RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 A0A1W2PPZ6 126 aa6.5□□□□□ -1.37
PHC3-216ENST00000497171 METTL12A8MUP2 240 aa6.5□□□□□ -1.37
PHC3-216ENST00000497171 SEZ6L2Q6UXD5 910 aa6.5□□□□□ -1.37
PHC3-216ENST00000497171 GSX1Q9H4S2 264 aaPredicted RBP6.5□□□□□ -1.37
PHC3-216ENST00000497171 LATS2Q9NRM7 1088 aa6.5□□□□□ -1.37
PHC3-216ENST00000497171 POLIQ9UNA4 740 aa6.5□□□□□ -1.37
PHC3-216ENST00000497171 FAM87AP0C7U9 286 aa6.49□□□□□ -1.37
PHC3-216ENST00000497171 KCNMB1Q16558 191 aa6.49□□□□□ -1.37
PHC3-216ENST00000497171 ZSWIM9Q86XI8 627 aa6.49□□□□□ -1.37
PHC3-216ENST00000497171 WFDC3Q8IUB2 231 aa6.49□□□□□ -1.37
PHC3-216ENST00000497171 FAM181AQ8N9Y4 354 aa6.49□□□□□ -1.37
PHC3-216ENST00000497171 MKNK2Q9HBH9 465 aa6.49□□□□□ -1.37
PHC3-216ENST00000497171 FOXD3Q9UJU5 478 aaPredicted RBP6.49□□□□□ -1.37
PHC3-216ENST00000497171 TMEM265A0A087WTH1 108 aa6.48□□□□□ -1.37
PHC3-216ENST00000497171 DYNC1LI2O43237 492 aaPredicted RBP6.48□□□□□ -1.37
PHC3-216ENST00000497171 AOC2O75106 756 aa6.48□□□□□ -1.37
PHC3-216ENST00000497171 MPSTP25325 297 aa6.48□□□□□ -1.37
PHC3-216ENST00000497171 AOC3Q16853 763 aa6.48□□□□□ -1.37
PHC3-216ENST00000497171 PEAR1Q5VY43 1037 aaPredicted RBP6.48□□□□□ -1.37
PHC3-216ENST00000497171 SLC23A3Q6PIS1 610 aa6.48□□□□□ -1.37
PHC3-216ENST00000497171 ATXN3LQ9H3M9 355 aa6.48□□□□□ -1.37
PHC3-216ENST00000497171 LIN7BQ9HAP6 207 aa6.48□□□□□ -1.37
PHC3-216ENST00000497171 ADAMTS6Q9UKP5 1117 aa6.48□□□□□ -1.37
PHC3-216ENST00000497171 SYNGAP1Q96PV0 1343 aa6.48□□□□□ -1.37
PHC3-216ENST00000497171 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.47□□□□□ -1.37
PHC3-216ENST00000497171 CDK5R2Q13319 367 aa6.47□□□□□ -1.37
PHC3-216ENST00000497171 AP3B2Q13367 1082 aa6.47□□□□□ -1.37
PHC3-216ENST00000497171 MLANAQ16655 118 aa6.47□□□□□ -1.37
PHC3-216ENST00000497171 ZNF423Q2M1K9 1284 aa6.47□□□□□ -1.37
PHC3-216ENST00000497171 CCNJLQ8IV13 435 aa6.47□□□□□ -1.37
PHC3-216ENST00000497171 FLAD1Q8NFF5 587 aa6.47□□□□□ -1.37
PHC3-216ENST00000497171 CCER1Q8TC90 406 aaPredicted RBP6.47□□□□□ -1.37
PHC3-216ENST00000497171 TSPAN15O95858 294 aa6.46□□□□□ -1.38
PHC3-216ENST00000497171 CEACAM5P06731 702 aa6.46□□□□□ -1.38
PHC3-216ENST00000497171 CTSBP07858 339 aa6.46□□□□□ -1.38
PHC3-216ENST00000497171 SLFN14P0C7P3 912 aa6.46□□□□□ -1.38
PHC3-216ENST00000497171 MESP2Q0VG99 397 aa6.46□□□□□ -1.38
PHC3-216ENST00000497171 LILRA6Q6PI73 481 aa6.46□□□□□ -1.38
PHC3-216ENST00000497171 B3GALT4O96024 378 aa6.45□□□□□ -1.38
PHC3-216ENST00000497171 ZNF865P0CJ78 1059 aaPredicted RBP6.45□□□□□ -1.38
PHC3-216ENST00000497171 ANKLE2Q86XL3 938 aa6.45□□□□□ -1.38
PHC3-216ENST00000497171 LRRC56Q8IYG6 542 aaPredicted RBP6.45□□□□□ -1.38
PHC3-216ENST00000497171 WDR18Q9BV38 432 aa6.45□□□□□ -1.38
PHC3-216ENST00000497171 ZFYVE28Q9HCC9 887 aa6.45□□□□□ -1.38
PHC3-216ENST00000497171 SUPT5HO00267 1087 aaKnown RBP6.44□□□□□ -1.38
PHC3-216ENST00000497171 FAM13AO94988 1023 aa6.44□□□□□ -1.38
PHC3-216ENST00000497171 CD96P40200 585 aa6.44□□□□□ -1.38
PHC3-216ENST00000497171 SMYD4Q8IYR2 804 aaPredicted RBP6.44□□□□□ -1.38
PHC3-216ENST00000497171 GTF3C2Q8WUA4 911 aaPredicted RBP6.44□□□□□ -1.38
PHC3-216ENST00000497171 TRIM56Q9BRZ2 755 aaKnown RBP6.44□□□□□ -1.38
PHC3-216ENST00000497171 MTMR7Q9Y216 660 aa6.44□□□□□ -1.38
PHC3-216ENST00000497171 PRRG2O14669 202 aa6.43□□□□□ -1.38
PHC3-216ENST00000497171 RNGTTO60942 597 aaKnown RBP6.43□□□□□ -1.38
PHC3-216ENST00000497171 POLR3DP05423 398 aaPredicted RBP6.43□□□□□ -1.38
PHC3-216ENST00000497171 GRIA4P48058 902 aa6.43□□□□□ -1.38
PHC3-216ENST00000497171 ID3Q02535 119 aa6.43□□□□□ -1.38
PHC3-216ENST00000497171 SPRED3Q2MJR0 410 aa6.43□□□□□ -1.38
PHC3-216ENST00000497171 MPZL3Q6UWV2 235 aa6.43□□□□□ -1.38
PHC3-216ENST00000497171 SIAH1Q8IUQ4 282 aa6.43□□□□□ -1.38
PHC3-216ENST00000497171 KRTAP4-5Q9BYR2 181 aa6.43□□□□□ -1.38
PHC3-216ENST00000497171 PPP1R9AQ9ULJ8 1098 aa6.43□□□□□ -1.38
PHC3-216ENST00000497171 NCANO14594 1321 aa6.43□□□□□ -1.38
PHC3-216ENST00000497171 A0A1W2PP55 124 aa6.42□□□□□ -1.38
PHC3-216ENST00000497171 B8ZZF3 427 aa6.42□□□□□ -1.38
PHC3-216ENST00000497171 TMPRSS2O15393 492 aa6.42□□□□□ -1.38
PHC3-216ENST00000497171 ECEL1O95672 775 aa6.42□□□□□ -1.38
PHC3-216ENST00000497171 NEFLP07196 543 aa6.42□□□□□ -1.38
PHC3-216ENST00000497171 ITIH2P19823 946 aa6.42□□□□□ -1.38
PHC3-216ENST00000497171 IKZF1Q13422 519 aa6.42□□□□□ -1.38
PHC3-216ENST00000497171 GALNT12Q8IXK2 581 aa6.42□□□□□ -1.38
PHC3-216ENST00000497171 ASB11Q8WXH4 323 aa6.42□□□□□ -1.38
PHC3-216ENST00000497171 PBXIP1Q96AQ6 731 aa6.42□□□□□ -1.38
PHC3-216ENST00000497171 SSU72Q9NP77 194 aaKnown RBP6.42□□□□□ -1.38
PHC3-216ENST00000497171 CRIM1Q9NZV1 1036 aa6.42□□□□□ -1.38
PHC3-216ENST00000497171 SNX11Q9Y5W9 270 aa6.42□□□□□ -1.38
PHC3-216ENST00000497171 ZSCAN22P10073 491 aaPredicted RBP6.41□□□□□ -1.38
PHC3-216ENST00000497171 CFPP27918 469 aa6.41□□□□□ -1.38
PHC3-216ENST00000497171 AFMP43652 599 aa6.41□□□□□ -1.38
PHC3-216ENST00000497171 TCF12Q99081 682 aa6.41□□□□□ -1.38
PHC3-216ENST00000497171 ZNF576Q9H609 170 aa6.41□□□□□ -1.38
PHC3-216ENST00000497171 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.41□□□□□ -1.38
PHC3-216ENST00000497171 NFIBO00712 420 aa6.4□□□□□ -1.38
PHC3-216ENST00000497171 OXCT1P55809 520 aa6.4□□□□□ -1.38
PHC3-216ENST00000497171 SYDE1Q6ZW31 735 aaPredicted RBP6.4□□□□□ -1.38
PHC3-216ENST00000497171 FANCD2OSQ96PS1 177 aa6.4□□□□□ -1.38
PHC3-216ENST00000497171 EHD4Q9H223 541 aa6.4□□□□□ -1.38
PHC3-216ENST00000497171 PCOLCE2Q9UKZ9 415 aa6.4□□□□□ -1.38
PHC3-216ENST00000497171 ZNF503-AS2A6NEH8 195 aa6.39□□□□□ -1.39
PHC3-216ENST00000497171 KRTAP9-7A8MTY7 169 aa6.39□□□□□ -1.39
PHC3-216ENST00000497171 LIG1P18858 919 aa6.39□□□□□ -1.39
PHC3-216ENST00000497171 SRPK2P78362 688 aaKnown RBP6.39□□□□□ -1.39
PHC3-216ENST00000497171 ZP2Q05996 745 aa6.39□□□□□ -1.39
PHC3-216ENST00000497171 GJD3Q8N144 294 aa6.39□□□□□ -1.39
PHC3-216ENST00000497171 DUSP23Q9BVJ7 150 aa6.39□□□□□ -1.39
PHC3-216ENST00000497171 SLAIN2Q9P270 581 aa6.39□□□□□ -1.39
PHC3-216ENST00000497171 GTF2IRD1Q9UHL9 959 aa6.39□□□□□ -1.39
PHC3-216ENST00000497171 RAPGEFL1Q9UHV5 662 aa6.39□□□□□ -1.39
PHC3-216ENST00000497171 PTPN12Q05209 780 aaKnown RBP6.38□□□□□ -1.39
PHC3-216ENST00000497171 SF3B2Q13435 895 aaKnown RBP6.38□□□□□ -1.39
PHC3-216ENST00000497171 MTMR3Q13615 1198 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms