RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 WDR18Q9BV38 432 aa7.06□□□□□ -1.28
CLK1-214ENST00000496205 ADAMTS6Q9UKP5 1117 aa7.06□□□□□ -1.28
CLK1-214ENST00000496205 U3KQE9 123 aa7.06□□□□□ -1.28
CLK1-214ENST00000496205 BIN1O00499 593 aa7.05□□□□□ -1.28
CLK1-214ENST00000496205 B3GALT4O96024 378 aa7.05□□□□□ -1.28
CLK1-214ENST00000496205 CD96P40200 585 aa7.05□□□□□ -1.28
CLK1-214ENST00000496205 FBLN7Q53RD9 439 aa7.05□□□□□ -1.28
CLK1-214ENST00000496205 SPOCD1Q6ZMY3 1216 aa7.05□□□□□ -1.28
CLK1-214ENST00000496205 ATG4DQ86TL0 474 aaPredicted RBP7.05□□□□□ -1.28
CLK1-214ENST00000496205 STK11IPQ8N1F8 1099 aa7.05□□□□□ -1.28
CLK1-214ENST00000496205 FAM181AQ8N9Y4 354 aa7.05□□□□□ -1.28
CLK1-214ENST00000496205 CCDC97Q96F63 343 aaPredicted RBP7.05□□□□□ -1.28
CLK1-214ENST00000496205 CORO1BQ9BR76 489 aa7.05□□□□□ -1.28
CLK1-214ENST00000496205 MBNL3Q9NUK0 354 aaKnown RBP7.05□□□□□ -1.28
CLK1-214ENST00000496205 SERPINA10Q9UK55 444 aa7.05□□□□□ -1.28
CLK1-214ENST00000496205 FAM13AO94988 1023 aa7.04□□□□□ -1.28
CLK1-214ENST00000496205 RNASE1P07998 156 aaKnown RBP7.04□□□□□ -1.28
CLK1-214ENST00000496205 FUT4P22083 530 aa7.04□□□□□ -1.28
CLK1-214ENST00000496205 CDK5R2Q13319 367 aa7.04□□□□□ -1.28
CLK1-214ENST00000496205 HP1BP3Q5SSJ5 553 aaPredicted RBP7.04□□□□□ -1.28
CLK1-214ENST00000496205 USPL1Q5W0Q7 1092 aa7.04□□□□□ -1.28
CLK1-214ENST00000496205 TMEM88BA6NKF7 163 aa7.03□□□□□ -1.28
CLK1-214ENST00000496205 FARP2O94887 1054 aaPredicted RBP7.03□□□□□ -1.28
CLK1-214ENST00000496205 CYP27C1Q4G0S4 372 aa7.03□□□□□ -1.28
CLK1-214ENST00000496205 NETO1Q8TDF5 533 aa7.03□□□□□ -1.28
CLK1-214ENST00000496205 FAM168AQ92567 244 aa7.03□□□□□ -1.28
CLK1-214ENST00000496205 MISP3Q96FF7 219 aa7.03□□□□□ -1.28
CLK1-214ENST00000496205 WDR89Q96FK6 387 aaPredicted RBP7.03□□□□□ -1.28
CLK1-214ENST00000496205 ZNF576Q9H609 170 aa7.03□□□□□ -1.28
CLK1-214ENST00000496205 RC3H2Q9HBD1 1191 aaKnown RBP7.03□□□□□ -1.28
CLK1-214ENST00000496205 ZFYVE1Q9HBF4 777 aa7.03□□□□□ -1.28
CLK1-214ENST00000496205 FAM87AP0C7U9 286 aa7.02□□□□□ -1.29
CLK1-214ENST00000496205 PDE3AQ14432 1141 aa7.02□□□□□ -1.29
CLK1-214ENST00000496205 ANO2Q9NQ90 1003 aa7.02□□□□□ -1.29
CLK1-214ENST00000496205 TMPRSS2O15393 492 aa7.01□□□□□ -1.29
CLK1-214ENST00000496205 LIG1P18858 919 aa7.01□□□□□ -1.29
CLK1-214ENST00000496205 FKBP4Q02790 459 aaKnown RBP eCLIP7.01□□□□□ -1.29
CLK1-214ENST00000496205 KIAA0319Q5VV43 1072 aa7.01□□□□□ -1.29
CLK1-214ENST00000496205 PHLDB3Q6NSJ2 640 aa7.01□□□□□ -1.29
CLK1-214ENST00000496205 LRRN4CLQ8ND94 238 aa7.01□□□□□ -1.29
CLK1-214ENST00000496205 CRIM1Q9NZV1 1036 aa7.01□□□□□ -1.29
CLK1-214ENST00000496205 SYNGAP1Q96PV0 1343 aa7.01□□□□□ -1.29
CLK1-214ENST00000496205 ITPKAP23677 461 aa7□□□□□ -1.29
CLK1-214ENST00000496205 VAV3Q9UKW4 847 aa7□□□□□ -1.29
CLK1-214ENST00000496205 KRTAP9-7A8MTY7 169 aa6.99□□□□□ -1.29
CLK1-214ENST00000496205 LEFTY1O75610 366 aa6.99□□□□□ -1.29
CLK1-214ENST00000496205 PRKCQQ04759 706 aa6.99□□□□□ -1.29
CLK1-214ENST00000496205 TRIM26Q12899 539 aaPredicted RBP6.99□□□□□ -1.29
CLK1-214ENST00000496205 SF3B2Q13435 895 aaKnown RBP6.99□□□□□ -1.29
CLK1-214ENST00000496205 PI4K2BQ8TCG2 481 aa6.99□□□□□ -1.29
CLK1-214ENST00000496205 DDX54Q8TDD1 881 aaKnown RBP6.99□□□□□ -1.29
CLK1-214ENST00000496205 TMEM40Q8WWA1 233 aa6.99□□□□□ -1.29
CLK1-214ENST00000496205 FANCD2OSQ96PS1 177 aa6.99□□□□□ -1.29
CLK1-214ENST00000496205 CCDC86Q9H6F5 360 aaKnown RBP6.99□□□□□ -1.29
CLK1-214ENST00000496205 PLAGL2Q9UPG8 496 aa6.99□□□□□ -1.29
CLK1-214ENST00000496205 MESP2Q0VG99 397 aa6.98□□□□□ -1.29
CLK1-214ENST00000496205 ZNF211Q13398 564 aaPredicted RBP6.98□□□□□ -1.29
CLK1-214ENST00000496205 ZC3H12CQ9C0D7 883 aaKnown RBP6.98□□□□□ -1.29
CLK1-214ENST00000496205 DISC1Q9NRI5 854 aa6.98□□□□□ -1.29
CLK1-214ENST00000496205 ZNF862O60290 1169 aa6.97□□□□□ -1.29
CLK1-214ENST00000496205 ABL1P00519 1130 aa6.97□□□□□ -1.29
CLK1-214ENST00000496205 ZNF157P51786 506 aaPredicted RBP6.97□□□□□ -1.29
CLK1-214ENST00000496205 OXCT1P55809 520 aa6.97□□□□□ -1.29
CLK1-214ENST00000496205 AOC3Q16853 763 aa6.97□□□□□ -1.29
CLK1-214ENST00000496205 KSR1Q8IVT5 923 aa6.97□□□□□ -1.29
CLK1-214ENST00000496205 RETREG2Q8NC44 543 aa6.97□□□□□ -1.29
CLK1-214ENST00000496205 EHD4Q9H223 541 aa6.97□□□□□ -1.29
CLK1-214ENST00000496205 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.97□□□□□ -1.29
CLK1-214ENST00000496205 CARNS1A5YM72 827 aa6.96□□□□□ -1.3
CLK1-214ENST00000496205 FAAP100Q0VG06 881 aa6.96□□□□□ -1.3
CLK1-214ENST00000496205 AP3B2Q13367 1082 aa6.96□□□□□ -1.3
CLK1-214ENST00000496205 PKN1Q16512 942 aa6.96□□□□□ -1.3
CLK1-214ENST00000496205 CILP2Q8IUL8 1156 aa6.96□□□□□ -1.3
CLK1-214ENST00000496205 SMYD4Q8IYR2 804 aaPredicted RBP6.96□□□□□ -1.3
CLK1-214ENST00000496205 KRTAP4-11Q9BYQ6 195 aa6.96□□□□□ -1.3
CLK1-214ENST00000496205 PIDD1Q9HB75 910 aa6.96□□□□□ -1.3
CLK1-214ENST00000496205 PCDHGC5Q9Y5F6 944 aa6.96□□□□□ -1.3
CLK1-214ENST00000496205 ID3Q02535 119 aa6.95□□□□□ -1.3
CLK1-214ENST00000496205 ORC1Q13415 861 aa6.95□□□□□ -1.3
CLK1-214ENST00000496205 TTLL4Q14679 1199 aa6.95□□□□□ -1.3
CLK1-214ENST00000496205 IFI16Q16666 785 aaKnown RBP6.95□□□□□ -1.3
CLK1-214ENST00000496205 DUSP23Q9BVJ7 150 aa6.95□□□□□ -1.3
CLK1-214ENST00000496205 ATXN3LQ9H3M9 355 aa6.95□□□□□ -1.3
CLK1-214ENST00000496205 ABCB6Q9NP58 842 aa6.95□□□□□ -1.3
CLK1-214ENST00000496205 NPHS2Q9NP85 383 aa6.95□□□□□ -1.3
CLK1-214ENST00000496205 PRDM7Q9NQW5 492 aa6.95□□□□□ -1.3
CLK1-214ENST00000496205 CEACAM5P06731 702 aa6.94□□□□□ -1.3
CLK1-214ENST00000496205 HCLS1P14317 486 aaPredicted RBP6.94□□□□□ -1.3
CLK1-214ENST00000496205 PTPN12Q05209 780 aaKnown RBP6.94□□□□□ -1.3
CLK1-214ENST00000496205 ECM1Q16610 540 aa6.94□□□□□ -1.3
CLK1-214ENST00000496205 HRASLS5Q96KN8 279 aa6.94□□□□□ -1.3
CLK1-214ENST00000496205 MKNK2Q9HBH9 465 aa6.94□□□□□ -1.3
CLK1-214ENST00000496205 ZNF503-AS2A6NEH8 195 aa6.93□□□□□ -1.3
CLK1-214ENST00000496205 RNGTTO60942 597 aaKnown RBP6.93□□□□□ -1.3
CLK1-214ENST00000496205 SLFN14P0C7P3 912 aa6.93□□□□□ -1.3
CLK1-214ENST00000496205 KIF4BQ2VIQ3 1234 aa6.93□□□□□ -1.3
CLK1-214ENST00000496205 NEFMP07197 916 aa6.92□□□□□ -1.3
CLK1-214ENST00000496205 SLC23A3Q6PIS1 610 aa6.92□□□□□ -1.3
CLK1-214ENST00000496205 FAM84AQ96KN4 292 aa6.92□□□□□ -1.3
CLK1-214ENST00000496205 HEXIM2Q96MH2 286 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms