17
UBE2D3-211ENST00000502404 SMYD5Q6GMV2 418 aa13.96□□□□□ -0.17
UBE2D3-211ENST00000502404 CLMNQ96JQ2 1002 aa13.96□□□□□ -0.17
UBE2D3-211ENST00000502404 TDRD3Q9H7E2 651 aaKnown RBP13.96□□□□□ -0.17
UBE2D3-211ENST00000502404 TMOD2Q9NZR1 351 aa13.96□□□□□ -0.17
UBE2D3-211ENST00000502404 FZD1Q9UP38 647 aa13.96□□□□□ -0.17
UBE2D3-211ENST00000502404 PCDHAC2Q9Y5I4 1007 aa13.96□□□□□ -0.17
UBE2D3-211ENST00000502404 ZNF646O15015 1829 aaPredicted RBP13.95□□□□□ -0.18
UBE2D3-211ENST00000502404 NBPF7P0C2Y1 421 aaPredicted RBP13.95□□□□□ -0.18
UBE2D3-211ENST00000502404 CRKP46108 304 aa13.95□□□□□ -0.18
UBE2D3-211ENST00000502404 RABL6Q3YEC7 729 aaPredicted RBP13.95□□□□□ -0.18
UBE2D3-211ENST00000502404 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.95□□□□□ -0.18
UBE2D3-211ENST00000502404 FBXO33Q7Z6M2 555 aa13.95□□□□□ -0.18
UBE2D3-211ENST00000502404 MRIQ9BWK5 157 aa13.95□□□□□ -0.18
UBE2D3-211ENST00000502404 PUS3Q9BZE2 481 aaKnown RBP13.95□□□□□ -0.18
UBE2D3-211ENST00000502404 BICC1Q9H694 974 aaKnown RBP13.95□□□□□ -0.18
UBE2D3-211ENST00000502404 SUGT1Q9Y2Z0 365 aa13.95□□□□□ -0.18
UBE2D3-211ENST00000502404 TRIM17Q9Y577 477 aa13.95□□□□□ -0.18
UBE2D3-211ENST00000502404 CSADQ9Y600 493 aa13.95□□□□□ -0.18
UBE2D3-211ENST00000502404 MAST3O60307 1309 aa13.94□□□□□ -0.18
UBE2D3-211ENST00000502404 E9PSI1 815 aa13.94□□□□□ -0.18
UBE2D3-211ENST00000502404 PDE8BO95263 885 aa13.94□□□□□ -0.18
UBE2D3-211ENST00000502404 IFIT1P09914 478 aaKnown RBP13.94□□□□□ -0.18
UBE2D3-211ENST00000502404 CHAF1AQ13111 956 aaPredicted RBP13.94□□□□□ -0.18
UBE2D3-211ENST00000502404 PRPF38BQ5VTL8 546 aaKnown RBP13.94□□□□□ -0.18
UBE2D3-211ENST00000502404 TEKT1Q969V4 418 aa13.94□□□□□ -0.18
UBE2D3-211ENST00000502404 KAZALD1Q96I82 304 aa13.94□□□□□ -0.18
UBE2D3-211ENST00000502404 R3HDMLQ9H3Y0 253 aa13.94□□□□□ -0.18
UBE2D3-211ENST00000502404 TCP10L2B9ZVM9 353 aa13.93□□□□□ -0.18
UBE2D3-211ENST00000502404 IGF2BP3O00425 579 aaKnown RBP eCLIP13.93□□□□□ -0.18
UBE2D3-211ENST00000502404 HOXB1P14653 301 aaPredicted RBP13.93□□□□□ -0.18
UBE2D3-211ENST00000502404 GTF2A2P52657 109 aa13.93□□□□□ -0.18
UBE2D3-211ENST00000502404 MRPL50Q8N5N7 158 aaKnown RBP13.93□□□□□ -0.18
UBE2D3-211ENST00000502404 KHSRPQ92945 711 aaKnown RBP eCLIP13.93□□□□□ -0.183e-7■■■□□ 18.3
UBE2D3-211ENST00000502404 OPTNQ96CV9 577 aa13.93□□□□□ -0.18
UBE2D3-211ENST00000502404 ELP3Q9H9T3 547 aa13.93□□□□□ -0.18
UBE2D3-211ENST00000502404 HDAC5Q9UQL6 1122 aa13.93□□□□□ -0.18
UBE2D3-211ENST00000502404 NUDT7P0C024 238 aa13.92□□□□□ -0.18
UBE2D3-211ENST00000502404 SP3Q02447 781 aa13.92□□□□□ -0.18
UBE2D3-211ENST00000502404 PUM3Q15397 648 aaKnown RBP13.92□□□□□ -0.18
UBE2D3-211ENST00000502404 FKBP1CQ5VVH2 108 aa13.92□□□□□ -0.18
UBE2D3-211ENST00000502404 OTOP1Q7RTM1 612 aa13.92□□□□□ -0.18
UBE2D3-211ENST00000502404 EFCC1Q9HA90 598 aa13.92□□□□□ -0.18
UBE2D3-211ENST00000502404 ZFYVE28Q9HCC9 887 aa13.92□□□□□ -0.18
UBE2D3-211ENST00000502404 SSC5DA1L4H1 1573 aa13.92□□□□□ -0.18
UBE2D3-211ENST00000502404 KIF16BQ96L93 1317 aa13.91□□□□□ -0.18
UBE2D3-211ENST00000502404 CRHR2Q13324 411 aa13.91□□□□□ -0.18
UBE2D3-211ENST00000502404 LRRC24Q50LG9 513 aa13.91□□□□□ -0.18
UBE2D3-211ENST00000502404 DCAF15Q66K64 600 aa13.91□□□□□ -0.18
UBE2D3-211ENST00000502404 FAM83AQ86UY5 434 aa13.91□□□□□ -0.18
UBE2D3-211ENST00000502404 ZDHHC15Q96MV8 337 aa13.91□□□□□ -0.18
UBE2D3-211ENST00000502404 TEPSINQ96N21 525 aa13.91□□□□□ -0.18
UBE2D3-211ENST00000502404 TMEM39BQ9GZU3 492 aa13.91□□□□□ -0.18
UBE2D3-211ENST00000502404 PCDH10Q9P2E7 1040 aa13.91□□□□□ -0.18
UBE2D3-211ENST00000502404 IQSEC3Q9UPP2 1182 aaPredicted RBP13.91□□□□□ -0.18
UBE2D3-211ENST00000502404 ECM29Q5VYK3 1845 aa13.91□□□□□ -0.18
UBE2D3-211ENST00000502404 ZNF521Q96K83 1311 aa13.9□□□□□ -0.18
UBE2D3-211ENST00000502404 SLC5A1P13866 664 aa13.9□□□□□ -0.18
UBE2D3-211ENST00000502404 GJA5P36382 358 aa13.9□□□□□ -0.18
UBE2D3-211ENST00000502404 BCAMP50895 628 aa13.9□□□□□ -0.18
UBE2D3-211ENST00000502404 ALDH1L2Q3SY69 923 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms